RNA–Protein interactions for RNA: ENST00000591598.5

CTDP1-207, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best)

Gene CTDP1, Length 3,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-207ENST00000591598 NRDE2Q9H7Z3 1164 aa17.39■□□□□ 0.37
CTDP1-207ENST00000591598 MCM8Q9UJA3 840 aa17.39■□□□□ 0.37
CTDP1-207ENST00000591598 C2CD2Q9Y426 696 aa17.39■□□□□ 0.37
CTDP1-207ENST00000591598 WDR90Q96KV7 1748 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 DYNC1LI2O43237 492 aaPredicted RBP17.38■□□□□ 0.37
CTDP1-207ENST00000591598 ENTPD5O75356 428 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 RECQL4O94761 1208 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 ACAT1P24752 427 aaKnown RBP17.38■□□□□ 0.37
CTDP1-207ENST00000591598 TMPRSS15P98073 1019 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 INCA1Q0VD86 236 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 ACAP1Q15027 740 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 SOWAHAQ2M3V2 549 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 ANKRD20A3Q5VUR7 823 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 CAND1Q86VP6 1230 aaKnown RBP17.38■□□□□ 0.37
CTDP1-207ENST00000591598 CCNYQ8ND76 341 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 OR6J1Q8NGC5 347 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 MAF1Q9H063 256 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 SMYD2Q9NRG4 433 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 NOP53Q9NZM5 478 aaKnown RBP17.38■□□□□ 0.37
CTDP1-207ENST00000591598 NKX1-2Q9UD57 310 aaPredicted RBP17.38■□□□□ 0.37
CTDP1-207ENST00000591598 AP4E1Q9UPM8 1137 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 CLEC11AQ9Y240 323 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 CREB3O43889 395 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 GOT1P17174 413 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 SERPINB4P48594 390 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 TRIM68Q6AZZ1 485 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 SLC2A14Q8TDB8 520 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 TMEM120AQ9BXJ8 343 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 PIN4Q9Y237 131 aaKnown RBP17.38■□□□□ 0.37
CTDP1-207ENST00000591598 CLNKQ7Z7G1 428 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 SLC26A11Q86WA9 606 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 NME8Q8N427 588 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 PPTC7Q8NI37 304 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 TTC8Q8TAM2 541 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 KHSRPQ92945 711 aaKnown RBP eCLIP17.38■□□□□ 0.37
CTDP1-207ENST00000591598 APOPT1Q96IL0 206 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 SGIP1Q9BQI5 828 aa17.38■□□□□ 0.37
CTDP1-207ENST00000591598 CITO14578 2027 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 TM9SF1O15321 606 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 KRT37O76014 449 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 CSH1P0DML2 217 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 CSH2P0DML3 217 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 MYL2P10916 166 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 SMPD1P17405 629 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 ELF1P32519 619 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 NME3Q13232 169 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 MARCH8Q5T0T0 291 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 CES3Q6UWW8 571 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 DHRS4Q9BTZ2 278 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 PPCSQ9HAB8 311 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 GJD2Q9UKL4 321 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 PDHXO00330 501 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 CLDN5O00501 218 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 CHADO15335 359 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 PITX1P78337 314 aaPredicted RBP17.37■□□□□ 0.37
CTDP1-207ENST00000591598 SNAPC2Q13487 334 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 RIPK1Q13546 671 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 RCN2Q14257 317 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 PDK2Q15119 407 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 FAM187BQ17R55 369 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 HEATR6Q6AI08 1181 aaKnown RBP17.37■□□□□ 0.37
CTDP1-207ENST00000591598 UNC5AQ6ZN44 842 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 FAM13CQ8NE31 585 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 ADAM32Q8TC27 787 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 SLC35F5Q8WV83 523 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 SLC7A6OSQ96CW6 309 aaPredicted RBP17.37■□□□□ 0.37
CTDP1-207ENST00000591598 MYCBPQ99417 103 aaPredicted RBP17.37■□□□□ 0.37
CTDP1-207ENST00000591598 NFKBIZQ9BYH8 718 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 RNF39Q9H2S5 420 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 KANSL3Q9P2N6 904 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 KCNH4Q9UQ05 1017 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 TTLL3Q9Y4R7 772 aa17.37■□□□□ 0.37
CTDP1-207ENST00000591598 BRCA1P38398 1863 aaKnown RBP17.37■□□□□ 0.37
CTDP1-207ENST00000591598 HAUS5O94927 633 aa17.36■□□□□ 0.37
CTDP1-207ENST00000591598 AP1B1Q10567 949 aa17.36■□□□□ 0.37
CTDP1-207ENST00000591598 DCAF6Q58WW2 860 aa17.36■□□□□ 0.37
CTDP1-207ENST00000591598 NDUFAF2Q8N183 169 aa17.36■□□□□ 0.37
CTDP1-207ENST00000591598 DEPDC1BQ8WUY9 529 aa17.36■□□□□ 0.37
CTDP1-207ENST00000591598 ATXN7L3BQ96GX2 97 aa17.36■□□□□ 0.37
CTDP1-207ENST00000591598 NUDCD1Q96RS6 583 aa17.36■□□□□ 0.37
CTDP1-207ENST00000591598 CXorf56Q9H5V9 222 aa17.36■□□□□ 0.37
CTDP1-207ENST00000591598 POPDC2Q9HBU9 364 aa17.36■□□□□ 0.37
CTDP1-207ENST00000591598 ARL8BQ9NVJ2 186 aa17.36■□□□□ 0.37
CTDP1-207ENST00000591598 MRPL42Q9Y6G3 142 aaKnown RBP17.36■□□□□ 0.37
CTDP1-207ENST00000591598 ENDOD1O94919 500 aa17.36■□□□□ 0.37
CTDP1-207ENST00000591598 HOXA11P31270 313 aaPredicted RBP17.36■□□□□ 0.37
CTDP1-207ENST00000591598 GNL1P36915 607 aaPredicted RBP17.36■□□□□ 0.37
CTDP1-207ENST00000591598 GMPRP36959 345 aa17.36■□□□□ 0.37
CTDP1-207ENST00000591598 TTC39BQ5VTQ0 682 aaPredicted RBP17.36■□□□□ 0.37
CTDP1-207ENST00000591598 MAMDC4Q6UXC1 1216 aa17.36■□□□□ 0.37
CTDP1-207ENST00000591598 ALYREFQ86V81 257 aaKnown RBP17.36■□□□□ 0.37
CTDP1-207ENST00000591598 ARID3BQ8IVW6 561 aaPredicted RBP17.36■□□□□ 0.37
CTDP1-207ENST00000591598 BEST2Q8NFU1 509 aa17.36■□□□□ 0.37
CTDP1-207ENST00000591598 ALKBH8Q96BT7 664 aaKnown RBP17.36■□□□□ 0.37
CTDP1-207ENST00000591598 RSRC1Q96IZ7 334 aaKnown RBP17.36■□□□□ 0.37
CTDP1-207ENST00000591598 TBCBQ99426 244 aa17.36■□□□□ 0.37
CTDP1-207ENST00000591598 VPS11Q9H270 941 aa17.36■□□□□ 0.37
CTDP1-207ENST00000591598 SNX25Q9H3E2 840 aa17.36■□□□□ 0.37
CTDP1-207ENST00000591598 VRTNQ9H8Y1 702 aa17.36■□□□□ 0.37
CTDP1-207ENST00000591598 C15orf41Q9Y2V0 281 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms