RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 DUSP16Q9BY84 665 aa18.88■□□□□ 0.61
CIRBP-243ENST00000593128 CISHQ9NSE2 258 aa18.88■□□□□ 0.61
CIRBP-243ENST00000593128 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.88■□□□□ 0.61
CIRBP-243ENST00000593128 PLK2Q9NYY3 685 aa18.88■□□□□ 0.61
CIRBP-243ENST00000593128 A0A0A0MRY4 1105 aa18.87■□□□□ 0.61
CIRBP-243ENST00000593128 LNP1A1A4G5 178 aa18.87■□□□□ 0.61
CIRBP-243ENST00000593128 ZBTB24O43167 697 aaPredicted RBP18.87■□□□□ 0.61
CIRBP-243ENST00000593128 STX10O60499 249 aa18.87■□□□□ 0.61
CIRBP-243ENST00000593128 GTF2H1P32780 548 aa18.87■□□□□ 0.61
CIRBP-243ENST00000593128 P2RY2P41231 377 aa18.87■□□□□ 0.61
CIRBP-243ENST00000593128 PLA2G4AP47712 749 aa18.87■□□□□ 0.61
CIRBP-243ENST00000593128 EFEMP1Q12805 493 aa18.87■□□□□ 0.61
CIRBP-243ENST00000593128 EDRF1Q3B7T1 1238 aa18.87■□□□□ 0.61
CIRBP-243ENST00000593128 N4BP2L1Q5TBK1 243 aaPredicted RBP18.87■□□□□ 0.61
CIRBP-243ENST00000593128 EGFLAMQ63HQ2 1017 aa18.87■□□□□ 0.61
CIRBP-243ENST00000593128 SDE2Q6IQ49 451 aa18.87■□□□□ 0.61
CIRBP-243ENST00000593128 PSAPL1Q6NUJ1 521 aa18.87■□□□□ 0.61
CIRBP-243ENST00000593128 TADA2BQ86TJ2 420 aa18.87■□□□□ 0.61
CIRBP-243ENST00000593128 CHPFQ8IZ52 775 aa18.87■□□□□ 0.61
CIRBP-243ENST00000593128 ERCC4Q92889 916 aaPredicted RBP18.87■□□□□ 0.61
CIRBP-243ENST00000593128 TMEM176AQ96HP8 235 aa18.87■□□□□ 0.61
CIRBP-243ENST00000593128 ATXN2Q99700 1313 aaKnown RBP18.87■□□□□ 0.61
CIRBP-243ENST00000593128 PNPLA8Q9NP80 782 aa18.87■□□□□ 0.61
CIRBP-243ENST00000593128 RMND1Q9NWS8 449 aa18.87■□□□□ 0.61
CIRBP-243ENST00000593128 RAB20Q9NX57 234 aa18.87■□□□□ 0.61
CIRBP-243ENST00000593128 WDR35Q9P2L0 1181 aa18.87■□□□□ 0.61
CIRBP-243ENST00000593128 CHRM1P11229 460 aaPredicted RBP18.86■□□□□ 0.61
CIRBP-243ENST00000593128 PRCPP42785 496 aa18.86■□□□□ 0.61
CIRBP-243ENST00000593128 KIF11P52732 1056 aa18.86■□□□□ 0.61
CIRBP-243ENST00000593128 BYSLQ13895 437 aaKnown RBP18.86■□□□□ 0.61
CIRBP-243ENST00000593128 UAP1L1Q3KQV9 507 aa18.86■□□□□ 0.61
CIRBP-243ENST00000593128 TOGARAM2Q6ZUX3 1019 aa18.86■□□□□ 0.61
CIRBP-243ENST00000593128 RSRC2Q7L4I2 434 aaKnown RBP18.86■□□□□ 0.61
CIRBP-243ENST00000593128 SCD5Q86SK9 330 aa18.86■□□□□ 0.61
CIRBP-243ENST00000593128 OLIG1Q8TAK6 271 aa18.86■□□□□ 0.61
CIRBP-243ENST00000593128 TATDN2Q93075 761 aa18.86■□□□□ 0.61
CIRBP-243ENST00000593128 ACOX2Q99424 681 aa18.86■□□□□ 0.61
CIRBP-243ENST00000593128 MBD1Q9UIS9 605 aaPredicted RBP18.86■□□□□ 0.61
CIRBP-243ENST00000593128 MYO18AQ92614 2054 aaKnown RBP18.86■□□□□ 0.61
CIRBP-243ENST00000593128 CACNG3O60359 315 aa18.85■□□□□ 0.61
CIRBP-243ENST00000593128 GREM1O60565 184 aa18.85■□□□□ 0.61
CIRBP-243ENST00000593128 NTSR1P30989 418 aa18.85■□□□□ 0.61
CIRBP-243ENST00000593128 PTGER3P43115 390 aa18.85■□□□□ 0.61
CIRBP-243ENST00000593128 DGKGP49619 791 aa18.85■□□□□ 0.61
CIRBP-243ENST00000593128 SLC8A3P57103 927 aa18.85■□□□□ 0.61
CIRBP-243ENST00000593128 ENPEPQ07075 957 aa18.85■□□□□ 0.61
CIRBP-243ENST00000593128 CCDC186Q7Z3E2 898 aa18.85■□□□□ 0.61
CIRBP-243ENST00000593128 SLC4A11Q8NBS3 891 aa18.85■□□□□ 0.61
CIRBP-243ENST00000593128 LSM14BQ9BX40 385 aaKnown RBP18.85■□□□□ 0.61
CIRBP-243ENST00000593128 RAD54BQ9Y620 910 aa18.85■□□□□ 0.61
CIRBP-243ENST00000593128 CEP192Q8TEP8 1941 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 PRRT4C9JH25 899 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 TM4SF5O14894 197 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 STC2O76061 302 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 KCNK5O95279 499 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 CD19P15391 556 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 GABRG2P18507 467 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 CORO1AP31146 461 aaKnown RBP18.84■□□□□ 0.61
CIRBP-243ENST00000593128 MAPK8P45983 427 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 PSEN1P49768 467 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 NOVA1P51513 510 aaKnown RBP18.84■□□□□ 0.61
CIRBP-243ENST00000593128 RAD23BP54727 409 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 IRX4P78413 519 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 RPL6Q02878 288 aaKnown RBP18.84■□□□□ 0.61
CIRBP-243ENST00000593128 LRMPQ12912 555 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 GOLGA7BQ2TAP0 167 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 MAP7D1Q3KQU3 841 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 CBWD6Q4V339 395 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 TRIM61Q5EBN2 209 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 CBWD3Q5JTY5 395 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 CBWD5Q5RIA9 395 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 ZNF658Q5TYW1 1059 aaPredicted RBP18.84■□□□□ 0.61
CIRBP-243ENST00000593128 DAB2IPQ5VWQ8 1189 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 LYSMD4Q5XG99 296 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 ISM2Q6H9L7 571 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 FMR1NBQ8N0W7 255 aaPredicted RBP18.84■□□□□ 0.61
CIRBP-243ENST00000593128 TTC39CQ8N584 583 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 KCNV2Q8TDN2 545 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 SMARCE1Q969G3 411 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 DUSP9Q99956 384 aaKnown RBP18.84■□□□□ 0.61
CIRBP-243ENST00000593128 TMEM9BQ9NQ34 198 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 CALCOCO1Q9P1Z2 691 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 HCN2Q9UL51 889 aa18.84■□□□□ 0.61
CIRBP-243ENST00000593128 TRIM49BA6NDI0 452 aa18.83■□□□□ 0.6
CIRBP-243ENST00000593128 SMC2O95347 1197 aa18.83■□□□□ 0.6
CIRBP-243ENST00000593128 CFIP05156 583 aa18.83■□□□□ 0.6
CIRBP-243ENST00000593128 ANKRD40Q6AI12 368 aa18.83■□□□□ 0.6
CIRBP-243ENST00000593128 KLHDC10Q6PID8 442 aa18.83■□□□□ 0.6
CIRBP-243ENST00000593128 PIGZQ86VD9 579 aa18.83■□□□□ 0.6
CIRBP-243ENST00000593128 NDRG1Q92597 394 aaKnown RBP18.83■□□□□ 0.6
CIRBP-243ENST00000593128 CDK5RAP1Q96SZ6 601 aaKnown RBP18.83■□□□□ 0.6
CIRBP-243ENST00000593128 SLC6A17Q9H1V8 727 aa18.83■□□□□ 0.6
CIRBP-243ENST00000593128 CACNA2D2Q9NY47 1150 aa18.83■□□□□ 0.6
CIRBP-243ENST00000593128 MARK1Q9P0L2 795 aa18.83■□□□□ 0.6
CIRBP-243ENST00000593128 ANGPTL2Q9UKU9 493 aa18.83■□□□□ 0.6
CIRBP-243ENST00000593128 STRIP2Q9ULQ0 834 aa18.83■□□□□ 0.6
CIRBP-243ENST00000593128 TNRC6BQ9UPQ9 1833 aaKnown RBP18.83■□□□□ 0.6
CIRBP-243ENST00000593128 SLC12A8A0AV02 714 aa18.82■□□□□ 0.6
CIRBP-243ENST00000593128 GIPC1O14908 333 aa18.82■□□□□ 0.6
CIRBP-243ENST00000593128 KLKB1P03952 638 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms