RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 SPTA1P02549 2419 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 J3QKU1 62 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 PLK4O00444 970 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 CLDN5O00501 218 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 KIAA0391O15091 583 aaKnown RBP10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 TLX3O43711 291 aaPredicted RBP10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 TNNC2P02585 160 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 ACO1P21399 889 aaKnown RBP10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 LONP1P36776 959 aaKnown RBP10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 CSNK1EP49674 416 aaKnown RBP10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 AFF3P51826 1226 aaKnown RBP10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 SURF1Q15526 300 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 LARP1BQ659C4 914 aaKnown RBP10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 MCTP1Q6DN14 999 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 TPGS1Q6ZTW0 290 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 DYMQ7RTS9 669 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 GPD1LQ8N335 351 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 B3GALNT2Q8NCR0 500 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 OR6B3Q8NGW1 331 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 RASSF8Q8NHQ8 419 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 SCAMP5Q8TAC9 235 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 IGSF8Q969P0 613 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 SIPA1Q96FS4 1042 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 KCNK16Q96T55 309 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 KLF16Q9BXK1 252 aaPredicted RBP10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 B3GNT5Q9BYG0 378 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 TRIM9Q9C026 710 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 THAP10Q9P2Z0 257 aaPredicted RBP10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 SLC27A6Q9Y2P4 619 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 PCDHB13Q9Y5F0 798 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 PCDHGA1Q9Y5H4 931 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 SNX11Q9Y5W9 270 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 PTPRJQ12913 1337 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 KALRNO60229 2985 aa10.72□□□□□ -0.69
SMCO4P1-201ENST00000592909 TEX51A0A1B0GUA7 166 aa10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 RRP8O43159 456 aaKnown RBP10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 PAPSS1O43252 624 aaPredicted RBP10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 TLR5O60602 858 aa10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 IRF1P10914 325 aa10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 CDK4P11802 303 aa10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 GAP43P17677 238 aa10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 IL12RB1P42701 662 aa10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 SLC5A3P53794 718 aa10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 CFHR1Q03591 330 aa10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 ORC1Q13415 861 aa10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 ALCAMQ13740 583 aa10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 SF3A1Q15459 793 aaKnown RBP10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 TEAD4Q15561 434 aa10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 C6orf118Q5T5N4 469 aa10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 GPR155Q7Z3F1 870 aa10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 SYCP3Q8IZU3 236 aa10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 PRCCQ92733 491 aaPredicted RBP10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 FCRL3Q96P31 734 aaPredicted RBP10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 NACA2Q9H009 215 aa10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 DPEP3Q9H4B8 488 aa10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 PCIF1Q9H4Z3 704 aa10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 OLFML3Q9NRN5 406 aa10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 GMIPQ9P107 970 aa10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 ANKRD6Q9Y2G4 727 aa10.71□□□□□ -0.69
SMCO4P1-201ENST00000592909 ZNF233A6NK53 670 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 A8MXQ7 604 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 SYNCRIPO60506 623 aaKnown RBP10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 PRPF6O94906 941 aaKnown RBP10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 GCNT3O95395 438 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 CST3P01034 146 aaPredicted RBP10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 C7P10643 843 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 JUPP14923 745 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 GRIA4P48058 902 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 CCT8P50990 548 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 CASP5P51878 434 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 COPAP53621 1224 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 GRIN1Q05586 938 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 GOLGA8FQ08AF8 430 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 GOLGA8DPQ0D2H9 430 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 RTP5Q14D33 572 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 E2F5Q15329 346 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 INAVAQ3KP66 663 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 CCDC157Q569K6 752 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 PCSK4Q6UW60 755 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 PAQR9Q6ZVX9 377 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 TRAPPC11Q7Z392 1133 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 WDR49Q8IV35 697 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 SNIP1Q8TAD8 396 aaKnown RBP10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 DNAJC19Q96DA6 116 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 NRSN2Q9GZP1 204 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 DMAP1Q9NPF5 467 aaPredicted RBP10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 CYLDQ9NQC7 956 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 TBC1D7Q9P0N9 293 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 FTSJ1Q9UET6 329 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 LSM7Q9UK45 103 aaKnown RBP10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 SLCO1B1Q9Y6L6 691 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 SHROOM3Q8TF72 1996 aa10.7□□□□□ -0.7
SMCO4P1-201ENST00000592909 ATP8B3O60423 1300 aa10.69□□□□□ -0.7
SMCO4P1-201ENST00000592909 H0Y8X5 98 aa10.69□□□□□ -0.7
SMCO4P1-201ENST00000592909 KCNK3O14649 394 aa10.69□□□□□ -0.7
SMCO4P1-201ENST00000592909 DFNA5O60443 496 aa10.69□□□□□ -0.7
SMCO4P1-201ENST00000592909 STAU1O95793 577 aaKnown RBP10.69□□□□□ -0.7
SMCO4P1-201ENST00000592909 TBX18O95935 607 aa10.69□□□□□ -0.7
SMCO4P1-201ENST00000592909 C1SP09871 688 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms