RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 RPS6KL1Q9Y6S9 549 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 C16orf96A6NNT2 1141 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 E7ENQ6 273 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 SEC24DO94855 1032 aaPredicted RBP13.12□□□□□ -0.31
DNMT1-228ENST00000592705 TMCC1O94876 653 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 BGNP21810 368 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 FUT2Q10981 343 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 PGM5Q15124 567 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 FAM171A1Q5VUB5 890 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 C1orf186Q6ZWK4 172 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 CDR2LQ86X02 465 aaPredicted RBP13.12□□□□□ -0.31
DNMT1-228ENST00000592705 FUKQ8N0W3 1084 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 TEKT4Q8WW24 435 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 ADAM2Q99965 735 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 NDUFA13Q9P0J0 144 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 ZNF212Q9UDV6 495 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 ITM2BQ9Y287 266 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 A0A087WZ62 844 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 TIMM44O43615 452 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 AXLP30530 894 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 NUDT2P50583 147 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 MYL6P60660 151 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 SLC20A2Q08357 652 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 STX5Q13190 355 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 FDXACB1Q9BRP7 624 aaPredicted RBP13.12□□□□□ -0.31
DNMT1-228ENST00000592705 SYNPO2Q9UMS6 1093 aa13.12□□□□□ -0.31
DNMT1-228ENST00000592705 NCAM2O15394 837 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 FKBP6O75344 327 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 ANXA9O76027 345 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 POMCP01189 267 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 TGM2P21980 687 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 POLD3Q15054 466 aaPredicted RBP13.11□□□□□ -0.31
DNMT1-228ENST00000592705 SYTL3Q4VX76 610 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 ZCCHC9Q8N567 271 aaKnown RBP13.11□□□□□ -0.31
DNMT1-228ENST00000592705 FAM172AQ8WUF8 416 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 KLRG1Q96E93 195 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 NDFIP2Q9NV92 336 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.11□□□□□ -0.31
DNMT1-228ENST00000592705 UXTQ9UBK9 157 aaPredicted RBP13.11□□□□□ -0.31
DNMT1-228ENST00000592705 CYB561D2O14569 222 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 DRG2P55039 364 aaKnown RBP13.11□□□□□ -0.31
DNMT1-228ENST00000592705 WASHC5Q12768 1159 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 C15orf52Q6ZUT6 534 aaKnown RBP13.11□□□□□ -0.31
DNMT1-228ENST00000592705 C4orf32Q8N8J7 132 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 FBXO22Q8NEZ5 403 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 IPMKQ8NFU5 416 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 ZNF606Q8WXB4 792 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 DDX4Q9NQI0 724 aaKnown RBP13.11□□□□□ -0.31
DNMT1-228ENST00000592705 CLCA2Q9UQC9 943 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 ADH1AP07327 375 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 PECAM1P16284 738 aaPredicted RBP13.11□□□□□ -0.31
DNMT1-228ENST00000592705 TUFMP49411 452 aaKnown RBP13.11□□□□□ -0.31
DNMT1-228ENST00000592705 TRMT5Q32P41 509 aaKnown RBP13.11□□□□□ -0.31
DNMT1-228ENST00000592705 KATNAL2Q8IYT4 538 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 ZNF555Q8NEP9 628 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 RNF217Q8TC41 542 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 BHMTQ93088 406 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 TMEM176AQ96HP8 235 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 FAR2Q96K12 515 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 A1CFQ9NQ94 594 aaKnown RBP13.11□□□□□ -0.31
DNMT1-228ENST00000592705 NCKAP1Q9Y2A7 1128 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 BTBD19C9JJ37 291 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 DGKIO75912 1065 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 AASDHQ4L235 1098 aaPredicted RBP13.11□□□□□ -0.31
DNMT1-228ENST00000592705 EFL1Q7Z2Z2 1120 aaKnown RBP13.11□□□□□ -0.31
DNMT1-228ENST00000592705 MAP4K3Q8IVH8 894 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 DDI1Q8WTU0 396 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 LRRC40Q9H9A6 602 aa13.11□□□□□ -0.31
DNMT1-228ENST00000592705 ASTN1O14525 1302 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 MYO5BQ9ULV0 1848 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 ZNF263O14978 683 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 LZTS3O60299 673 aaPredicted RBP13.1□□□□□ -0.31
DNMT1-228ENST00000592705 MYO1DO94832 1006 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 GJB1P08034 283 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 TCN1P20061 433 aaPredicted RBP13.1□□□□□ -0.31
DNMT1-228ENST00000592705 LHX1P48742 406 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 CASP5P51878 434 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 CNTN2Q02246 1040 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 PTPN11Q06124 597 aaPredicted RBP13.1□□□□□ -0.31
DNMT1-228ENST00000592705 KCNA1Q09470 495 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 LBRQ14739 615 aaKnown RBP13.1□□□□□ -0.31
DNMT1-228ENST00000592705 FAM83EQ2M2I3 478 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 PRAMEF19Q5SWL8 479 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 ERMARDQ5T6L9 678 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 LNX1Q8TBB1 728 aaPredicted RBP13.1□□□□□ -0.31
DNMT1-228ENST00000592705 JADE3Q92613 823 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 PABPC5Q96DU9 382 aaKnown RBP13.1□□□□□ -0.31
DNMT1-228ENST00000592705 CCT7Q99832 543 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 DNAJC16Q9Y2G8 782 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 IFT172Q9UG01 1749 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 GAKO14976 1311 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 SMIM22K7EJ46 135 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 SPTLC1O15269 473 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 CYP1A2P05177 515 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 HMOX2P30519 316 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 TWF1Q12792 350 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 CYLC2Q14093 348 aaPredicted RBP13.1□□□□□ -0.31
DNMT1-228ENST00000592705 BTBD10Q9BSF8 475 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 CHST12Q9NRB3 414 aa13.1□□□□□ -0.31
DNMT1-228ENST00000592705 SCHIP1Q9P0W5 487 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms