RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 PM20D1Q6GTS8 502 aa15.86■□□□□ 0.13
TRIM28-205ENST00000595028 RHBDF2Q6PJF5 856 aa15.86■□□□□ 0.13
TRIM28-205ENST00000595028 ENOSF1Q7L5Y1 443 aa15.86■□□□□ 0.13
TRIM28-205ENST00000595028 BHLHA9Q7RTU4 235 aa15.86■□□□□ 0.13
TRIM28-205ENST00000595028 UBA3Q8TBC4 463 aa15.86■□□□□ 0.13
TRIM28-205ENST00000595028 ATRIPQ8WXE1 791 aa15.86■□□□□ 0.13
TRIM28-205ENST00000595028 KCTD13Q8WZ19 329 aa15.86■□□□□ 0.13
TRIM28-205ENST00000595028 SECISBP2LQ93073 1101 aaKnown RBP15.86■□□□□ 0.13
TRIM28-205ENST00000595028 LSM7Q9UK45 103 aaKnown RBP15.86■□□□□ 0.13
TRIM28-205ENST00000595028 CHURC1-FNTBB4DL54 471 aa15.85■□□□□ 0.13
TRIM28-205ENST00000595028 LILRB5O75023 590 aa15.85■□□□□ 0.13
TRIM28-205ENST00000595028 CALCAP01258 141 aa15.85■□□□□ 0.13
TRIM28-205ENST00000595028 KRT5P13647 590 aa15.85■□□□□ 0.13
TRIM28-205ENST00000595028 TGM1P22735 817 aa15.85■□□□□ 0.13
TRIM28-205ENST00000595028 EIF2DP41214 584 aaKnown RBP15.85■□□□□ 0.13
TRIM28-205ENST00000595028 NRLP54845 237 aa15.85■□□□□ 0.13
TRIM28-205ENST00000595028 YWHAGP61981 247 aaKnown RBP eCLIP15.85■□□□□ 0.13
TRIM28-205ENST00000595028 CNGA2Q16280 664 aa15.85■□□□□ 0.13
TRIM28-205ENST00000595028 EXOC3L4Q17RC7 722 aa15.85■□□□□ 0.13
TRIM28-205ENST00000595028 HTR3DQ70Z44 454 aa15.85■□□□□ 0.13
TRIM28-205ENST00000595028 C12orf40Q86WS4 652 aa15.85■□□□□ 0.13
TRIM28-205ENST00000595028 MIB1Q86YT6 1006 aa15.85■□□□□ 0.13
TRIM28-205ENST00000595028 SIX6OS1Q8N1H7 587 aa15.85■□□□□ 0.13
TRIM28-205ENST00000595028 FAM81BQ96LP2 452 aa15.85■□□□□ 0.13
TRIM28-205ENST00000595028 UBE2TQ9NPD8 197 aaPredicted RBP15.85■□□□□ 0.13
TRIM28-205ENST00000595028 APEX2Q9UBZ4 518 aa15.85■□□□□ 0.13
TRIM28-205ENST00000595028 RASAL2Q9UJF2 1139 aa15.85■□□□□ 0.13
TRIM28-205ENST00000595028 USP18Q9UMW8 372 aa15.85■□□□□ 0.13
TRIM28-205ENST00000595028 SMG5Q9UPR3 1016 aaKnown RBP15.85■□□□□ 0.13
TRIM28-205ENST00000595028 HOXC11O43248 304 aaPredicted RBP15.84■□□□□ 0.13
TRIM28-205ENST00000595028 ATG13O75143 517 aa15.84■□□□□ 0.13
TRIM28-205ENST00000595028 SLC9A1P19634 815 aa15.84■□□□□ 0.13
TRIM28-205ENST00000595028 MFAP3P55082 362 aa15.84■□□□□ 0.13
TRIM28-205ENST00000595028 APBA1Q02410 837 aa15.84■□□□□ 0.13
TRIM28-205ENST00000595028 GAD2Q05329 585 aa15.84■□□□□ 0.13
TRIM28-205ENST00000595028 EFEMP1Q12805 493 aa15.84■□□□□ 0.13
TRIM28-205ENST00000595028 GJB7Q6PEY0 223 aa15.84■□□□□ 0.13
TRIM28-205ENST00000595028 Q6ZNB5 142 aa15.84■□□□□ 0.13
TRIM28-205ENST00000595028 SLC35F5Q8WV83 523 aa15.84■□□□□ 0.13
TRIM28-205ENST00000595028 CNGB3Q9NQW8 809 aa15.84■□□□□ 0.13
TRIM28-205ENST00000595028 SPHK2Q9NRA0 654 aa15.84■□□□□ 0.13
TRIM28-205ENST00000595028 CEP295Q9C0D2 2601 aa15.84■□□□□ 0.13
TRIM28-205ENST00000595028 ZZEF1O43149 2961 aa15.84■□□□□ 0.13
TRIM28-205ENST00000595028 PKD1L2Q7Z442 2459 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.83■□□□□ 0.12
TRIM28-205ENST00000595028 STC2O76061 302 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 MBD3O95983 291 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 PRKCSHP14314 528 aaPredicted RBP15.83■□□□□ 0.12
TRIM28-205ENST00000595028 PON1P27169 355 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 RGS7P49802 495 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 DAOAP59103 153 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 MEA1Q16626 185 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 HSP90AA4PQ58FG1 418 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 PPM1JQ5JR12 505 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 MIIPQ5JXC2 388 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 BTBD8Q5XKL5 378 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 PMF1Q6P1K2 205 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 RSRC2Q7L4I2 434 aaKnown RBP15.83■□□□□ 0.12
TRIM28-205ENST00000595028 ETFBKMTQ8IXQ9 262 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 SCML4Q8N228 414 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 RPLP0P6Q8NHW5 317 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 CCDC26Q8TAB7 109 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 NDRG1Q92597 394 aaKnown RBP15.83■□□□□ 0.12
TRIM28-205ENST00000595028 ACDQ96AP0 544 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 PNKPQ96T60 521 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 TUBGCP2Q9BSJ2 902 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 EPC1Q9H2F5 836 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 PARD6AQ9NPB6 346 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 MARK1Q9P0L2 795 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 MARCH2Q9P0N8 246 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 SPAG17Q6Q759 2223 aa15.83■□□□□ 0.12
TRIM28-205ENST00000595028 EML5Q05BV3 1969 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 FASNP49327 2511 aaKnown RBP15.82■□□□□ 0.12
TRIM28-205ENST00000595028 YJEFN3A6XGL0 299 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 BECN2A8MW95 431 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 KCNJ18B7U540 433 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 E7ENQ6 273 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 GABBR2O75899 941 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 KAT7O95251 611 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 LCP1P13796 627 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 EEF1GP26641 437 aaKnown RBP15.82■□□□□ 0.12
TRIM28-205ENST00000595028 HOXA6P31267 233 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 SLC6A11P48066 632 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 FNTBP49356 437 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 COG7P83436 770 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 KDSRQ06136 332 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 DMWDQ09019 674 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 MESP2Q0VG99 397 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 KCNJ12Q14500 433 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 ANO4Q32M45 955 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 VWA3BQ502W6 1294 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 TMEM25Q86YD3 366 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 PHTF2Q8N3S3 785 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 SHC3Q92529 594 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 HSFY1Q96LI6 401 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 NDST4Q9H3R1 872 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 SIX2Q9NPC8 291 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 ARHGEF4Q9NR80 690 aa15.82■□□□□ 0.12
TRIM28-205ENST00000595028 SAMSN1Q9NSI8 373 aaKnown RBP15.82■□□□□ 0.12
TRIM28-205ENST00000595028 OLA1Q9NTK5 396 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms