RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 BRI3BPQ8WY22 251 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 SARAFQ96BY9 339 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 PRR25Q96S07 402 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 FSD1LQ9BXM9 530 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 CHST12Q9NRB3 414 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 NKX1-2Q9UD57 310 aaPredicted RBP5.75□□□□□ -1.49
SMAD4-216ENST00000593223 GABRQQ9UN88 632 aa5.75□□□□□ -1.49
SMAD4-216ENST00000593223 AGPSO00116 658 aa5.74□□□□□ -1.49
SMAD4-216ENST00000593223 CCNT2O60583 730 aaKnown RBP5.74□□□□□ -1.49
SMAD4-216ENST00000593223 FGF18O76093 207 aa5.74□□□□□ -1.49
SMAD4-216ENST00000593223 JTBO76095 146 aa5.74□□□□□ -1.49
SMAD4-216ENST00000593223 CREB1P16220 341 aa5.74□□□□□ -1.49
SMAD4-216ENST00000593223 ITPKBP27987 946 aa5.74□□□□□ -1.49
SMAD4-216ENST00000593223 RBL1P28749 1068 aa5.74□□□□□ -1.49
SMAD4-216ENST00000593223 COPAP53621 1224 aa5.74□□□□□ -1.49
SMAD4-216ENST00000593223 CYP1B1Q16678 543 aa5.74□□□□□ -1.49
SMAD4-216ENST00000593223 FAXCQ5TGI0 409 aa5.74□□□□□ -1.49
SMAD4-216ENST00000593223 MTHFD1LQ6UB35 978 aa5.74□□□□□ -1.49
SMAD4-216ENST00000593223 FSTL5Q8N475 847 aaPredicted RBP5.74□□□□□ -1.49
SMAD4-216ENST00000593223 NGDNQ8NEJ9 315 aaKnown RBP5.74□□□□□ -1.49
SMAD4-216ENST00000593223 SNX27Q96L92 541 aa5.74□□□□□ -1.49
SMAD4-216ENST00000593223 EIF2AQ9BY44 585 aaKnown RBP5.74□□□□□ -1.49
SMAD4-216ENST00000593223 R3HDMLQ9H3Y0 253 aa5.74□□□□□ -1.49
SMAD4-216ENST00000593223 ZBTB26Q9HCK0 441 aa5.74□□□□□ -1.49
SMAD4-216ENST00000593223 TFCP2L1Q9NZI6 479 aa5.74□□□□□ -1.49
SMAD4-216ENST00000593223 TMOD4Q9NZQ9 345 aa5.74□□□□□ -1.49
SMAD4-216ENST00000593223 ARPP21Q9UBL0 812 aaPredicted RBP5.74□□□□□ -1.49
SMAD4-216ENST00000593223 STEAP1Q9UHE8 339 aa5.74□□□□□ -1.49
SMAD4-216ENST00000593223 AMFRQ9UKV5 643 aa5.74□□□□□ -1.49
SMAD4-216ENST00000593223 RAPGEF2Q9Y4G8 1499 aa5.74□□□□□ -1.49
SMAD4-216ENST00000593223 CEP350Q5VT06 3117 aa5.74□□□□□ -1.49
SMAD4-216ENST00000593223 LRP5O75197 1615 aa5.74□□□□□ -1.49
SMAD4-216ENST00000593223 SUV39H1O43463 412 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 EXOC3O60645 756 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 NDST3O95803 873 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 NANOS3P60323 173 aaKnown RBP5.73□□□□□ -1.49
SMAD4-216ENST00000593223 BTKQ06187 659 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 WDR78Q5VTH9 848 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 DENND2CQ68D51 928 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 SUMO4Q6EEV6 95 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 USP17L6PQ6QN14 398 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 KRBA2Q6ZNG9 492 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 CNPY4Q8N129 248 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 DEPTORQ8TB45 409 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 GJA10Q969M2 543 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 KIAA1191Q96A73 305 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 SGCZQ96LD1 299 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 FAM227BQ96M60 508 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 LENG8Q96PV6 779 aaPredicted RBP5.73□□□□□ -1.49
SMAD4-216ENST00000593223 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.73□□□□□ -1.49
SMAD4-216ENST00000593223 PRDM13Q9H4Q3 707 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 ARFGAP3Q9NP61 516 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 SNX15Q9NRS6 342 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 FNIP2Q9P278 1114 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 ADAM21Q9UKJ8 722 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 RIMKLBQ9ULI2 386 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 SLC27A6Q9Y2P4 619 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 PCDHGB2Q9Y5G2 931 aa5.73□□□□□ -1.49
SMAD4-216ENST00000593223 FNDC1Q4ZHG4 1894 aaPredicted RBP5.73□□□□□ -1.49
SMAD4-216ENST00000593223 A0A087WZ62 844 aa5.72□□□□□ -1.49
SMAD4-216ENST00000593223 LRRC3CA6NJW4 275 aa5.72□□□□□ -1.49
SMAD4-216ENST00000593223 TJP3O95049 919 aa5.72□□□□□ -1.49
SMAD4-216ENST00000593223 ABCB4P21439 1286 aa5.72□□□□□ -1.49
SMAD4-216ENST00000593223 FPR3P25089 353 aa5.72□□□□□ -1.49
SMAD4-216ENST00000593223 EEF1GP26641 437 aaKnown RBP5.72□□□□□ -1.49
SMAD4-216ENST00000593223 CYP4F2P78329 520 aa5.72□□□□□ -1.49
SMAD4-216ENST00000593223 GPS1Q13098 491 aa5.72□□□□□ -1.49
SMAD4-216ENST00000593223 UBE4AQ14139 1066 aa5.72□□□□□ -1.49
SMAD4-216ENST00000593223 SLC35G1Q2M3R5 365 aa5.72□□□□□ -1.49
SMAD4-216ENST00000593223 CLEC4GQ6UXB4 293 aa5.72□□□□□ -1.49
SMAD4-216ENST00000593223 PTCHD4Q6ZW05 846 aa5.72□□□□□ -1.49
SMAD4-216ENST00000593223 EVI5LQ96CN4 794 aa5.72□□□□□ -1.49
SMAD4-216ENST00000593223 DAZAP1Q96EP5 407 aaKnown RBP5.72□□□□□ -1.49
SMAD4-216ENST00000593223 ZDHHC12Q96GR4 267 aa5.72□□□□□ -1.49
SMAD4-216ENST00000593223 VPS50Q96JG6 964 aa5.72□□□□□ -1.49
SMAD4-216ENST00000593223 BBC3Q96PG8 261 aaPredicted RBP5.72□□□□□ -1.49
SMAD4-216ENST00000593223 CIPCQ9C0C6 399 aa5.72□□□□□ -1.49
SMAD4-216ENST00000593223 ZNF700Q9H0M5 742 aa5.72□□□□□ -1.49
SMAD4-216ENST00000593223 PCDHAC1Q9H158 963 aa5.72□□□□□ -1.49
SMAD4-216ENST00000593223 TRIM36Q9NQ86 728 aa5.72□□□□□ -1.49
SMAD4-216ENST00000593223 MGAT4CQ9UBM8 478 aa5.72□□□□□ -1.49
SMAD4-216ENST00000593223 LPAR3Q9UBY5 353 aa5.72□□□□□ -1.49
SMAD4-216ENST00000593223 COMMD10Q9Y6G5 202 aa5.72□□□□□ -1.49
SMAD4-216ENST00000593223 EFCAB5A4FU69 1503 aa5.72□□□□□ -1.49
SMAD4-216ENST00000593223 ATP10AO60312 1499 aa5.71□□□□□ -1.49
SMAD4-216ENST00000593223 PLA2R1Q13018 1463 aa5.71□□□□□ -1.49
SMAD4-216ENST00000593223 CDK12Q9NYV4 1490 aaPredicted RBP5.71□□□□□ -1.49
SMAD4-216ENST00000593223 ABCA9Q8IUA7 1624 aa5.71□□□□□ -1.5
SMAD4-216ENST00000593223 RAPGEF6Q8TEU7 1601 aa5.71□□□□□ -1.5
SMAD4-216ENST00000593223 TARM1B6A8C7 271 aa5.71□□□□□ -1.5
SMAD4-216ENST00000593223 SMIM22K7EJ46 135 aa5.71□□□□□ -1.5
SMAD4-216ENST00000593223 M0R3H8 397 aa5.71□□□□□ -1.5
SMAD4-216ENST00000593223 PODXLO00592 558 aa5.71□□□□□ -1.5
SMAD4-216ENST00000593223 C1QL1O75973 258 aa5.71□□□□□ -1.5
SMAD4-216ENST00000593223 C1RP00736 705 aa5.71□□□□□ -1.5
SMAD4-216ENST00000593223 FGAP02671 866 aa5.71□□□□□ -1.5
SMAD4-216ENST00000593223 MYCLP12524 364 aaPredicted RBP5.71□□□□□ -1.5
SMAD4-216ENST00000593223 PAX3P23760 479 aa5.71□□□□□ -1.5
SMAD4-216ENST00000593223 HSPA7P48741 367 aa5.71□□□□□ -1.5
SMAD4-216ENST00000593223 EIF4A1P60842 406 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms