RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CPA2P48052 419 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 RAB27AP51159 221 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 TMEM132BQ14DG7 1078 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 BOLA3Q53S33 107 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 SLC9A4Q6AI14 798 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 WDR75Q8IWA0 830 aaKnown RBP13.73□□□□□ -0.21
VRK3-209ENST00000594948 PLD5Q8N7P1 536 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 STKLD1Q8NE28 680 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.73□□□□□ -0.21
VRK3-209ENST00000594948 PRPF31Q8WWY3 499 aaKnown RBP13.73□□□□□ -0.21
VRK3-209ENST00000594948 AZIN2Q96A70 460 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 GBP5Q96PP8 586 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 TBCBQ99426 244 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 PCYT2Q99447 389 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 VCX3BQ9H321 246 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 PTPRHQ9HD43 1115 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 WDR90Q96KV7 1748 aa13.73□□□□□ -0.21
VRK3-209ENST00000594948 KLHL33A6NCF5 533 aa13.72□□□□□ -0.21
VRK3-209ENST00000594948 C19orf81C9J6K1 198 aa13.72□□□□□ -0.21
VRK3-209ENST00000594948 CILPO75339 1184 aa13.72□□□□□ -0.21
VRK3-209ENST00000594948 UPP2O95045 317 aa13.72□□□□□ -0.21
VRK3-209ENST00000594948 ZBED1O96006 694 aa13.72□□□□□ -0.21
VRK3-209ENST00000594948 CPOXP36551 454 aa13.72□□□□□ -0.21
VRK3-209ENST00000594948 MMRN1Q13201 1228 aa13.72□□□□□ -0.21
VRK3-209ENST00000594948 DYNC1I2Q13409 638 aaKnown RBP13.72□□□□□ -0.21
VRK3-209ENST00000594948 C1orf146Q5VVC0 180 aa13.72□□□□□ -0.21
VRK3-209ENST00000594948 FOXB2Q5VYV0 432 aa13.72□□□□□ -0.21
VRK3-209ENST00000594948 CES4AQ5XG92 561 aa13.72□□□□□ -0.21
VRK3-209ENST00000594948 UNC5AQ6ZN44 842 aa13.72□□□□□ -0.21
VRK3-209ENST00000594948 CDKL3Q8IVW4 592 aaPredicted RBP13.72□□□□□ -0.21
VRK3-209ENST00000594948 NIM1KQ8IY84 436 aa13.72□□□□□ -0.21
VRK3-209ENST00000594948 JADE3Q92613 823 aa13.72□□□□□ -0.21
VRK3-209ENST00000594948 TMEM176AQ96HP8 235 aa13.72□□□□□ -0.21
VRK3-209ENST00000594948 EBNA1BP2Q99848 306 aaKnown RBP13.72□□□□□ -0.21
VRK3-209ENST00000594948 THTPAQ9BU02 230 aa13.72□□□□□ -0.21
VRK3-209ENST00000594948 MECRQ9BV79 373 aa13.72□□□□□ -0.21
VRK3-209ENST00000594948 TRIM4Q9C037 500 aa13.72□□□□□ -0.21
VRK3-209ENST00000594948 XAB2Q9HCS7 855 aaKnown RBP13.72□□□□□ -0.21
VRK3-209ENST00000594948 SMYD2Q9NRG4 433 aa13.72□□□□□ -0.21
VRK3-209ENST00000594948 ITGA11Q9UKX5 1188 aa13.72□□□□□ -0.21
VRK3-209ENST00000594948 SSX2IPQ9Y2D8 614 aa13.72□□□□□ -0.21
VRK3-209ENST00000594948 PCDHA11Q9Y5I1 949 aa13.72□□□□□ -0.21
VRK3-209ENST00000594948 SLC4A7Q9Y6M7 1214 aa13.72□□□□□ -0.21
VRK3-209ENST00000594948 DCAF8L1A6NGE4 600 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 PRR5-ARHGAP8B1AHC4 643 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 BUD23O43709 281 aaKnown RBP13.71□□□□□ -0.21
VRK3-209ENST00000594948 PRPSAP2O60256 369 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 CCNT2O60583 730 aaKnown RBP13.71□□□□□ -0.21
VRK3-209ENST00000594948 AVILO75366 819 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 CSH1P0DML2 217 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 CSH2P0DML3 217 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 STAT5BP51692 787 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 NRLP54845 237 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 SH3BGRP55822 239 aaPredicted RBP13.71□□□□□ -0.21
VRK3-209ENST00000594948 ARHGAP8P85298 464 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 MTM1Q13496 603 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 NAB1Q13506 487 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 TUBB3Q13509 450 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 HIC1Q14526 733 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 KRT81Q14533 505 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 FAM102AQ5T9C2 384 aaPredicted RBP13.71□□□□□ -0.21
VRK3-209ENST00000594948 IZUMO2Q6UXV1 221 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 TTC39CQ8N584 583 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 TTLL6Q8N841 843 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 ZNF280CQ8ND82 737 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 AFG1LQ8WV93 481 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 RXFP2Q8WXD0 754 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 NCSTNQ92542 709 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 SIGLEC10Q96LC7 697 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 ELOVL4Q9GZR5 314 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 PIDD1Q9HB75 910 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 S100A14Q9HCY8 104 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 NXF1Q9UBU9 619 aaKnown RBP13.71□□□□□ -0.21
VRK3-209ENST00000594948 ZNF112Q9UJU3 913 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 KIAA1257Q9ULG3 409 aa13.71□□□□□ -0.21
VRK3-209ENST00000594948 A0A088AWK7 358 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 IGKV6-21A0A0C4DH24 114 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 M0QYV0 167 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 ACKR2O00590 384 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 GCATO75600 419 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 FARP2O94887 1054 aaPredicted RBP13.71□□□□□ -0.22
VRK3-209ENST00000594948 RBL1P28749 1068 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 L1CAMP32004 1257 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 RAP1GAPP47736 663 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 BCAR1P56945 870 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 INHBEP58166 350 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 KDSRQ06136 332 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 BTKQ06187 659 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 LAMTOR4Q0VGL1 99 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 CDC16Q13042 620 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 EFHC1Q5JVL4 640 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 RABGAP1LQ5R372 815 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 DCAF15Q66K64 600 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 STEAP4Q687X5 459 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 ACAD11Q709F0 780 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 MARK2Q7KZI7 788 aaKnown RBP13.71□□□□□ -0.22
VRK3-209ENST00000594948 NCAPG2Q86XI2 1143 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 NDUFAF2Q8N183 169 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 PQLC3Q8N755 202 aa13.71□□□□□ -0.22
VRK3-209ENST00000594948 PHC3Q8NDX5 983 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms