RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 LETM1O95202 739 aaPredicted RBP14.82□□□□□ -0.04
LIG1-218ENST00000599322 GNA15P30679 374 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 GRIA2P42262 883 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 HARS2P49590 506 aaKnown RBP14.82□□□□□ -0.04
LIG1-218ENST00000599322 BPIFB4P59827 614 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 PTK2Q05397 1052 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 KCNJ12Q14500 433 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 E2F5Q15329 346 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 SCD5Q86SK9 330 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 KIAA2013Q8IYS2 634 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 DCLK2Q8N568 766 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 CAMKK1Q8N5S9 505 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 SUMF1Q8NBK3 374 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 ZBTB44Q8NCP5 570 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 RPLP0P6Q8NHW5 317 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 ENOX1Q8TC92 643 aaKnown RBP14.82□□□□□ -0.04
LIG1-218ENST00000599322 IRGQQ8WZA9 623 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 RMDN1Q96DB5 314 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 ZFRQ96KR1 1074 aaKnown RBP14.82□□□□□ -0.04
LIG1-218ENST00000599322 NOX5Q96PH1 765 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 BBS2Q9BXC9 721 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 PDCL3Q9H2J4 239 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 OSER1Q9NX31 292 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 NCDNQ9UBB6 729 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 CEP83Q9Y592 693 aa14.82□□□□□ -0.04
LIG1-218ENST00000599322 RNF225M0QZC1 329 aaPredicted RBP14.81□□□□□ -0.04
LIG1-218ENST00000599322 MDM4O15151 490 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 HOXC11O43248 304 aaPredicted RBP14.81□□□□□ -0.04
LIG1-218ENST00000599322 ALDH1A2O94788 518 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 KAT7O95251 611 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 HMBSP08397 361 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 SLC9A1P19634 815 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 HOXA6P31267 233 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 TNFRSF4P43489 277 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 RGS7P49802 495 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 MRPS21P82921 87 aaKnown RBP14.81□□□□□ -0.04
LIG1-218ENST00000599322 GAS6Q14393 721 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 STX1AQ16623 288 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 MEA1Q16626 185 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 HSF5Q4G112 596 aaPredicted RBP14.81□□□□□ -0.04
LIG1-218ENST00000599322 FKBP15Q5T1M5 1219 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 CCDC183Q5T5S1 534 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 BSPRYQ5W0U4 402 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 HEATR6Q6AI08 1181 aaKnown RBP14.81□□□□□ -0.04
LIG1-218ENST00000599322 SDE2Q6IQ49 451 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 CEP68Q76N32 757 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 TRMT11Q7Z4G4 463 aaKnown RBP14.81□□□□□ -0.04
LIG1-218ENST00000599322 IRF2BP1Q8IU81 584 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 SCML4Q8N228 414 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 SLC35F5Q8WV83 523 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 TFAP2BQ92481 460 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 RUBCNQ92622 972 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 PLD4Q96BZ4 506 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 KREMEN1Q96MU8 473 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 NAT10Q9H0A0 1025 aaKnown RBP14.81□□□□□ -0.04
LIG1-218ENST00000599322 FBRSL1Q9HCM7 1045 aaKnown RBP14.81□□□□□ -0.04
LIG1-218ENST00000599322 GMEB2Q9UKD1 530 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 CNTN6Q9UQ52 1028 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 HBS1LQ9Y450 684 aaKnown RBP14.81□□□□□ -0.04
LIG1-218ENST00000599322 NFE2L3Q9Y4A8 694 aa14.81□□□□□ -0.04
LIG1-218ENST00000599322 HELZP42694 1942 aaKnown RBP14.8□□□□□ -0.04
LIG1-218ENST00000599322 NEDD8-MDP1E9PL57 170 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 CAPN9O14815 690 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 CDK11BP21127 795 aaKnown RBP14.8□□□□□ -0.04
LIG1-218ENST00000599322 PON1P27169 355 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 KRT9P35527 623 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 OPRD1P41143 372 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 FNTBP49356 437 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 PGFP49763 221 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 ZNF132P52740 706 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 SEC13P55735 322 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 C2orf27AQ580R0 203 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 HSP90AA4PQ58FG1 418 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 GRAMD4Q6IC98 578 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 PRR23BQ6ZRT6 265 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 TPGS1Q6ZTW0 290 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 SYT13Q7L8C5 426 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 TMEM25Q86YD3 366 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 GPR161Q8N6U8 529 aaKnown RBP14.8□□□□□ -0.04
LIG1-218ENST00000599322 NAT16Q8N8M0 369 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 GPT2Q8TD30 523 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 ZNF606Q8WXB4 792 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 NELL1Q92832 810 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 MIS12Q9H081 205 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 DNAJC12Q9UKB3 198 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 RALGAPA1Q6GYQ0 2036 aa14.8□□□□□ -0.04
LIG1-218ENST00000599322 CCDC163A0A0D9SF12 145 aa14.79□□□□□ -0.04
LIG1-218ENST00000599322 TULP2O00295 520 aa14.79□□□□□ -0.04
LIG1-218ENST00000599322 STC2O76061 302 aa14.79□□□□□ -0.04
LIG1-218ENST00000599322 APBB3O95704 486 aa14.79□□□□□ -0.04
LIG1-218ENST00000599322 CORO1AP31146 461 aaKnown RBP14.79□□□□□ -0.04
LIG1-218ENST00000599322 SLC6A11P48066 632 aa14.79□□□□□ -0.04
LIG1-218ENST00000599322 DAOAP59103 153 aa14.79□□□□□ -0.04
LIG1-218ENST00000599322 ZNF445P59923 1031 aa14.79□□□□□ -0.04
LIG1-218ENST00000599322 KDSRQ06136 332 aa14.79□□□□□ -0.04
LIG1-218ENST00000599322 SIM2Q14190 667 aaPredicted RBP14.79□□□□□ -0.04
LIG1-218ENST00000599322 DMC1Q14565 340 aa14.79□□□□□ -0.04
LIG1-218ENST00000599322 PKDCCQ504Y2 493 aa14.79□□□□□ -0.04
LIG1-218ENST00000599322 TCP11X2Q5H9J9 407 aa14.79□□□□□ -0.04
LIG1-218ENST00000599322 EOGTQ5NDL2 527 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms