RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 RXFP1Q9HBX9 757 aa24.32■■□□□ 1.48
SYMPK-212ENST00000598896 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.32■■□□□ 1.48
SYMPK-212ENST00000598896 GMIPQ9P107 970 aa24.32■■□□□ 1.48
SYMPK-212ENST00000598896 CEP290O15078 2479 aa24.32■■□□□ 1.48
SYMPK-212ENST00000598896 hCG_1818297A0A087WSY0 165 aa24.32■■□□□ 1.48
SYMPK-212ENST00000598896 CCDC188H7C350 402 aa24.32■■□□□ 1.48
SYMPK-212ENST00000598896 MDM4O15151 490 aa24.32■■□□□ 1.48
SYMPK-212ENST00000598896 CNPP09543 421 aaKnown RBP24.32■■□□□ 1.48
SYMPK-212ENST00000598896 TUFMP49411 452 aaKnown RBP24.32■■□□□ 1.48
SYMPK-212ENST00000598896 COPS2P61201 443 aa24.32■■□□□ 1.48
SYMPK-212ENST00000598896 DEUP1Q05D60 604 aa24.32■■□□□ 1.48
SYMPK-212ENST00000598896 ODF2Q5BJF6 829 aa24.32■■□□□ 1.48
SYMPK-212ENST00000598896 TFDP3Q5H9I0 405 aa24.32■■□□□ 1.48
SYMPK-212ENST00000598896 PGAP3Q96FM1 320 aaPredicted RBP24.32■■□□□ 1.48
SYMPK-212ENST00000598896 MAGEB5Q9BZ81 275 aa24.32■■□□□ 1.48
SYMPK-212ENST00000598896 WDR6Q9NNW5 1121 aaKnown RBP24.32■■□□□ 1.48
SYMPK-212ENST00000598896 ABCC13Q9NSE7 274 aa24.32■■□□□ 1.48
SYMPK-212ENST00000598896 MTUS1Q9ULD2 1270 aa24.32■■□□□ 1.48
SYMPK-212ENST00000598896 NR2E3Q9Y5X4 410 aa24.32■■□□□ 1.48
SYMPK-212ENST00000598896 CSPG5O95196 566 aa24.31■■□□□ 1.48
SYMPK-212ENST00000598896 RTN3O95197 1032 aaPredicted RBP24.31■■□□□ 1.48
SYMPK-212ENST00000598896 DNAJB1P25685 340 aa24.31■■□□□ 1.48
SYMPK-212ENST00000598896 YWHAQP27348 245 aa24.31■■□□□ 1.48
SYMPK-212ENST00000598896 CA8P35219 290 aa24.31■■□□□ 1.48
SYMPK-212ENST00000598896 PTPN7P35236 360 aa24.31■■□□□ 1.48
SYMPK-212ENST00000598896 ERVFC1P60507 584 aa24.31■■□□□ 1.48
SYMPK-212ENST00000598896 TAZQ16635 292 aa24.31■■□□□ 1.48
SYMPK-212ENST00000598896 KAZNQ674X7 775 aa24.31■■□□□ 1.48
SYMPK-212ENST00000598896 TMC7Q7Z402 723 aa24.31■■□□□ 1.48
SYMPK-212ENST00000598896 TAC4Q86UU9 113 aa24.31■■□□□ 1.48
SYMPK-212ENST00000598896 MON1AQ86VX9 555 aa24.31■■□□□ 1.48
SYMPK-212ENST00000598896 KCTD6Q8NC69 237 aa24.31■■□□□ 1.48
SYMPK-212ENST00000598896 DQX1Q8TE96 717 aaKnown RBP24.31■■□□□ 1.48
SYMPK-212ENST00000598896 TMPRSS4Q9NRS4 437 aa24.31■■□□□ 1.48
SYMPK-212ENST00000598896 DDIT4Q9NX09 232 aa24.31■■□□□ 1.48
SYMPK-212ENST00000598896 HSFX1Q9UBD0 423 aa24.31■■□□□ 1.48
SYMPK-212ENST00000598896 SLC38A8A6NNN8 435 aa24.3■■□□□ 1.48
SYMPK-212ENST00000598896 CDH6P55285 790 aa24.3■■□□□ 1.48
SYMPK-212ENST00000598896 TUBB4BP68371 445 aa24.3■■□□□ 1.48
SYMPK-212ENST00000598896 TAF10Q12962 218 aa24.3■■□□□ 1.48
SYMPK-212ENST00000598896 KCTD19Q17RG1 926 aaPredicted RBP24.3■■□□□ 1.48
SYMPK-212ENST00000598896 ERMARDQ5T6L9 678 aa24.3■■□□□ 1.48
SYMPK-212ENST00000598896 BTBD8Q5XKL5 378 aa24.3■■□□□ 1.48
SYMPK-212ENST00000598896 HDAC7Q8WUI4 952 aa24.3■■□□□ 1.48
SYMPK-212ENST00000598896 FBXO32Q969P5 355 aa24.3■■□□□ 1.48
SYMPK-212ENST00000598896 TCF25Q9BQ70 676 aa24.3■■□□□ 1.48
SYMPK-212ENST00000598896 TRIM62Q9BVG3 475 aa24.3■■□□□ 1.48
SYMPK-212ENST00000598896 RRN3Q9NYV6 651 aa24.3■■□□□ 1.48
SYMPK-212ENST00000598896 NUDT5Q9UKK9 219 aa24.3■■□□□ 1.48
SYMPK-212ENST00000598896 YIPF1Q9Y548 306 aa24.3■■□□□ 1.48
SYMPK-212ENST00000598896 GOLGA6L10A0A0M3HER8 536 aa24.3■■□□□ 1.48
SYMPK-212ENST00000598896 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.3■■□□□ 1.48
SYMPK-212ENST00000598896 CA3P07451 260 aa24.3■■□□□ 1.48
SYMPK-212ENST00000598896 MMRN1Q13201 1228 aa24.3■■□□□ 1.48
SYMPK-212ENST00000598896 PPP2R5EQ16537 467 aa24.3■■□□□ 1.48
SYMPK-212ENST00000598896 CALN1Q9BXU9 219 aa24.3■■□□□ 1.48
SYMPK-212ENST00000598896 FAM204AQ9H8W3 233 aa24.3■■□□□ 1.48
SYMPK-212ENST00000598896 LZTS1Q9Y250 596 aa24.3■■□□□ 1.48
SYMPK-212ENST00000598896 R3HDM2Q9Y2K5 976 aaKnown RBP24.3■■□□□ 1.48
SYMPK-212ENST00000598896 CDH23Q9H251 3354 aa24.29■■□□□ 1.48
SYMPK-212ENST00000598896 I6L893 689 aaPredicted RBP24.29■■□□□ 1.48
SYMPK-212ENST00000598896 CXCL14O95715 111 aa24.29■■□□□ 1.48
SYMPK-212ENST00000598896 IGLV3-25P01717 112 aa24.29■■□□□ 1.48
SYMPK-212ENST00000598896 CREMQ03060 361 aa24.29■■□□□ 1.48
SYMPK-212ENST00000598896 DPYSL3Q14195 570 aa24.29■■□□□ 1.48
SYMPK-212ENST00000598896 C8orf74Q6P047 294 aa24.29■■□□□ 1.48
SYMPK-212ENST00000598896 GPR161Q8N6U8 529 aaKnown RBP24.29■■□□□ 1.48
SYMPK-212ENST00000598896 SPPL3Q8TCT6 385 aa24.29■■□□□ 1.48
SYMPK-212ENST00000598896 PNKPQ96T60 521 aa24.29■■□□□ 1.48
SYMPK-212ENST00000598896 ANLNQ9NQW6 1124 aa24.29■■□□□ 1.48
SYMPK-212ENST00000598896 MAGED2Q9UNF1 606 aaPredicted RBP24.29■■□□□ 1.48
SYMPK-212ENST00000598896 AP4E1Q9UPM8 1137 aa24.29■■□□□ 1.48
SYMPK-212ENST00000598896 SSX2IPQ9Y2D8 614 aa24.29■■□□□ 1.48
SYMPK-212ENST00000598896 C5orf67F2Z3F1 127 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 CETN2P41208 172 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 EIF4EBP2Q13542 120 aaPredicted RBP24.28■■□□□ 1.48
SYMPK-212ENST00000598896 CYP1B1Q16678 543 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 POF1BQ8WVV4 589 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 CASP10Q92851 521 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 CEP295NLQ96MC4 621 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 TTLL2Q9BWV7 592 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 PCDH18Q9HCL0 1135 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 MTMR10Q9NXD2 777 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.28■■□□□ 1.48
SYMPK-212ENST00000598896 FZD10Q9ULW2 581 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 RWDD3Q9Y3V2 267 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 RAD51CO43502 376 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 PHF2O75151 1096 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 SPATA31D3P0C874 917 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 IL4RP24394 825 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 DPYSL2Q16555 572 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 TTC27Q6P3X3 843 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 SPATA31D4Q6ZUB0 917 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 C1orf54Q8WWF1 131 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 ATG4AQ8WYN0 398 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 SMOC2Q9H3U7 446 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 PLEKHA4Q9H4M7 779 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 DHX35Q9H5Z1 703 aaKnown RBP24.28■■□□□ 1.48
SYMPK-212ENST00000598896 COMMD8Q9NX08 183 aa24.28■■□□□ 1.48
SYMPK-212ENST00000598896 SFMBT1Q9UHJ3 866 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms