RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 NOMO3P69849 1222 aa21.05■□□□□ 0.96
IRF3-221ENST00000598808 GPC5P78333 572 aa21.05■□□□□ 0.96
IRF3-221ENST00000598808 SLC7A9P82251 487 aa21.05■□□□□ 0.96
IRF3-221ENST00000598808 GOLGA8FQ08AF8 430 aa21.05■□□□□ 0.96
IRF3-221ENST00000598808 GOLGA8DPQ0D2H9 430 aa21.05■□□□□ 0.96
IRF3-221ENST00000598808 MTF1Q14872 753 aa21.05■□□□□ 0.96
IRF3-221ENST00000598808 C2CD6Q53TS8 623 aa21.05■□□□□ 0.96
IRF3-221ENST00000598808 E4F1Q66K89 784 aaPredicted RBP21.05■□□□□ 0.96
IRF3-221ENST00000598808 FAM183BPQ6ZVS7 135 aa21.05■□□□□ 0.96
IRF3-221ENST00000598808 UBALD2Q8IYN6 164 aa21.05■□□□□ 0.96
IRF3-221ENST00000598808 HAUS4Q9H6D7 363 aa21.05■□□□□ 0.96
IRF3-221ENST00000598808 OBP2AQ9NY56 170 aa21.05■□□□□ 0.96
IRF3-221ENST00000598808 STRIP2Q9ULQ0 834 aa21.05■□□□□ 0.96
IRF3-221ENST00000598808 SH3BP1Q9Y3L3 701 aa21.05■□□□□ 0.96
IRF3-221ENST00000598808 PI4K2BG5E9Z4 385 aa21.04■□□□□ 0.96
IRF3-221ENST00000598808 OLFM2O95897 454 aa21.04■□□□□ 0.96
IRF3-221ENST00000598808 HMBSP08397 361 aa21.04■□□□□ 0.96
IRF3-221ENST00000598808 SRFP11831 508 aa21.04■□□□□ 0.96
IRF3-221ENST00000598808 NSFP46459 744 aaKnown RBP21.04■□□□□ 0.96
IRF3-221ENST00000598808 TOGARAM2Q6ZUX3 1019 aa21.04■□□□□ 0.96
IRF3-221ENST00000598808 BHLHA9Q7RTU4 235 aa21.04■□□□□ 0.96
IRF3-221ENST00000598808 IRF2BP2Q7Z5L9 587 aa21.04■□□□□ 0.96
IRF3-221ENST00000598808 TMEM110Q86TL2 294 aa21.04■□□□□ 0.96
IRF3-221ENST00000598808 DDX42Q86XP3 938 aaKnown RBP eCLIP21.04■□□□□ 0.96
IRF3-221ENST00000598808 C17orf53Q8N3J3 647 aaPredicted RBP21.04■□□□□ 0.96
IRF3-221ENST00000598808 SLC30A5Q8TAD4 765 aa21.04■□□□□ 0.96
IRF3-221ENST00000598808 ABCC13Q9NSE7 274 aa21.04■□□□□ 0.96
IRF3-221ENST00000598808 GOLGA8SH3BPF8 625 aa21.03■□□□□ 0.96
IRF3-221ENST00000598808 GRAP2O75791 330 aa21.03■□□□□ 0.96
IRF3-221ENST00000598808 NCAM1P13591 858 aa21.03■□□□□ 0.96
IRF3-221ENST00000598808 CDH5P33151 784 aaPredicted RBP21.03■□□□□ 0.96
IRF3-221ENST00000598808 IFNAR2P48551 515 aa21.03■□□□□ 0.96
IRF3-221ENST00000598808 RPL34P49207 117 aaKnown RBP21.03■□□□□ 0.96
IRF3-221ENST00000598808 ZXDAP98168 799 aa21.03■□□□□ 0.96
IRF3-221ENST00000598808 USP4Q13107 963 aa21.03■□□□□ 0.96
IRF3-221ENST00000598808 ZNF77Q15935 545 aa21.03■□□□□ 0.96
IRF3-221ENST00000598808 MMS22LQ6ZRQ5 1243 aa21.03■□□□□ 0.96
IRF3-221ENST00000598808 SCML4Q8N228 414 aa21.03■□□□□ 0.96
IRF3-221ENST00000598808 C18orf8Q96DM3 657 aa21.03■□□□□ 0.96
IRF3-221ENST00000598808 LRRC3BQ96PB8 259 aa21.03■□□□□ 0.96
IRF3-221ENST00000598808 PCDHB18PQ96TA0 734 aa21.03■□□□□ 0.96
IRF3-221ENST00000598808 C11orf70Q9BRQ4 267 aa21.03■□□□□ 0.96
IRF3-221ENST00000598808 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.03■□□□□ 0.96
IRF3-221ENST00000598808 GKN1Q9NS71 199 aa21.03■□□□□ 0.96
IRF3-221ENST00000598808 OLA1Q9NTK5 396 aaKnown RBP21.03■□□□□ 0.96
IRF3-221ENST00000598808 ZNHIT6Q9NWK9 470 aaKnown RBP21.03■□□□□ 0.96
IRF3-221ENST00000598808 AIPL1Q9NZN9 384 aa21.03■□□□□ 0.96
IRF3-221ENST00000598808 MARCH2Q9P0N8 246 aa21.03■□□□□ 0.96
IRF3-221ENST00000598808 CA14Q9ULX7 337 aa21.03■□□□□ 0.96
IRF3-221ENST00000598808 TMCO5BA8MYB1 307 aa21.02■□□□□ 0.96
IRF3-221ENST00000598808 CDK17Q00537 523 aa21.02■□□□□ 0.96
IRF3-221ENST00000598808 CLEC16AQ2KHT3 1053 aa21.02■□□□□ 0.96
IRF3-221ENST00000598808 ARHGAP29Q52LW3 1261 aa21.02■□□□□ 0.96
IRF3-221ENST00000598808 NYAP1Q6ZVC0 841 aa21.02■□□□□ 0.96
IRF3-221ENST00000598808 PHLDB2Q86SQ0 1253 aa21.02■□□□□ 0.96
IRF3-221ENST00000598808 TTC8Q8TAM2 541 aa21.02■□□□□ 0.96
IRF3-221ENST00000598808 RIN3Q8TB24 985 aa21.02■□□□□ 0.96
IRF3-221ENST00000598808 CSGALNACT1Q8TDX6 532 aa21.02■□□□□ 0.96
IRF3-221ENST00000598808 PIWIL1Q96J94 861 aaKnown RBP21.02■□□□□ 0.96
IRF3-221ENST00000598808 TRIM62Q9BVG3 475 aa21.02■□□□□ 0.96
IRF3-221ENST00000598808 LSM7Q9UK45 103 aaKnown RBP21.02■□□□□ 0.96
IRF3-221ENST00000598808 WNT6Q9Y6F9 365 aa21.02■□□□□ 0.96
IRF3-221ENST00000598808 SLC12A8A0AV02 714 aa21.01■□□□□ 0.95
IRF3-221ENST00000598808 CYP1A1P04798 512 aaPredicted RBP21.01■□□□□ 0.95
IRF3-221ENST00000598808 RNASE9P60153 205 aaKnown RBP21.01■□□□□ 0.95
IRF3-221ENST00000598808 PFKPQ01813 784 aa21.01■□□□□ 0.95
IRF3-221ENST00000598808 FAM102AQ5T9C2 384 aaPredicted RBP21.01■□□□□ 0.95
IRF3-221ENST00000598808 TRIM68Q6AZZ1 485 aa21.01■□□□□ 0.95
IRF3-221ENST00000598808 VPS36Q86VN1 386 aa21.01■□□□□ 0.95
IRF3-221ENST00000598808 IRF7Q92985 503 aa21.01■□□□□ 0.95
IRF3-221ENST00000598808 C11orf16Q9NQ32 467 aa21.01■□□□□ 0.95
IRF3-221ENST00000598808 DUS2Q9NX74 493 aaKnown RBP21.01■□□□□ 0.95
IRF3-221ENST00000598808 SFMBT1Q9UHJ3 866 aa21.01■□□□□ 0.95
IRF3-221ENST00000598808 HNRNPH3P31942 346 aaKnown RBP21.01■□□□□ 0.95
IRF3-221ENST00000598808 ZXDBP98169 803 aa21.01■□□□□ 0.95
IRF3-221ENST00000598808 FCHO2Q0JRZ9 810 aa21.01■□□□□ 0.95
IRF3-221ENST00000598808 TAF5Q15542 800 aa21.01■□□□□ 0.95
IRF3-221ENST00000598808 EFHC1Q5JVL4 640 aa21.01■□□□□ 0.95
IRF3-221ENST00000598808 ZNF571Q7Z3V5 609 aaPredicted RBP21.01■□□□□ 0.95
IRF3-221ENST00000598808 EDAQ92838 391 aa21.01■□□□□ 0.95
IRF3-221ENST00000598808 POPDC2Q9HBU9 364 aa21.01■□□□□ 0.95
IRF3-221ENST00000598808 ADAM22Q9P0K1 906 aa21.01■□□□□ 0.95
IRF3-221ENST00000598808 NAALADL1Q9UQQ1 740 aa21.01■□□□□ 0.95
IRF3-221ENST00000598808 CHADO15335 359 aa21■□□□□ 0.95
IRF3-221ENST00000598808 MSI1O43347 362 aaKnown RBP21■□□□□ 0.95
IRF3-221ENST00000598808 HSF2BPO75031 334 aa21■□□□□ 0.95
IRF3-221ENST00000598808 SERPING1P05155 500 aa21■□□□□ 0.95
IRF3-221ENST00000598808 CCDC175P0C221 793 aa21■□□□□ 0.95
IRF3-221ENST00000598808 PRKCIP41743 596 aa21■□□□□ 0.95
IRF3-221ENST00000598808 KPNA1P52294 538 aaPredicted RBP21■□□□□ 0.95
IRF3-221ENST00000598808 YWHAZP63104 245 aaKnown RBP21■□□□□ 0.95
IRF3-221ENST00000598808 SLC6A3Q01959 620 aa21■□□□□ 0.95
IRF3-221ENST00000598808 KLHDC10Q6PID8 442 aa21■□□□□ 0.95
IRF3-221ENST00000598808 OLFML1Q6UWY5 402 aa21■□□□□ 0.95
IRF3-221ENST00000598808 ZDHHC17Q8IUH5 632 aa21■□□□□ 0.95
IRF3-221ENST00000598808 ADAM32Q8TC27 787 aa21■□□□□ 0.95
IRF3-221ENST00000598808 SYN2Q92777 582 aaPredicted RBP21■□□□□ 0.95
IRF3-221ENST00000598808 ASIC4Q96FT7 647 aa21■□□□□ 0.95
IRF3-221ENST00000598808 ZFRQ96KR1 1074 aaKnown RBP21■□□□□ 0.95
IRF3-221ENST00000598808 KLF16Q9BXK1 252 aaPredicted RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms