RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 FAF2Q96CS3 445 aa17.74■□□□□ 0.43
SHKBP1-216ENST00000598201 RBM15Q96T37 977 aaKnown RBP eCLIP17.74■□□□□ 0.43
SHKBP1-216ENST00000598201 TMEM109Q9BVC6 243 aa17.74■□□□□ 0.43
SHKBP1-216ENST00000598201 ULBP1Q9BZM6 244 aa17.74■□□□□ 0.43
SHKBP1-216ENST00000598201 DHX35Q9H5Z1 703 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-216ENST00000598201 ACTN2P35609 894 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 SULT1E1P49888 294 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 GNGT1P63211 74 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 FAAP100Q0VG06 881 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 MORF4L2Q15014 288 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 SYPL2Q5VXT5 272 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 STRADAQ7RTN6 431 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 FAM131BQ86XD5 332 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 RELL1Q8IUW5 271 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 RSPH1Q8WYR4 309 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 PRCCQ92733 491 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 MYLPFQ96A32 169 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 C9orf72Q96LT7 481 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 KCTD15Q96SI1 283 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 ZNF670Q9BS34 389 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 HTATIP2Q9BUP3 242 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 AP4E1Q9UPM8 1137 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 FARP1Q9Y4F1 1045 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 TSC2P49815 1807 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 HHLA1C9JL84 531 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 M0QZQ0 153 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 APOL1O14791 398 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 INPPL1O15357 1258 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 MAP3K6O95382 1288 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 CYP11A1P05108 521 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 FYNP06241 537 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 CYP2F1P24903 491 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 PCSK1P29120 753 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 ROR1Q01973 937 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 GUCY1A3Q02108 690 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 GAD2Q05329 585 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 ANKRD22Q5VYY1 191 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 DARS2Q6PI48 645 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 LRRC31Q6UY01 552 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 ZNF280BQ86YH2 543 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 PYROXD2Q8N2H3 581 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 CPT1BQ92523 772 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 NT5C3BQ969T7 300 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 PGM2Q96G03 612 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 TMEM209Q96SK2 561 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 TMPRSS4Q9NRS4 437 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 TMLHEQ9NVH6 421 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 HEY1Q9Y5J3 304 aa17.73■□□□□ 0.43
SHKBP1-216ENST00000598201 YJEFN3A6XGL0 299 aa17.72■□□□□ 0.43
SHKBP1-216ENST00000598201 E7ENQ6 273 aa17.72■□□□□ 0.43
SHKBP1-216ENST00000598201 MAGEA4P43358 317 aa17.72■□□□□ 0.43
SHKBP1-216ENST00000598201 BCAR1P56945 870 aa17.72■□□□□ 0.43
SHKBP1-216ENST00000598201 IFI35P80217 286 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-216ENST00000598201 LONRF1Q17RB8 773 aa17.72■□□□□ 0.43
SHKBP1-216ENST00000598201 RAB41Q5JT25 222 aa17.72■□□□□ 0.43
SHKBP1-216ENST00000598201 CLLU1OSQ5K130 101 aa17.72■□□□□ 0.43
SHKBP1-216ENST00000598201 BNIPLQ7Z465 357 aa17.72■□□□□ 0.43
SHKBP1-216ENST00000598201 VSIG1Q86XK7 387 aa17.72■□□□□ 0.43
SHKBP1-216ENST00000598201 OR10T2Q8NGX3 314 aa17.72■□□□□ 0.43
SHKBP1-216ENST00000598201 LRRN4Q8WUT4 740 aa17.72■□□□□ 0.43
SHKBP1-216ENST00000598201 SLC2A13Q96QE2 648 aa17.72■□□□□ 0.43
SHKBP1-216ENST00000598201 NPY6RQ99463 290 aa17.72■□□□□ 0.43
SHKBP1-216ENST00000598201 FOXP3Q9BZS1 431 aa17.72■□□□□ 0.43
SHKBP1-216ENST00000598201 NRDE2Q9H7Z3 1164 aa17.72■□□□□ 0.43
SHKBP1-216ENST00000598201 NAALADL1Q9UQQ1 740 aa17.72■□□□□ 0.43
SHKBP1-216ENST00000598201 SYNJ2BP-COX16A0A087WUM0 186 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 RASGRF2O14827 1237 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 DDHD2O94830 711 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 TGM2P21980 687 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 NOS2P35228 1153 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 DAOAP59103 153 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 AUHQ13825 339 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 FASTKD3Q14CZ7 662 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 HP1BP3Q5SSJ5 553 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 FAM171BQ6P995 826 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 SLC24A5Q71RS6 500 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 LRRTM3Q86VH5 581 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 UROC1Q96N76 676 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 PKMYT1Q99640 499 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 ACBD6Q9BR61 282 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 USP29Q9HBJ7 922 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 SAYSD1Q9NPB0 183 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 COX16Q9P0S2 106 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 SHOC2Q9UQ13 582 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 TCRBV7S3A2A0A539 114 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 GOLGA8MH3BSY2 632 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 H7C0C1 242 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 USP17L7P0C7H9 530 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 ATP5OP48047 213 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 INTS6LQ5JSJ4 861 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 C6orf118Q5T5N4 469 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 DCLRE1AQ6PJP8 1040 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 METTL23Q86XA0 190 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 SMARCD1Q96GM5 515 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 CSPG4P5Q96PW8 444 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 POPDC2Q9HBU9 364 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 SLC12A6Q9UHW9 1150 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 FZD10Q9ULW2 581 aa17.71■□□□□ 0.43
SHKBP1-216ENST00000598201 ZNF487B1APH4 448 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 M0QYT0 321 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms