RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 GPR37L1O60883 481 aa22.28■■□□□ 1.16
ATG4D-212ENST00000590096 CYP1A1P04798 512 aaPredicted RBP22.28■■□□□ 1.16
ATG4D-212ENST00000590096 NCAM1P13591 858 aa22.28■■□□□ 1.16
ATG4D-212ENST00000590096 TNK2Q07912 1038 aa22.28■■□□□ 1.16
ATG4D-212ENST00000590096 ITPRIPL2Q3MIP1 535 aa22.28■■□□□ 1.16
ATG4D-212ENST00000590096 EFHC1Q5JVL4 640 aa22.28■■□□□ 1.16
ATG4D-212ENST00000590096 SPECC1LQ69YQ0 1117 aa22.28■■□□□ 1.16
ATG4D-212ENST00000590096 SARM1Q6SZW1 724 aa22.28■■□□□ 1.16
ATG4D-212ENST00000590096 FAM183BPQ6ZVS7 135 aa22.28■■□□□ 1.16
ATG4D-212ENST00000590096 IRF2BP2Q7Z5L9 587 aa22.28■■□□□ 1.16
ATG4D-212ENST00000590096 ZDHHC17Q8IUH5 632 aa22.28■■□□□ 1.16
ATG4D-212ENST00000590096 ATP2A3Q93084 1043 aa22.28■■□□□ 1.16
ATG4D-212ENST00000590096 PBXIP1Q96AQ6 731 aa22.28■■□□□ 1.16
ATG4D-212ENST00000590096 C18orf8Q96DM3 657 aa22.28■■□□□ 1.16
ATG4D-212ENST00000590096 TRIM5Q9C035 493 aa22.28■■□□□ 1.16
ATG4D-212ENST00000590096 POPDC2Q9HBU9 364 aa22.28■■□□□ 1.16
ATG4D-212ENST00000590096 GTSE1Q9NYZ3 720 aa22.28■■□□□ 1.16
ATG4D-212ENST00000590096 CAPN11Q9UMQ6 739 aa22.28■■□□□ 1.16
ATG4D-212ENST00000590096 LUC7L2Q9Y383 392 aaKnown RBP22.28■■□□□ 1.16
ATG4D-212ENST00000590096 PIAS3Q9Y6X2 628 aa22.28■■□□□ 1.16
ATG4D-212ENST00000590096 TRIOO75962 3097 aa22.28■■□□□ 1.16
ATG4D-212ENST00000590096 SLC12A8A0AV02 714 aa22.27■■□□□ 1.16
ATG4D-212ENST00000590096 STK25O00506 426 aa22.27■■□□□ 1.16
ATG4D-212ENST00000590096 SCAMP3O14828 347 aaKnown RBP22.27■■□□□ 1.16
ATG4D-212ENST00000590096 GLI1P08151 1106 aa22.27■■□□□ 1.16
ATG4D-212ENST00000590096 COL4A2P08572 1712 aa22.27■■□□□ 1.16
ATG4D-212ENST00000590096 GABRB2P47870 512 aa22.27■■□□□ 1.16
ATG4D-212ENST00000590096 YWHAZP63104 245 aaKnown RBP22.27■■□□□ 1.16
ATG4D-212ENST00000590096 ZBED6P86452 979 aa22.27■■□□□ 1.16
ATG4D-212ENST00000590096 RUNX3Q13761 415 aa22.27■■□□□ 1.16
ATG4D-212ENST00000590096 TRIM14Q14142 442 aa22.27■■□□□ 1.16
ATG4D-212ENST00000590096 IER5LQ5T953 404 aa22.27■■□□□ 1.16
ATG4D-212ENST00000590096 TPRG1Q6ZUI0 275 aa22.27■■□□□ 1.16
ATG4D-212ENST00000590096 GAS2L3Q86XJ1 694 aa22.27■■□□□ 1.16
ATG4D-212ENST00000590096 CPA6Q8N4T0 437 aa22.27■■□□□ 1.16
ATG4D-212ENST00000590096 TTC8Q8TAM2 541 aa22.27■■□□□ 1.16
ATG4D-212ENST00000590096 C8orf33Q9H7E9 229 aaPredicted RBP22.27■■□□□ 1.16
ATG4D-212ENST00000590096 HPS4Q9NQG7 708 aa22.27■■□□□ 1.16
ATG4D-212ENST00000590096 ASNSD1Q9NWL6 643 aa22.27■■□□□ 1.16
ATG4D-212ENST00000590096 FAM170AA1A519 330 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 HSF2BPO75031 334 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 NFATC1O95644 943 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 GYPCP04921 128 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 HMBSP08397 361 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 TPM1P09493 284 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 GLULP15104 373 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 ARSAP15289 507 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 TNFAIP3P21580 790 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 NSFP46459 744 aaKnown RBP22.26■■□□□ 1.15
ATG4D-212ENST00000590096 SLC6A3Q01959 620 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 KLHL30Q0D2K2 578 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 NR1H3Q13133 447 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 EML3Q32P44 896 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 MSANTD2Q6P1R3 559 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 BEND5Q7L4P6 421 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 BMP8AQ7Z5Y6 402 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 VSTM4Q8IW00 320 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 FLCNQ8NFG4 579 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 OTUB2Q96DC9 234 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 MSANTD3Q96H12 275 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 PIWIL1Q96J94 861 aaKnown RBP22.26■■□□□ 1.15
ATG4D-212ENST00000590096 PCDHB18PQ96TA0 734 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 LRFN3Q9BTN0 628 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 DCLK3Q9C098 648 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 LINC00597Q9H2U6 94 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 C11orf16Q9NQ32 467 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 SFMBT1Q9UHJ3 866 aa22.26■■□□□ 1.15
ATG4D-212ENST00000590096 PIEZO1Q92508 2521 aa22.25■■□□□ 1.15
ATG4D-212ENST00000590096 PRR33A8MZF0 331 aa22.25■■□□□ 1.15
ATG4D-212ENST00000590096 PDGFBP01127 241 aaPredicted RBP22.25■■□□□ 1.15
ATG4D-212ENST00000590096 CASP14P31944 242 aa22.25■■□□□ 1.15
ATG4D-212ENST00000590096 PRKCIP41743 596 aa22.25■■□□□ 1.15
ATG4D-212ENST00000590096 MLLT6P55198 1093 aaPredicted RBP22.25■■□□□ 1.15
ATG4D-212ENST00000590096 STARD6P59095 220 aa22.25■■□□□ 1.15
ATG4D-212ENST00000590096 CLEC16AQ2KHT3 1053 aa22.25■■□□□ 1.15
ATG4D-212ENST00000590096 OLFML1Q6UWY5 402 aa22.25■■□□□ 1.15
ATG4D-212ENST00000590096 HTR3DQ70Z44 454 aa22.25■■□□□ 1.15
ATG4D-212ENST00000590096 SYN2Q92777 582 aaPredicted RBP22.25■■□□□ 1.15
ATG4D-212ENST00000590096 WBP2Q969T9 261 aa22.25■■□□□ 1.15
ATG4D-212ENST00000590096 PLD4Q96BZ4 506 aa22.25■■□□□ 1.15
ATG4D-212ENST00000590096 HAUS4Q9H6D7 363 aa22.25■■□□□ 1.15
ATG4D-212ENST00000590096 ECT2Q9H8V3 914 aa22.25■■□□□ 1.15
ATG4D-212ENST00000590096 TBC1D17Q9HA65 648 aa22.25■■□□□ 1.15
ATG4D-212ENST00000590096 NAALADL1Q9UQQ1 740 aa22.25■■□□□ 1.15
ATG4D-212ENST00000590096 HBS1LQ9Y450 684 aaKnown RBP22.25■■□□□ 1.15
ATG4D-212ENST00000590096 MUC6Q6W4X9 2439 aa22.24■■□□□ 1.15
ATG4D-212ENST00000590096 MAN2B1O00754 1011 aa22.24■■□□□ 1.15
ATG4D-212ENST00000590096 STC2O76061 302 aa22.24■■□□□ 1.15
ATG4D-212ENST00000590096 FYNP06241 537 aa22.24■■□□□ 1.15
ATG4D-212ENST00000590096 UNGP13051 313 aaPredicted RBP22.24■■□□□ 1.15
ATG4D-212ENST00000590096 AMPD2Q01433 879 aa22.24■■□□□ 1.15
ATG4D-212ENST00000590096 CENPCQ03188 943 aa22.24■■□□□ 1.15
ATG4D-212ENST00000590096 TAF5Q15542 800 aa22.24■■□□□ 1.15
ATG4D-212ENST00000590096 TDRD12Q587J7 1177 aaKnown RBP22.24■■□□□ 1.15
ATG4D-212ENST00000590096 E4F1Q66K89 784 aaPredicted RBP22.24■■□□□ 1.15
ATG4D-212ENST00000590096 C1orf228Q6PIY5 440 aa22.24■■□□□ 1.15
ATG4D-212ENST00000590096 ZNF852Q6ZMS4 543 aa22.24■■□□□ 1.15
ATG4D-212ENST00000590096 MMS22LQ6ZRQ5 1243 aa22.24■■□□□ 1.15
ATG4D-212ENST00000590096 SLC26A9Q7LBE3 791 aa22.24■■□□□ 1.15
ATG4D-212ENST00000590096 RALGPS2Q86X27 583 aaPredicted RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms