RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 UBR7Q8N806 425 aa24.66■■□□□ 1.54
LSM4-204ENST00000594828 NT5C1BQ96P26 610 aa24.66■■□□□ 1.54
LSM4-204ENST00000594828 XPO6Q96QU8 1125 aaKnown RBP24.66■■□□□ 1.54
LSM4-204ENST00000594828 KIAA1257Q9ULG3 409 aa24.66■■□□□ 1.54
LSM4-204ENST00000594828 DCHS1Q96JQ0 3298 aa24.66■■□□□ 1.54
LSM4-204ENST00000594828 NEDD8-MDP1E9PL57 170 aa24.65■■□□□ 1.54
LSM4-204ENST00000594828 SGK1O00141 431 aa24.65■■□□□ 1.54
LSM4-204ENST00000594828 XPO1O14980 1071 aaKnown RBP24.65■■□□□ 1.54
LSM4-204ENST00000594828 DCLK1O15075 740 aa24.65■■□□□ 1.54
LSM4-204ENST00000594828 FOXD2O60548 495 aaPredicted RBP24.65■■□□□ 1.54
LSM4-204ENST00000594828 STC2O76061 302 aa24.65■■□□□ 1.54
LSM4-204ENST00000594828 EPN2O95208 641 aa24.65■■□□□ 1.54
LSM4-204ENST00000594828 CHRM1P11229 460 aaPredicted RBP24.65■■□□□ 1.54
LSM4-204ENST00000594828 TYRP14679 529 aa24.65■■□□□ 1.54
LSM4-204ENST00000594828 ATXN1P54253 815 aaKnown RBP24.65■■□□□ 1.54
LSM4-204ENST00000594828 STX17P56962 302 aa24.65■■□□□ 1.54
LSM4-204ENST00000594828 EFEMP1Q12805 493 aa24.65■■□□□ 1.54
LSM4-204ENST00000594828 PLK5Q496M5 336 aa24.65■■□□□ 1.54
LSM4-204ENST00000594828 USP39Q53GS9 565 aaKnown RBP24.65■■□□□ 1.54
LSM4-204ENST00000594828 RASSF3Q86WH2 238 aa24.65■■□□□ 1.54
LSM4-204ENST00000594828 KCNV2Q8TDN2 545 aa24.65■■□□□ 1.54
LSM4-204ENST00000594828 CNOT6LQ96LI5 555 aaKnown RBP24.65■■□□□ 1.54
LSM4-204ENST00000594828 TPSD1Q9BZJ3 242 aa24.65■■□□□ 1.54
LSM4-204ENST00000594828 DUSP15Q9H1R2 295 aaPredicted RBP24.65■■□□□ 1.54
LSM4-204ENST00000594828 ZDHHC4Q9NPG8 344 aa24.65■■□□□ 1.54
LSM4-204ENST00000594828 DNAJC17Q9NVM6 304 aaKnown RBP24.65■■□□□ 1.54
LSM4-204ENST00000594828 MARK1Q9P0L2 795 aa24.65■■□□□ 1.54
LSM4-204ENST00000594828 RASAL2Q9UJF2 1139 aa24.65■■□□□ 1.54
LSM4-204ENST00000594828 TULP2O00295 520 aa24.64■■□□□ 1.54
LSM4-204ENST00000594828 TRIM24O15164 1050 aa24.64■■□□□ 1.54
LSM4-204ENST00000594828 P4HA2O15460 535 aa24.64■■□□□ 1.54
LSM4-204ENST00000594828 ALDH1A2O94788 518 aa24.64■■□□□ 1.54
LSM4-204ENST00000594828 GNA14O95837 355 aa24.64■■□□□ 1.54
LSM4-204ENST00000594828 ZBED1O96006 694 aa24.64■■□□□ 1.54
LSM4-204ENST00000594828 YWHAGP61981 247 aaKnown RBP eCLIP24.64■■□□□ 1.54
LSM4-204ENST00000594828 BST2Q10589 180 aaKnown RBP24.64■■□□□ 1.54
LSM4-204ENST00000594828 PAK1Q13153 545 aa24.64■■□□□ 1.54
LSM4-204ENST00000594828 ELF2Q15723 593 aa24.64■■□□□ 1.54
LSM4-204ENST00000594828 C10orf76Q5T2E6 689 aa24.64■■□□□ 1.54
LSM4-204ENST00000594828 PM20D1Q6GTS8 502 aa24.64■■□□□ 1.54
LSM4-204ENST00000594828 GRAMD4Q6IC98 578 aa24.64■■□□□ 1.54
LSM4-204ENST00000594828 TMEM270Q6UE05 265 aa24.64■■□□□ 1.54
LSM4-204ENST00000594828 Q6ZNB5 142 aa24.64■■□□□ 1.54
LSM4-204ENST00000594828 RSRC2Q7L4I2 434 aaKnown RBP24.64■■□□□ 1.54
LSM4-204ENST00000594828 PPM1KQ8N3J5 372 aa24.64■■□□□ 1.54
LSM4-204ENST00000594828 TERB1Q8NA31 727 aa24.64■■□□□ 1.54
LSM4-204ENST00000594828 UBA3Q8TBC4 463 aa24.64■■□□□ 1.54
LSM4-204ENST00000594828 ULBP1Q9BZM6 244 aa24.64■■□□□ 1.54
LSM4-204ENST00000594828 LRRC4Q9HBW1 653 aa24.64■■□□□ 1.54
LSM4-204ENST00000594828 POLMQ9NP87 494 aaPredicted RBP24.64■■□□□ 1.54
LSM4-204ENST00000594828 INVSQ9Y283 1065 aa24.64■■□□□ 1.54
LSM4-204ENST00000594828 ZNF510Q9Y2H8 683 aa24.64■■□□□ 1.54
LSM4-204ENST00000594828 PCDHB4Q9Y5E5 795 aa24.64■■□□□ 1.54
LSM4-204ENST00000594828 EML5Q05BV3 1969 aa24.63■■□□□ 1.53
LSM4-204ENST00000594828 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.63■■□□□ 1.53
LSM4-204ENST00000594828 CACNG3O60359 315 aa24.63■■□□□ 1.53
LSM4-204ENST00000594828 RHOBTB1O94844 696 aa24.63■■□□□ 1.53
LSM4-204ENST00000594828 PAEPP09466 180 aa24.63■■□□□ 1.53
LSM4-204ENST00000594828 HNRNPLP14866 589 aaKnown RBP eCLIP24.63■■□□□ 1.53
LSM4-204ENST00000594828 GBP1P32455 592 aa24.63■■□□□ 1.53
LSM4-204ENST00000594828 ZNF513Q8N8E2 541 aaPredicted RBP24.63■■□□□ 1.53
LSM4-204ENST00000594828 MDGA1Q8NFP4 955 aa24.63■■□□□ 1.53
LSM4-204ENST00000594828 LMO3Q8TAP4 145 aa24.63■■□□□ 1.53
LSM4-204ENST00000594828 NETO1Q8TDF5 533 aa24.63■■□□□ 1.53
LSM4-204ENST00000594828 RTKNQ9BST9 563 aa24.63■■□□□ 1.53
LSM4-204ENST00000594828 SRRTQ9BXP5 876 aaKnown RBP24.63■■□□□ 1.53
LSM4-204ENST00000594828 DCLK3Q9C098 648 aa24.63■■□□□ 1.53
LSM4-204ENST00000594828 MARCH2Q9P0N8 246 aa24.63■■□□□ 1.53
LSM4-204ENST00000594828 PCDHGA5Q9Y5G8 931 aa24.63■■□□□ 1.53
LSM4-204ENST00000594828 O00370 1275 aa24.62■■□□□ 1.53
LSM4-204ENST00000594828 ADAM23O75077 832 aa24.62■■□□□ 1.53
LSM4-204ENST00000594828 KLKB1P03952 638 aa24.62■■□□□ 1.53
LSM4-204ENST00000594828 HMBSP08397 361 aa24.62■■□□□ 1.53
LSM4-204ENST00000594828 UBE2HP62256 183 aa24.62■■□□□ 1.53
LSM4-204ENST00000594828 KCNH2Q12809 1159 aa24.62■■□□□ 1.53
LSM4-204ENST00000594828 CCDC6Q16204 474 aa24.62■■□□□ 1.53
LSM4-204ENST00000594828 TRMT11Q7Z4G4 463 aaKnown RBP24.62■■□□□ 1.53
LSM4-204ENST00000594828 C11orf74Q86VG3 221 aa24.62■■□□□ 1.53
LSM4-204ENST00000594828 TRIM59Q8IWR1 403 aa24.62■■□□□ 1.53
LSM4-204ENST00000594828 TRIML1Q8N9V2 468 aa24.62■■□□□ 1.53
LSM4-204ENST00000594828 EHBP1Q8NDI1 1231 aa24.62■■□□□ 1.53
LSM4-204ENST00000594828 NDRG1Q92597 394 aaKnown RBP24.62■■□□□ 1.53
LSM4-204ENST00000594828 IPO9Q96P70 1041 aaKnown RBP24.62■■□□□ 1.53
LSM4-204ENST00000594828 STRIP2Q9ULQ0 834 aa24.62■■□□□ 1.53
LSM4-204ENST00000594828 STARD13Q9Y3M8 1113 aa24.62■■□□□ 1.53
LSM4-204ENST00000594828 RALGAPA1Q6GYQ0 2036 aa24.61■■□□□ 1.53
LSM4-204ENST00000594828 ZNF806P0C7X5 589 aa24.61■■□□□ 1.53
LSM4-204ENST00000594828 SETSIPP0DME0 302 aa24.61■■□□□ 1.53
LSM4-204ENST00000594828 CHKAP35790 457 aa24.61■■□□□ 1.53
LSM4-204ENST00000594828 ADIGQ0VDE8 80 aa24.61■■□□□ 1.53
LSM4-204ENST00000594828 LCLAT1Q6UWP7 414 aa24.61■■□□□ 1.53
LSM4-204ENST00000594828 KCTD13Q8WZ19 329 aa24.61■■□□□ 1.53
LSM4-204ENST00000594828 KAT5Q92993 513 aa24.61■■□□□ 1.53
LSM4-204ENST00000594828 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.61■■□□□ 1.53
LSM4-204ENST00000594828 SLC12A8A0AV02 714 aa24.6■■□□□ 1.53
LSM4-204ENST00000594828 RNF225M0QZC1 329 aaPredicted RBP24.6■■□□□ 1.53
LSM4-204ENST00000594828 FGFR1OPO95684 399 aaKnown RBP24.6■■□□□ 1.53
LSM4-204ENST00000594828 CORO1AP31146 461 aaKnown RBP24.6■■□□□ 1.53
LSM4-204ENST00000594828 MARSP56192 900 aaKnown RBP24.6■■□□□ 1.53
LSM4-204ENST00000594828 SF3A2Q15428 464 aaKnown RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms