RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 NUSAP1Q9BXS6 441 aaKnown RBP25.21■■□□□ 1.63
LSM4-202ENST00000593564 TMEM74BQ9NUR3 256 aa25.21■■□□□ 1.63
LSM4-202ENST00000593564 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.21■■□□□ 1.63
LSM4-202ENST00000593564 DNMT3LQ9UJW3 386 aa25.21■■□□□ 1.63
LSM4-202ENST00000593564 MYH10P35580 1976 aa25.21■■□□□ 1.63
LSM4-202ENST00000593564 A0A1W2PQF6 199 aa25.2■■□□□ 1.62
LSM4-202ENST00000593564 A0A1W2PQH9 124 aa25.2■■□□□ 1.62
LSM4-202ENST00000593564 RARGP13631 454 aa25.2■■□□□ 1.62
LSM4-202ENST00000593564 KRT13P13646 458 aa25.2■■□□□ 1.62
LSM4-202ENST00000593564 CEACAM1P13688 526 aa25.2■■□□□ 1.62
LSM4-202ENST00000593564 PLA2G4AP47712 749 aa25.2■■□□□ 1.62
LSM4-202ENST00000593564 NDUFA8P51970 172 aa25.2■■□□□ 1.62
LSM4-202ENST00000593564 KIF11P52732 1056 aa25.2■■□□□ 1.62
LSM4-202ENST00000593564 KRT85P78386 507 aa25.2■■□□□ 1.62
LSM4-202ENST00000593564 ZNF252P-AS1Q0IIN9 211 aa25.2■■□□□ 1.62
LSM4-202ENST00000593564 DPYDQ12882 1025 aa25.2■■□□□ 1.62
LSM4-202ENST00000593564 PEAR1Q5VY43 1037 aaPredicted RBP25.2■■□□□ 1.62
LSM4-202ENST00000593564 EGFLAMQ63HQ2 1017 aa25.2■■□□□ 1.62
LSM4-202ENST00000593564 TPGS1Q6ZTW0 290 aa25.2■■□□□ 1.62
LSM4-202ENST00000593564 FAM186BQ8IYM0 893 aa25.2■■□□□ 1.62
LSM4-202ENST00000593564 DNAI2Q9GZS0 605 aa25.2■■□□□ 1.62
LSM4-202ENST00000593564 CALCOCO1Q9P1Z2 691 aa25.2■■□□□ 1.62
LSM4-202ENST00000593564 PILRBQ9UKJ0 227 aa25.2■■□□□ 1.62
LSM4-202ENST00000593564 MDM4O15151 490 aa25.19■■□□□ 1.62
LSM4-202ENST00000593564 AP5Z1O43299 807 aa25.19■■□□□ 1.62
LSM4-202ENST00000593564 CD58P19256 250 aa25.19■■□□□ 1.62
LSM4-202ENST00000593564 RPL13P26373 211 aaKnown RBP25.19■■□□□ 1.62
LSM4-202ENST00000593564 PSMC2P35998 433 aaKnown RBP25.19■■□□□ 1.62
LSM4-202ENST00000593564 SLC23A3Q6PIS1 610 aa25.19■■□□□ 1.62
LSM4-202ENST00000593564 SLC36A4Q6YBV0 504 aa25.19■■□□□ 1.62
LSM4-202ENST00000593564 Q6ZNB5 142 aa25.19■■□□□ 1.62
LSM4-202ENST00000593564 CCDC186Q7Z3E2 898 aa25.19■■□□□ 1.62
LSM4-202ENST00000593564 TADA2BQ86TJ2 420 aa25.19■■□□□ 1.62
LSM4-202ENST00000593564 CHPFQ8IZ52 775 aa25.19■■□□□ 1.62
LSM4-202ENST00000593564 GUF1Q8N442 669 aaKnown RBP25.19■■□□□ 1.62
LSM4-202ENST00000593564 ZNF276Q8N554 614 aa25.19■■□□□ 1.62
LSM4-202ENST00000593564 GABRG3Q99928 467 aa25.19■■□□□ 1.62
LSM4-202ENST00000593564 CD248Q9HCU0 757 aa25.19■■□□□ 1.62
LSM4-202ENST00000593564 ZFHX4Q86UP3 3567 aa25.19■■□□□ 1.62
LSM4-202ENST00000593564 TNRC6BQ9UPQ9 1833 aaKnown RBP25.19■■□□□ 1.62
LSM4-202ENST00000593564 FRYQ5TBA9 3013 aa25.18■■□□□ 1.62
LSM4-202ENST00000593564 WASP42768 502 aa25.18■■□□□ 1.62
LSM4-202ENST00000593564 PSEN1P49768 467 aa25.18■■□□□ 1.62
LSM4-202ENST00000593564 C10orf120Q5SQS8 335 aa25.18■■□□□ 1.62
LSM4-202ENST00000593564 SDE2Q6IQ49 451 aa25.18■■□□□ 1.62
LSM4-202ENST00000593564 SCD5Q86SK9 330 aa25.18■■□□□ 1.62
LSM4-202ENST00000593564 CCDC150Q8NCX0 1101 aa25.18■■□□□ 1.62
LSM4-202ENST00000593564 IPO4Q8TEX9 1081 aaKnown RBP25.18■■□□□ 1.62
LSM4-202ENST00000593564 ACOX2Q99424 681 aa25.18■■□□□ 1.62
LSM4-202ENST00000593564 DUSP16Q9BY84 665 aa25.18■■□□□ 1.62
LSM4-202ENST00000593564 TMEM8AQ9HCN3 771 aa25.18■■□□□ 1.62
LSM4-202ENST00000593564 NAGPAQ9UK23 515 aa25.18■■□□□ 1.62
LSM4-202ENST00000593564 NUDT5Q9UKK9 219 aa25.18■■□□□ 1.62
LSM4-202ENST00000593564 MAPK8IP1Q9UQF2 711 aa25.18■■□□□ 1.62
LSM4-202ENST00000593564 USP3Q9Y6I4 520 aa25.18■■□□□ 1.62
LSM4-202ENST00000593564 PRRT4C9JH25 899 aa25.17■■□□□ 1.62
LSM4-202ENST00000593564 ZBTB24O43167 697 aaPredicted RBP25.17■■□□□ 1.62
LSM4-202ENST00000593564 ENGP17813 658 aa25.17■■□□□ 1.62
LSM4-202ENST00000593564 ITPKAP23677 461 aa25.17■■□□□ 1.62
LSM4-202ENST00000593564 GTF2H1P32780 548 aa25.17■■□□□ 1.62
LSM4-202ENST00000593564 DGKGP49619 791 aa25.17■■□□□ 1.62
LSM4-202ENST00000593564 MCCD1P59942 119 aaPredicted RBP25.17■■□□□ 1.62
LSM4-202ENST00000593564 RPL6Q02878 288 aaKnown RBP25.17■■□□□ 1.62
LSM4-202ENST00000593564 ADAM9Q13443 819 aa25.17■■□□□ 1.62
LSM4-202ENST00000593564 UAP1L1Q3KQV9 507 aa25.17■■□□□ 1.62
LSM4-202ENST00000593564 PPP1R26Q5T8A7 1209 aaPredicted RBP25.17■■□□□ 1.62
LSM4-202ENST00000593564 TOGARAM2Q6ZUX3 1019 aa25.17■■□□□ 1.62
LSM4-202ENST00000593564 FAXDC2Q96IV6 333 aa25.17■■□□□ 1.62
LSM4-202ENST00000593564 MMRN2Q9H8L6 949 aa25.17■■□□□ 1.62
LSM4-202ENST00000593564 CLIC5Q9NZA1 410 aa25.17■■□□□ 1.62
LSM4-202ENST00000593564 ATXN2Q99700 1313 aaKnown RBP25.16■■□□□ 1.62
LSM4-202ENST00000593564 ASCC3Q8N3C0 2202 aaKnown RBP25.16■■□□□ 1.62
LSM4-202ENST00000593564 CFAP47Q6ZTR5 3102 aa25.16■■□□□ 1.62
LSM4-202ENST00000593564 ZNF217O75362 1048 aa25.16■■□□□ 1.62
LSM4-202ENST00000593564 CISD3P0C7P0 127 aa25.16■■□□□ 1.62
LSM4-202ENST00000593564 NDUFV2P19404 249 aa25.16■■□□□ 1.62
LSM4-202ENST00000593564 ZCWPW2Q504Y3 356 aa25.16■■□□□ 1.62
LSM4-202ENST00000593564 KRT39Q6A163 491 aa25.16■■□□□ 1.62
LSM4-202ENST00000593564 CEP76Q8TAP6 659 aa25.16■■□□□ 1.62
LSM4-202ENST00000593564 CDK5RAP1Q96SZ6 601 aaKnown RBP25.16■■□□□ 1.62
LSM4-202ENST00000593564 WASF3Q9UPY6 502 aa25.16■■□□□ 1.62
LSM4-202ENST00000593564 ZDHHC9Q9Y397 364 aa25.16■■□□□ 1.62
LSM4-202ENST00000593564 IGHV1OR15-9A0A0B4J2B8 117 aa25.15■■□□□ 1.62
LSM4-202ENST00000593564 STC2O76061 302 aa25.15■■□□□ 1.62
LSM4-202ENST00000593564 RALAP11233 206 aa25.15■■□□□ 1.62
LSM4-202ENST00000593564 MAPK8P45983 427 aa25.15■■□□□ 1.62
LSM4-202ENST00000593564 DUOXA1Q1HG43 343 aa25.15■■□□□ 1.62
LSM4-202ENST00000593564 KIAA1211LQ6NV74 962 aa25.15■■□□□ 1.62
LSM4-202ENST00000593564 KRBA2Q6ZNG9 492 aa25.15■■□□□ 1.62
LSM4-202ENST00000593564 RABEPKQ7Z6M1 372 aa25.15■■□□□ 1.62
LSM4-202ENST00000593564 TTC39CQ8N584 583 aa25.15■■□□□ 1.62
LSM4-202ENST00000593564 FBXO10Q9UK96 956 aa25.15■■□□□ 1.62
LSM4-202ENST00000593564 ZNF510Q9Y2H8 683 aa25.15■■□□□ 1.62
LSM4-202ENST00000593564 PI4KAP42356 2102 aa25.15■■□□□ 1.62
LSM4-202ENST00000593564 A0A1W2PQ27 194 aa25.14■■□□□ 1.62
LSM4-202ENST00000593564 A0A1W2PQ64 194 aa25.14■■□□□ 1.62
LSM4-202ENST00000593564 A0A1W2PQD8 194 aa25.14■■□□□ 1.62
LSM4-202ENST00000593564 GFRA2O00451 464 aa25.14■■□□□ 1.62
LSM4-202ENST00000593564 ZNF33AQ06730 810 aa25.14■■□□□ 1.62
LSM4-202ENST00000593564 FOXC1Q12948 553 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms