RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 SMTNL2Q2TAL5 461 aa13.73□□□□□ -0.21
SMARCA4-216ENST00000591545 CCDC157Q569K6 752 aa13.73□□□□□ -0.21
SMARCA4-216ENST00000591545 TJAP1Q5JTD0 557 aa13.73□□□□□ -0.21
SMARCA4-216ENST00000591545 DEPDC1Q5TB30 811 aa13.73□□□□□ -0.21
SMARCA4-216ENST00000591545 RETSATQ6NUM9 610 aa13.73□□□□□ -0.21
SMARCA4-216ENST00000591545 PKN3Q6P5Z2 889 aa13.73□□□□□ -0.21
SMARCA4-216ENST00000591545 SLFN11Q7Z7L1 901 aa13.73□□□□□ -0.21
SMARCA4-216ENST00000591545 TFB1MQ8WVM0 346 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-216ENST00000591545 KBTBD4Q9NVX7 518 aa13.73□□□□□ -0.21
SMARCA4-216ENST00000591545 RRN3Q9NYV6 651 aa13.73□□□□□ -0.21
SMARCA4-216ENST00000591545 PEAK1Q9H792 1746 aa13.73□□□□□ -0.21
SMARCA4-216ENST00000591545 SUPT3HB4E1H0 165 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 FAM86B1E9PN63 330 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 FAM86B2P0C5J1 330 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 CLK1P49759 484 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 TKTL1P51854 596 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 ATXN3P54252 364 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 MRPS6P82932 125 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 PRKCQQ04759 706 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 KRR1Q13601 381 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 PCBP1Q15365 356 aaKnown RBP eCLIP13.72□□□□□ -0.211e-22■■□□□ 12.9
SMARCA4-216ENST00000591545 LRRC6Q86X45 466 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 P3H2Q8IVL5 708 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 CAVIN3Q969G5 261 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 CISHQ9NSE2 258 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 L1RE1Q9UN81 338 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 TIMM13Q9Y5L4 95 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 AKAP12Q02952 1782 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 OCM2P0CE71 109 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 OCMP0CE72 109 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 GZMAP12544 262 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 CTNNB1P35222 781 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 CCL23P55773 120 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 RHOAP61586 193 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 MCL1Q07820 350 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 PABPC1LQ4VXU2 614 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 NLRP9Q7RTR0 991 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 CYP2W1Q8TAV3 490 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 CNDP1Q96KN2 507 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 ELOVL4Q9GZR5 314 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 CD274Q9NZQ7 290 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 BARX2Q9UMQ3 279 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 HEATR9A2RTY3 570 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 ENO4A6NNW6 628 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 GSNP06396 782 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 PKN1Q16512 942 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 HORMAD1Q86X24 394 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 ARID3BQ8IVW6 561 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 FAM9CQ8IZT9 166 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 JADE3Q92613 823 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 TMEM51Q9NW97 253 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 SLCO1B7G3V0H7 640 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 YWHAQP27348 245 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 TMED10P49755 219 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 SOX10P56693 466 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 PDK2Q15119 407 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 COBLL1Q53SF7 1204 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 GALNT4Q8N4A0 578 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 NLGN2Q8NFZ4 835 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 ZNF669Q96BR6 464 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 SMARCD1Q96GM5 515 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 PLEKHA8Q96JA3 519 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 HIC2Q96JB3 615 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 PNKPQ96T60 521 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 INTS13Q9NVM9 706 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 SLC24A2Q9UI40 661 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 DLG5Q8TDM6 1919 aa13.72□□□□□ -0.21
SMARCA4-216ENST00000591545 ADCY6O43306 1168 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 SOAT2O75908 522 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 LSM8O95777 96 aaKnown RBP13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 PSMA4P25789 261 aaKnown RBP13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 WEE1P30291 646 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 CASP4P49662 377 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 DNAJC3Q13217 504 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 AARS2Q5JTZ9 985 aaKnown RBP13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 TTC33Q6PID6 262 aaPredicted RBP13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 ZNF557Q8N988 423 aaPredicted RBP13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 DCLRE1BQ9H816 532 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 PIK3C2AO00443 1686 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 ZBTB22O15209 634 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 SLITRK3O94933 977 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 FKBP9O95302 570 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 SMIM10L2AP0DMW4 78 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 SMIM10L2BP0DMW5 78 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 KCNJ1P48048 391 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 CSTF3Q12996 717 aaKnown RBP13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 GJC2Q5T442 439 aaPredicted RBP13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 FKBP9P1Q75LS8 142 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 PPP1R36Q96LQ0 422 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 TUBGCP4Q9UGJ1 667 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 SOX13Q9UN79 622 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 HPSEQ9Y251 543 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 TIMM44O43615 452 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 PMPCBO75439 489 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 SERPINI2O75830 405 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 CHRM3P20309 590 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 CTCFP49711 727 aaPredicted RBP13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 KLK7P49862 253 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 ILF2Q12905 390 aaKnown RBP13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 UGT3A1Q6NUS8 523 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms