RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 NPC1O15118 1278 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 CYP26A1O43174 497 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 MAP3K13O43283 966 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 ZNF217O75362 1048 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 KCNK5O95279 499 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 TBX18O95935 607 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 IRF1P10914 325 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 EPB41P11171 864 aaKnown RBP19.85■□□□□ 0.77
CCDC43-205ENST00000592333 TYRP14679 529 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 BCKDHBP21953 392 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 PMLP29590 882 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 CHKAP35790 457 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 MXI1P50539 228 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 ZNF132P52740 706 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 PPP1R26Q5T8A7 1209 aaPredicted RBP19.85■□□□□ 0.77
CCDC43-205ENST00000592333 PEAR1Q5VY43 1037 aaPredicted RBP19.85■□□□□ 0.77
CCDC43-205ENST00000592333 Q6ZNB5 142 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 RABEPKQ7Z6M1 372 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 SYT12Q8IV01 421 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 GSDMAQ96QA5 445 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 DCLK3Q9C098 648 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 TMEM9BQ9NQ34 198 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 DNAJC17Q9NVM6 304 aaKnown RBP19.85■□□□□ 0.77
CCDC43-205ENST00000592333 FBXO10Q9UK96 956 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 ANGPTL2Q9UKU9 493 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 INVSQ9Y283 1065 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 THADAQ6YHU6 1953 aa19.84■□□□□ 0.77
CCDC43-205ENST00000592333 ABCA7Q8IZY2 2146 aa19.84■□□□□ 0.77
CCDC43-205ENST00000592333 A0A1W2PQH9 124 aa19.84■□□□□ 0.77
CCDC43-205ENST00000592333 TCRBV21S2A2A0A5A6 115 aa19.84■□□□□ 0.77
CCDC43-205ENST00000592333 NEDD8-MDP1E9PL57 170 aa19.84■□□□□ 0.77
CCDC43-205ENST00000592333 AP5Z1O43299 807 aa19.84■□□□□ 0.77
CCDC43-205ENST00000592333 CD58P19256 250 aa19.84■□□□□ 0.77
CCDC43-205ENST00000592333 DHPSP49366 369 aaPredicted RBP19.84■□□□□ 0.77
CCDC43-205ENST00000592333 C10orf120Q5SQS8 335 aa19.84■□□□□ 0.77
CCDC43-205ENST00000592333 N4BP2L1Q5TBK1 243 aaPredicted RBP19.84■□□□□ 0.77
CCDC43-205ENST00000592333 ARHGAP17Q68EM7 881 aa19.84■□□□□ 0.77
CCDC43-205ENST00000592333 TCEAL6Q6IPX3 200 aa19.84■□□□□ 0.77
CCDC43-205ENST00000592333 HMGB4Q8WW32 186 aa19.84■□□□□ 0.77
CCDC43-205ENST00000592333 TCEAL3Q969E4 200 aa19.84■□□□□ 0.77
CCDC43-205ENST00000592333 WBP2Q969T9 261 aa19.84■□□□□ 0.77
CCDC43-205ENST00000592333 TMEM176AQ96HP8 235 aa19.84■□□□□ 0.77
CCDC43-205ENST00000592333 HEXIM2Q96MH2 286 aaKnown RBP19.84■□□□□ 0.77
CCDC43-205ENST00000592333 GABRG3Q99928 467 aa19.84■□□□□ 0.77
CCDC43-205ENST00000592333 GOLPH3LQ9H4A5 285 aa19.84■□□□□ 0.77
CCDC43-205ENST00000592333 NMUR1Q9HB89 426 aa19.84■□□□□ 0.77
CCDC43-205ENST00000592333 CISHQ9NSE2 258 aa19.84■□□□□ 0.77
CCDC43-205ENST00000592333 NAGPAQ9UK23 515 aa19.84■□□□□ 0.77
CCDC43-205ENST00000592333 COQ4Q9Y3A0 265 aa19.84■□□□□ 0.77
CCDC43-205ENST00000592333 LAMA1P25391 3075 aa19.84■□□□□ 0.77
CCDC43-205ENST00000592333 C4orf47A7E2U8 309 aa19.83■□□□□ 0.77
CCDC43-205ENST00000592333 SLC16A3O15427 465 aaKnown RBP19.83■□□□□ 0.77
CCDC43-205ENST00000592333 HOXB2P14652 356 aa19.83■□□□□ 0.77
CCDC43-205ENST00000592333 CSRP1P21291 193 aaKnown RBP19.83■□□□□ 0.77
CCDC43-205ENST00000592333 DGKGP49619 791 aa19.83■□□□□ 0.77
CCDC43-205ENST00000592333 RAB41Q5JT25 222 aa19.83■□□□□ 0.77
CCDC43-205ENST00000592333 SCD5Q86SK9 330 aa19.83■□□□□ 0.77
CCDC43-205ENST00000592333 TTC30AQ86WT1 665 aa19.83■□□□□ 0.77
CCDC43-205ENST00000592333 PGBD3Q8N328 593 aa19.83■□□□□ 0.77
CCDC43-205ENST00000592333 ANKRD52Q8NB46 1076 aa19.83■□□□□ 0.77
CCDC43-205ENST00000592333 CEP76Q8TAP6 659 aa19.83■□□□□ 0.77
CCDC43-205ENST00000592333 NUSAP1Q9BXS6 441 aaKnown RBP19.83■□□□□ 0.77
CCDC43-205ENST00000592333 SLC27A6Q9Y2P4 619 aa19.83■□□□□ 0.77
CCDC43-205ENST00000592333 STC2O76061 302 aa19.82■□□□□ 0.76
CCDC43-205ENST00000592333 CISD3P0C7P0 127 aa19.82■□□□□ 0.76
CCDC43-205ENST00000592333 GABRG2P18507 467 aa19.82■□□□□ 0.76
CCDC43-205ENST00000592333 FKBP3Q00688 224 aaKnown RBP19.82■□□□□ 0.76
CCDC43-205ENST00000592333 ZNF658Q5TYW1 1059 aaPredicted RBP19.82■□□□□ 0.76
CCDC43-205ENST00000592333 SLC23A3Q6PIS1 610 aa19.82■□□□□ 0.76
CCDC43-205ENST00000592333 ZC3H3Q8IXZ2 948 aaKnown RBP19.82■□□□□ 0.76
CCDC43-205ENST00000592333 CHPFQ8IZ52 775 aa19.82■□□□□ 0.76
CCDC43-205ENST00000592333 SLC4A11Q8NBS3 891 aa19.82■□□□□ 0.76
CCDC43-205ENST00000592333 RLN3Q8WXF3 142 aa19.82■□□□□ 0.76
CCDC43-205ENST00000592333 PIGKQ92643 395 aa19.82■□□□□ 0.76
CCDC43-205ENST00000592333 SEMA4DQ92854 862 aa19.82■□□□□ 0.76
CCDC43-205ENST00000592333 TSG101Q99816 390 aa19.82■□□□□ 0.76
CCDC43-205ENST00000592333 MMRN2Q9H8L6 949 aa19.82■□□□□ 0.76
CCDC43-205ENST00000592333 MBD1Q9UIS9 605 aaPredicted RBP19.82■□□□□ 0.76
CCDC43-205ENST00000592333 HCN2Q9UL51 889 aa19.82■□□□□ 0.76
CCDC43-205ENST00000592333 KMT2BQ9UMN6 2715 aaPredicted RBP19.82■□□□□ 0.76
CCDC43-205ENST00000592333 MYO18AQ92614 2054 aaKnown RBP19.82■□□□□ 0.76
CCDC43-205ENST00000592333 A0A1W2PQF6 199 aa19.81■□□□□ 0.76
CCDC43-205ENST00000592333 CDX4O14627 284 aaPredicted RBP19.81■□□□□ 0.76
CCDC43-205ENST00000592333 PENKP01210 267 aaPredicted RBP19.81■□□□□ 0.76
CCDC43-205ENST00000592333 CEACAM1P13688 526 aa19.81■□□□□ 0.76
CCDC43-205ENST00000592333 RAD23BP54727 409 aa19.81■□□□□ 0.76
CCDC43-205ENST00000592333 YWHAEP62258 255 aaKnown RBP19.81■□□□□ 0.76
CCDC43-205ENST00000592333 IRX4P78413 519 aa19.81■□□□□ 0.76
CCDC43-205ENST00000592333 LRRC63Q05C16 580 aa19.81■□□□□ 0.76
CCDC43-205ENST00000592333 LYSMD4Q5XG99 296 aa19.81■□□□□ 0.76
CCDC43-205ENST00000592333 PM20D1Q6GTS8 502 aa19.81■□□□□ 0.76
CCDC43-205ENST00000592333 TPGS1Q6ZTW0 290 aa19.81■□□□□ 0.76
CCDC43-205ENST00000592333 METTL3Q86U44 580 aaKnown RBP19.81■□□□□ 0.76
CCDC43-205ENST00000592333 FMR1NBQ8N0W7 255 aaPredicted RBP19.81■□□□□ 0.76
CCDC43-205ENST00000592333 CPXM2Q8N436 756 aa19.81■□□□□ 0.76
CCDC43-205ENST00000592333 SPATA20Q8TB22 786 aa19.81■□□□□ 0.76
CCDC43-205ENST00000592333 CD248Q9HCU0 757 aa19.81■□□□□ 0.76
CCDC43-205ENST00000592333 HOOK1Q9UJC3 728 aaKnown RBP19.81■□□□□ 0.76
CCDC43-205ENST00000592333 PILRBQ9UKJ0 227 aa19.81■□□□□ 0.76
CCDC43-205ENST00000592333 KIAA1257Q9ULG3 409 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms