RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-212	ENST00000591107	P2RY2	P41231	377 aa		14	□□□□□ -0.17
NPC1-212	ENST00000591107	MAP3K7CL	P57077	242 aa		14	□□□□□ -0.17
NPC1-212	ENST00000591107	MRPS21	P82921	87 aa	Known RBP	14	□□□□□ -0.17
NPC1-212	ENST00000591107	AMPD3	Q01432	767 aa		14	□□□□□ -0.17
NPC1-212	ENST00000591107	STK4	Q13043	487 aa		14	□□□□□ -0.17
NPC1-212	ENST00000591107	KNOP1	Q1ED39	458 aa	Known RBP	14	□□□□□ -0.17
NPC1-212	ENST00000591107	MAP7D1	Q3KQU3	841 aa		14	□□□□□ -0.17
NPC1-212	ENST00000591107	HECTD3	Q5T447	861 aa		14	□□□□□ -0.17
NPC1-212	ENST00000591107	EGFLAM	Q63HQ2	1017 aa		14	□□□□□ -0.17
NPC1-212	ENST00000591107	CNNM4	Q6P4Q7	775 aa		14	□□□□□ -0.17
NPC1-212	ENST00000591107	TMEM25	Q86YD3	366 aa		14	□□□□□ -0.17
NPC1-212	ENST00000591107	ETFBKMT	Q8IXQ9	262 aa		14	□□□□□ -0.17
NPC1-212	ENST00000591107	C12orf29	Q8N999	325 aa		14	□□□□□ -0.17
NPC1-212	ENST00000591107	WHAMM	Q8TF30	809 aa		14	□□□□□ -0.17
NPC1-212	ENST00000591107	MARVELD3	Q96A59	401 aa		14	□□□□□ -0.17
NPC1-212	ENST00000591107	P2RY11	Q96G91	374 aa		14	□□□□□ -0.17
NPC1-212	ENST00000591107	SMARCD1	Q96GM5	515 aa		14	□□□□□ -0.17
NPC1-212	ENST00000591107	SLC4A5	Q9BY07	1137 aa		14	□□□□□ -0.17
NPC1-212	ENST00000591107	NACA2	Q9H009	215 aa		14	□□□□□ -0.17
NPC1-212	ENST00000591107	OSER1	Q9NX31	292 aa		14	□□□□□ -0.17
NPC1-212	ENST00000591107	EHD2	Q9NZN4	543 aa		14	□□□□□ -0.17
NPC1-212	ENST00000591107	RAD54B	Q9Y620	910 aa		14	□□□□□ -0.17
NPC1-212	ENST00000591107	AKAP13	Q12802	2813 aa		14	□□□□□ -0.17
NPC1-212	ENST00000591107	ATP8B3	O60423	1300 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	MYO18A	Q92614	2054 aa	Known RBP	13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	SLC9A3R1	O14745	358 aa	Predicted RBP	13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	ALDH1A2	O94788	518 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	RTN3	O95197	1032 aa	Predicted RBP	13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	STAU1	O95793	577 aa	Known RBP	13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	C4BPA	P04003	597 aa	Known RBP	13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	TRIM49	P0CI25	452 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	TRIM49C	P0CI26	452 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	ITPKA	P23677	461 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	GRIA2	P42262	883 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	PPP3CC	P48454	512 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	NDST1	P52848	882 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	ZNF445	P59923	1031 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	SHC2	P98077	582 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	GAD2	Q05329	585 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	DPYD	Q12882	1025 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	SASS6	Q6UVJ0	657 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	TPGS1	Q6ZTW0	290 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	TOGARAM2	Q6ZUX3	1019 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	C12orf56	Q8IXR9	622 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	PDZD8	Q8NEN9	1154 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	PARD3B	Q8TEW8	1205 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	SMARCE1	Q969G3	411 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	SPACA7	Q96KW9	195 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	CEP295NL	Q96MC4	621 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	MMRN2	Q9H8L6	949 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	POLM	Q9NP87	494 aa	Predicted RBP	13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	CALCOCO1	Q9P1Z2	691 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	PCDHA5	Q9Y5H7	936 aa		13.99	□□□□□ -0.17
NPC1-212	ENST00000591107	ASCC3	Q8N3C0	2202 aa	Known RBP	13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	CEP192	Q8TEP8	1941 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	E2F8	A0AVK6	867 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	TBC1D3B	A6NDS4	549 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	NEDD8-MDP1	E9PL57	170 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	BIN1	O00499	593 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	TLR5	O60602	858 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	SMC2	O95347	1197 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	CFI	P05156	583 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	ZDHHC11B	P0C7U3	371 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	HOXB2	P14652	356 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	GABRG2	P18507	467 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	ATIC	P31939	592 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	EIF2D	P41214	584 aa	Known RBP	13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	PIK3CA	P42336	1068 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	ASPA	P45381	313 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	KMT5B	Q4FZB7	885 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	EOGT	Q5NDL2	527 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	C1orf220	Q5T0J3	134 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	DAB2IP	Q5VWQ8	1189 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	LYSMD4	Q5XG99	296 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	CEP135	Q66GS9	1140 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	LRSAM1	Q6UWE0	723 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	LPCAT2	Q7L5N7	544 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	TERB1	Q8NA31	727 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	FUCA2	Q9BTY2	467 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	NMUR1	Q9HB89	426 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	SPHK2	Q9NRA0	654 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	EXOC1	Q9NV70	894 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	DNAJC17	Q9NVM6	304 aa	Known RBP	13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	PLK2	Q9NYY3	685 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	WDFY3	Q8IZQ1	3526 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	PCDH15	Q96QU1	1955 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	CHD6	Q8TD26	2715 aa		13.98	□□□□□ -0.17
NPC1-212	ENST00000591107	SPAAR	A0A1B0GVQ0	90 aa		13.97	□□□□□ -0.17
NPC1-212	ENST00000591107	SMAP	O00193	183 aa		13.97	□□□□□ -0.17
NPC1-212	ENST00000591107	HOXC11	O43248	304 aa	Predicted RBP	13.97	□□□□□ -0.17
NPC1-212	ENST00000591107	GREM1	O60565	184 aa		13.97	□□□□□ -0.17
NPC1-212	ENST00000591107	HLA-DRA	P01903	254 aa		13.97	□□□□□ -0.17
NPC1-212	ENST00000591107	NR3C1	P04150	777 aa		13.97	□□□□□ -0.17
NPC1-212	ENST00000591107	MYL1	P05976	194 aa		13.97	□□□□□ -0.17
NPC1-212	ENST00000591107	ENG	P17813	658 aa		13.97	□□□□□ -0.17
NPC1-212	ENST00000591107	CD58	P19256	250 aa		13.97	□□□□□ -0.17
NPC1-212	ENST00000591107	RPL6	Q02878	288 aa	Known RBP	13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms