RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 ENGP17813 658 aa23.88■■□□□ 1.41
SSBP4-203ENST00000593641 CMA1P23946 247 aa23.88■■□□□ 1.41
SSBP4-203ENST00000593641 ATXN3P54252 364 aaPredicted RBP23.88■■□□□ 1.41
SSBP4-203ENST00000593641 EGFLAMQ63HQ2 1017 aa23.88■■□□□ 1.41
SSBP4-203ENST00000593641 KLHDC10Q6PID8 442 aa23.88■■□□□ 1.41
SSBP4-203ENST00000593641 SLC23A3Q6PIS1 610 aa23.88■■□□□ 1.41
SSBP4-203ENST00000593641 INTS8Q75QN2 995 aaKnown RBP23.88■■□□□ 1.41
SSBP4-203ENST00000593641 TADA2BQ86TJ2 420 aa23.88■■□□□ 1.41
SSBP4-203ENST00000593641 CCDC150Q8NCX0 1101 aa23.88■■□□□ 1.41
SSBP4-203ENST00000593641 TWNKQ96RR1 684 aa23.88■■□□□ 1.41
SSBP4-203ENST00000593641 CYP3A43Q9HB55 503 aa23.88■■□□□ 1.41
SSBP4-203ENST00000593641 PILRBQ9UKJ0 227 aa23.88■■□□□ 1.41
SSBP4-203ENST00000593641 TRAF3IP3Q9Y228 551 aa23.88■■□□□ 1.41
SSBP4-203ENST00000593641 GREM1O60565 184 aa23.87■■□□□ 1.41
SSBP4-203ENST00000593641 ZNF217O75362 1048 aa23.87■■□□□ 1.41
SSBP4-203ENST00000593641 RARGP13631 454 aa23.87■■□□□ 1.41
SSBP4-203ENST00000593641 KRT13P13646 458 aa23.87■■□□□ 1.41
SSBP4-203ENST00000593641 ITPKAP23677 461 aa23.87■■□□□ 1.41
SSBP4-203ENST00000593641 NR2F2P24468 414 aa23.87■■□□□ 1.41
SSBP4-203ENST00000593641 C1orf220Q5T0J3 134 aa23.87■■□□□ 1.41
SSBP4-203ENST00000593641 PEAR1Q5VY43 1037 aaPredicted RBP23.87■■□□□ 1.41
SSBP4-203ENST00000593641 RABEPKQ7Z6M1 372 aa23.87■■□□□ 1.41
SSBP4-203ENST00000593641 MIB1Q86YT6 1006 aa23.87■■□□□ 1.41
SSBP4-203ENST00000593641 DEFB124Q8NES8 71 aa23.87■■□□□ 1.41
SSBP4-203ENST00000593641 CEP76Q8TAP6 659 aa23.87■■□□□ 1.41
SSBP4-203ENST00000593641 NIF3L1Q9GZT8 377 aa23.87■■□□□ 1.41
SSBP4-203ENST00000593641 SLC32A1Q9H598 525 aa23.87■■□□□ 1.41
SSBP4-203ENST00000593641 OSER1Q9NX31 292 aa23.87■■□□□ 1.41
SSBP4-203ENST00000593641 DNMT3LQ9UJW3 386 aa23.87■■□□□ 1.41
SSBP4-203ENST00000593641 IGF2RP11717 2491 aa23.87■■□□□ 1.41
SSBP4-203ENST00000593641 A0A1W2PQF6 199 aa23.86■■□□□ 1.41
SSBP4-203ENST00000593641 A0A1W2PQH9 124 aa23.86■■□□□ 1.41
SSBP4-203ENST00000593641 HHLA1C9JL84 531 aa23.86■■□□□ 1.41
SSBP4-203ENST00000593641 PROS1P07225 676 aa23.86■■□□□ 1.41
SSBP4-203ENST00000593641 CD58P19256 250 aa23.86■■□□□ 1.41
SSBP4-203ENST00000593641 PLA2G4AP47712 749 aa23.86■■□□□ 1.41
SSBP4-203ENST00000593641 GCLMP48507 274 aa23.86■■□□□ 1.41
SSBP4-203ENST00000593641 DGKGP49619 791 aa23.86■■□□□ 1.41
SSBP4-203ENST00000593641 DUOXA1Q1HG43 343 aa23.86■■□□□ 1.41
SSBP4-203ENST00000593641 C10orf120Q5SQS8 335 aa23.86■■□□□ 1.41
SSBP4-203ENST00000593641 IPO4Q8TEX9 1081 aaKnown RBP23.86■■□□□ 1.41
SSBP4-203ENST00000593641 MMRN2Q9H8L6 949 aa23.86■■□□□ 1.41
SSBP4-203ENST00000593641 NMUR1Q9HB89 426 aa23.86■■□□□ 1.41
SSBP4-203ENST00000593641 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.86■■□□□ 1.41
SSBP4-203ENST00000593641 NAGPAQ9UK23 515 aa23.86■■□□□ 1.41
SSBP4-203ENST00000593641 HCN2Q9UL51 889 aa23.86■■□□□ 1.41
SSBP4-203ENST00000593641 MDM4O15151 490 aa23.85■■□□□ 1.41
SSBP4-203ENST00000593641 TRIM49P0CI25 452 aa23.85■■□□□ 1.41
SSBP4-203ENST00000593641 TRIM49CP0CI26 452 aa23.85■■□□□ 1.41
SSBP4-203ENST00000593641 SYKP43405 635 aa23.85■■□□□ 1.41
SSBP4-203ENST00000593641 PSEN1P49768 467 aa23.85■■□□□ 1.41
SSBP4-203ENST00000593641 ZNF33AQ06730 810 aa23.85■■□□□ 1.41
SSBP4-203ENST00000593641 NFIL3Q16649 462 aa23.85■■□□□ 1.41
SSBP4-203ENST00000593641 UNQ6494/PRO21346Q6UXR6 183 aa23.85■■□□□ 1.41
SSBP4-203ENST00000593641 DEFB119Q8N690 84 aa23.85■■□□□ 1.41
SSBP4-203ENST00000593641 SPRYD3Q8NCJ5 442 aa23.85■■□□□ 1.41
SSBP4-203ENST00000593641 TAS1R2Q8TE23 839 aa23.85■■□□□ 1.41
SSBP4-203ENST00000593641 BHMTQ93088 406 aa23.85■■□□□ 1.41
SSBP4-203ENST00000593641 SPATA32Q96LK8 384 aa23.85■■□□□ 1.41
SSBP4-203ENST00000593641 APOBEC3GQ9HC16 384 aaKnown RBP23.85■■□□□ 1.41
SSBP4-203ENST00000593641 NUDT5Q9UKK9 219 aa23.85■■□□□ 1.41
SSBP4-203ENST00000593641 SLC6A14Q9UN76 642 aa23.85■■□□□ 1.41
SSBP4-203ENST00000593641 HPSEQ9Y251 543 aa23.85■■□□□ 1.41
SSBP4-203ENST00000593641 FAM208BQ5VWN6 2430 aa23.84■■□□□ 1.41
SSBP4-203ENST00000593641 CILPO75339 1184 aa23.84■■□□□ 1.41
SSBP4-203ENST00000593641 RALAP11233 206 aa23.84■■□□□ 1.41
SSBP4-203ENST00000593641 NDUFV2P19404 249 aa23.84■■□□□ 1.41
SSBP4-203ENST00000593641 RPL13P26373 211 aaKnown RBP23.84■■□□□ 1.41
SSBP4-203ENST00000593641 KIF11P52732 1056 aa23.84■■□□□ 1.41
SSBP4-203ENST00000593641 GFPT1Q06210 699 aaPredicted RBP23.84■■□□□ 1.41
SSBP4-203ENST00000593641 TOGARAM2Q6ZUX3 1019 aa23.84■■□□□ 1.41
SSBP4-203ENST00000593641 FAM186BQ8IYM0 893 aa23.84■■□□□ 1.41
SSBP4-203ENST00000593641 HDDC3Q8N4P3 179 aa23.84■■□□□ 1.41
SSBP4-203ENST00000593641 CDK5RAP1Q96SZ6 601 aaKnown RBP23.84■■□□□ 1.41
SSBP4-203ENST00000593641 ACOX2Q99424 681 aa23.84■■□□□ 1.41
SSBP4-203ENST00000593641 GABRG3Q99928 467 aa23.84■■□□□ 1.41
SSBP4-203ENST00000593641 GTPBP2Q9BX10 602 aaKnown RBP23.84■■□□□ 1.41
SSBP4-203ENST00000593641 CYP8B1Q9UNU6 501 aa23.84■■□□□ 1.41
SSBP4-203ENST00000593641 ASPMQ8IZT6 3477 aa23.83■■□□□ 1.41
SSBP4-203ENST00000593641 IGHV1OR15-9A0A0B4J2B8 117 aa23.83■■□□□ 1.41
SSBP4-203ENST00000593641 C1QTNF9BB2RNN3 333 aa23.83■■□□□ 1.41
SSBP4-203ENST00000593641 PRRT4C9JH25 899 aa23.83■■□□□ 1.41
SSBP4-203ENST00000593641 RHOBTB3O94955 611 aa23.83■■□□□ 1.41
SSBP4-203ENST00000593641 C1QTNF9P0C862 333 aa23.83■■□□□ 1.41
SSBP4-203ENST00000593641 KRT85P78386 507 aa23.83■■□□□ 1.41
SSBP4-203ENST00000593641 ENPEPQ07075 957 aa23.83■■□□□ 1.41
SSBP4-203ENST00000593641 PPP3CAQ08209 521 aa23.83■■□□□ 1.41
SSBP4-203ENST00000593641 KIAA1211LQ6NV74 962 aa23.83■■□□□ 1.41
SSBP4-203ENST00000593641 CCDC186Q7Z3E2 898 aa23.83■■□□□ 1.41
SSBP4-203ENST00000593641 ERLEC1Q96DZ1 483 aa23.83■■□□□ 1.41
SSBP4-203ENST00000593641 DUSP16Q9BY84 665 aa23.83■■□□□ 1.41
SSBP4-203ENST00000593641 ADAM33Q9BZ11 813 aa23.83■■□□□ 1.41
SSBP4-203ENST00000593641 ZNF510Q9Y2H8 683 aa23.83■■□□□ 1.41
SSBP4-203ENST00000593641 PCDH15Q96QU1 1955 aa23.82■■□□□ 1.4
SSBP4-203ENST00000593641 SERPINF2P08697 491 aa23.82■■□□□ 1.4
SSBP4-203ENST00000593641 PRR29P0C7W0 189 aa23.82■■□□□ 1.4
SSBP4-203ENST00000593641 PSMC2P35998 433 aaKnown RBP23.82■■□□□ 1.4
SSBP4-203ENST00000593641 PPP1R26Q5T8A7 1209 aaPredicted RBP23.82■■□□□ 1.4
SSBP4-203ENST00000593641 Q6ZNB5 142 aa23.82■■□□□ 1.4
SSBP4-203ENST00000593641 TMEM8AQ9HCN3 771 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms