RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 C11orf74Q86VG3 221 aa15.96■□□□□ 0.15
TGFB1-202ENST00000597453 MIB1Q86YT6 1006 aa15.96■□□□□ 0.15
TGFB1-202ENST00000597453 ZNF513Q8N8E2 541 aaPredicted RBP15.96■□□□□ 0.15
TGFB1-202ENST00000597453 TRIML1Q8N9V2 468 aa15.96■□□□□ 0.15
TGFB1-202ENST00000597453 CCDC150Q8NCX0 1101 aa15.96■□□□□ 0.15
TGFB1-202ENST00000597453 HMGB4Q8WW32 186 aa15.96■□□□□ 0.15
TGFB1-202ENST00000597453 ARID3AQ99856 593 aa15.96■□□□□ 0.15
TGFB1-202ENST00000597453 DUSP16Q9BY84 665 aa15.96■□□□□ 0.15
TGFB1-202ENST00000597453 CLSTN2Q9H4D0 955 aa15.96■□□□□ 0.15
TGFB1-202ENST00000597453 POLMQ9NP87 494 aaPredicted RBP15.96■□□□□ 0.15
TGFB1-202ENST00000597453 KIAA1468Q9P260 1216 aa15.96■□□□□ 0.15
TGFB1-202ENST00000597453 PI4KAP42356 2102 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 KMT2BQ9UMN6 2715 aaPredicted RBP15.95■□□□□ 0.14
TGFB1-202ENST00000597453 TCRBV21S2A2A0A5A6 115 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 NEDD8-MDP1E9PL57 170 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 GOLGA6L22H0YM25 854 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 PSMA7O14818 248 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 BMP6P22004 513 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 P2RY2P41231 377 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 LRRC63Q05C16 580 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 CAMK4Q16566 473 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 RNF43Q68DV7 783 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 ISM2Q6H9L7 571 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 KLHDC10Q6PID8 442 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 TPGS1Q6ZTW0 290 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 CCDC186Q7Z3E2 898 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 FBXL13Q8NEE6 735 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 DDX1Q92499 740 aaKnown RBP15.95■□□□□ 0.14
TGFB1-202ENST00000597453 P2RY11Q96G91 374 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 TSG101Q99816 390 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 EDEM2Q9BV94 578 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 BBS2Q9BXC9 721 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 CISHQ9NSE2 258 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 DNAJC17Q9NVM6 304 aaKnown RBP15.95■□□□□ 0.14
TGFB1-202ENST00000597453 MARK1Q9P0L2 795 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 BCCIPQ9P287 314 aaKnown RBP eCLIP15.95■□□□□ 0.14
TGFB1-202ENST00000597453 MBD1Q9UIS9 605 aaPredicted RBP15.95■□□□□ 0.14
TGFB1-202ENST00000597453 NAGPAQ9UK23 515 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 USP3Q9Y6I4 520 aa15.95■□□□□ 0.14
TGFB1-202ENST00000597453 LNP1A1A4G5 178 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 PATE3B3GLJ2 98 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 CETN3O15182 167 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 CACNG3O60359 315 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 TYRP14679 529 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 WASP42768 502 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 DHPSP49366 369 aaPredicted RBP15.94■□□□□ 0.14
TGFB1-202ENST00000597453 RAD23BP54727 409 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 MAP7D1Q3KQU3 841 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 CBWD6Q4V339 395 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 CBWD3Q5JTY5 395 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 CBWD5Q5RIA9 395 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 C10orf120Q5SQS8 335 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 EGFLAMQ63HQ2 1017 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 GRAMD4Q6IC98 578 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 Q6ZNB5 142 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 TOGARAM2Q6ZUX3 1019 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 CYP2U1Q7Z449 544 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 ZC3H3Q8IXZ2 948 aaKnown RBP15.94■□□□□ 0.14
TGFB1-202ENST00000597453 SLC4A11Q8NBS3 891 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 TATDN2Q93075 761 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 DHTKD1Q96HY7 919 aaPredicted RBP15.94■□□□□ 0.14
TGFB1-202ENST00000597453 HEXIM2Q96MH2 286 aaKnown RBP15.94■□□□□ 0.14
TGFB1-202ENST00000597453 RAB20Q9NX57 234 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 DNMT3LQ9UJW3 386 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 LSM7Q9UK45 103 aaKnown RBP15.94■□□□□ 0.14
TGFB1-202ENST00000597453 STARD13Q9Y3M8 1113 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 CEP295Q9C0D2 2601 aa15.94■□□□□ 0.14
TGFB1-202ENST00000597453 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.93■□□□□ 0.14
TGFB1-202ENST00000597453 BIN1O00499 593 aa15.93■□□□□ 0.14
TGFB1-202ENST00000597453 STC2O76061 302 aa15.93■□□□□ 0.14
TGFB1-202ENST00000597453 EPB41P11171 864 aaKnown RBP15.93■□□□□ 0.14
TGFB1-202ENST00000597453 CD44P16070 742 aaKnown RBP15.93■□□□□ 0.14
TGFB1-202ENST00000597453 PLA2G4AP47712 749 aa15.93■□□□□ 0.14
TGFB1-202ENST00000597453 PMS1P54277 932 aaKnown RBP15.93■□□□□ 0.14
TGFB1-202ENST00000597453 FKBP3Q00688 224 aaKnown RBP15.93■□□□□ 0.14
TGFB1-202ENST00000597453 GOLGA8FQ08AF8 430 aa15.93■□□□□ 0.14
TGFB1-202ENST00000597453 GOLGA8DPQ0D2H9 430 aa15.93■□□□□ 0.14
TGFB1-202ENST00000597453 PREPLQ4J6C6 727 aaPredicted RBP15.93■□□□□ 0.14
TGFB1-202ENST00000597453 DCAF17Q5H9S7 520 aaPredicted RBP15.93■□□□□ 0.14
TGFB1-202ENST00000597453 ANKRD40Q6AI12 368 aa15.93■□□□□ 0.14
TGFB1-202ENST00000597453 FOXR2Q6PJQ5 311 aa15.93■□□□□ 0.14
TGFB1-202ENST00000597453 ARMCX6Q7L4S7 300 aa15.93■□□□□ 0.14
TGFB1-202ENST00000597453 TMEFF1Q8IYR6 380 aa15.93■□□□□ 0.14
TGFB1-202ENST00000597453 PGBD3Q8N328 593 aa15.93■□□□□ 0.14
TGFB1-202ENST00000597453 KCNV2Q8TDN2 545 aa15.93■□□□□ 0.14
TGFB1-202ENST00000597453 TMEM176AQ96HP8 235 aa15.93■□□□□ 0.14
TGFB1-202ENST00000597453 ACOX2Q99424 681 aa15.93■□□□□ 0.14
TGFB1-202ENST00000597453 LSM14BQ9BX40 385 aaKnown RBP15.93■□□□□ 0.14
TGFB1-202ENST00000597453 CLIC5Q9NZA1 410 aa15.93■□□□□ 0.14
TGFB1-202ENST00000597453 ASCC3Q8N3C0 2202 aaKnown RBP15.92■□□□□ 0.14
TGFB1-202ENST00000597453 A0A1W2PQF6 199 aa15.92■□□□□ 0.14
TGFB1-202ENST00000597453 TRIM49BA6NDI0 452 aa15.92■□□□□ 0.14
TGFB1-202ENST00000597453 C4orf47A7E2U8 309 aa15.92■□□□□ 0.14
TGFB1-202ENST00000597453 PPP1R3GB7ZBB8 358 aa15.92■□□□□ 0.14
TGFB1-202ENST00000597453 PRRT4C9JH25 899 aa15.92■□□□□ 0.14
TGFB1-202ENST00000597453 KHNYNO15037 678 aaKnown RBP15.92■□□□□ 0.14
TGFB1-202ENST00000597453 SLC16A3O15427 465 aaKnown RBP15.92■□□□□ 0.14
TGFB1-202ENST00000597453 KLKB1P03952 638 aa15.92■□□□□ 0.14
TGFB1-202ENST00000597453 CISD3P0C7P0 127 aa15.92■□□□□ 0.14
TGFB1-202ENST00000597453 HOXB2P14652 356 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms