RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 FAM92AA1XBS5 289 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 GTPBP10A4D1E9 387 aaKnown RBP10.91□□□□□ -0.66
SDF2-208ENST00000589788 FAM170BA6NMN3 283 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 HHLA1C9JL84 531 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 ARNTLO00327 626 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 NCAM2O15394 837 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 CYP26A1O43174 497 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 OAS1P00973 400 aaKnown RBP10.91□□□□□ -0.66
SDF2-208ENST00000589788 DCNP07585 359 aaKnown RBP10.91□□□□□ -0.66
SDF2-208ENST00000589788 TPM2P07951 284 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 SLC9A1P19634 815 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 EEF1GP26641 437 aaKnown RBP10.91□□□□□ -0.66
SDF2-208ENST00000589788 IFNAR2P48551 515 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 TUBP50607 506 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 KIF11P52732 1056 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 BCAT1P54687 386 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 MLLT6P55198 1093 aaPredicted RBP10.91□□□□□ -0.66
SDF2-208ENST00000589788 SLC7A9P82251 487 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 BST2Q10589 180 aaKnown RBP10.91□□□□□ -0.66
SDF2-208ENST00000589788 CBLBQ13191 982 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 PDGFRLQ15198 375 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 STILQ15468 1287 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 ZNF77Q15935 545 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 ITPRIPL2Q3MIP1 535 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 ANO6Q4KMQ2 910 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 TCP11X2Q5H9J9 407 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 SNX30Q5VWJ9 437 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 C1orf228Q6PIY5 440 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 PIGZQ86VD9 579 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 DDX42Q86XP3 938 aaKnown RBP eCLIP10.91□□□□□ -0.66
SDF2-208ENST00000589788 TTC8Q8TAM2 541 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 FAM3CQ92520 227 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 ITPKCQ96DU7 683 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 KREMEN1Q96MU8 473 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 DDX23Q9BUQ8 820 aaKnown RBP10.91□□□□□ -0.66
SDF2-208ENST00000589788 OSBPL6Q9BZF3 934 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 UBXN6Q9BZV1 441 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 RNF38Q9H0F5 515 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 EBF3Q9H4W6 596 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 C8orf33Q9H7E9 229 aaPredicted RBP10.91□□□□□ -0.66
SDF2-208ENST00000589788 LTB4R2Q9NPC1 389 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 DUS2Q9NX74 493 aaKnown RBP10.91□□□□□ -0.66
SDF2-208ENST00000589788 SMPD4Q9NXE4 827 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 TOR4AQ9NXH8 423 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 GTSE1Q9NYZ3 720 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 APEX2Q9UBZ4 518 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 NDRG2Q9UN36 371 aaKnown RBP10.91□□□□□ -0.66
SDF2-208ENST00000589788 CPQQ9Y646 472 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 COL4A2P08572 1712 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 KIF26AQ9ULI4 1882 aaPredicted RBP10.91□□□□□ -0.66
SDF2-208ENST00000589788 COL4A3Q01955 1670 aa10.91□□□□□ -0.66
SDF2-208ENST00000589788 SPECC1L-ADORA2AF8WAN1 911 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 LEFTY2O00292 366 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 O00370 1275 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 XPO1O14980 1071 aaKnown RBP10.9□□□□□ -0.66
SDF2-208ENST00000589788 COCHO43405 550 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 OLFM2O95897 454 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 IL2RAP01589 272 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 ZDHHC11BP0C7U3 371 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 SETSIPP0DME0 302 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 TCF3P15923 654 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 PON1P27169 355 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 USP8P40818 1118 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 FOXK2Q01167 660 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 TNK2Q07912 1038 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 RUNX3Q13761 415 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 ARHGAP44Q17R89 818 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 TRIM68Q6AZZ1 485 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 LCLAT1Q6UWP7 414 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 CAPN12Q6ZSI9 719 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 C11orf57Q6ZUT1 292 aaPredicted RBP10.9□□□□□ -0.66
SDF2-208ENST00000589788 TADA2BQ86TJ2 420 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 TTC30AQ86WT1 665 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 RALGPS2Q86X27 583 aaPredicted RBP10.9□□□□□ -0.66
SDF2-208ENST00000589788 CCDC105Q8IYK2 499 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 CPA6Q8N4T0 437 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 DTWD2Q8NBA8 298 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 ANKRD20A12PQ8NF67 263 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 UBA3Q8TBC4 463 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 OSCP1Q8WVF1 389 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 TFAP2BQ92481 460 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 ATP2A3Q93084 1043 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 FAM83CQ9BQN1 747 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 NAT10Q9H0A0 1025 aaKnown RBP10.9□□□□□ -0.66
SDF2-208ENST00000589788 CCSER2Q9H7U1 834 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 LRRC4Q9HBW1 653 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 NAGPAQ9UK23 515 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 MTF2Q9Y483 593 aaPredicted RBP10.9□□□□□ -0.66
SDF2-208ENST00000589788 HRH3Q9Y5N1 445 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 WASF2Q9Y6W5 498 aa10.9□□□□□ -0.66
SDF2-208ENST00000589788 F5P12259 2224 aa10.9□□□□□ -0.67
SDF2-208ENST00000589788 A0A1W2PQH9 124 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 M0QYV0 167 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 RNF225M0QZC1 329 aaPredicted RBP10.89□□□□□ -0.67
SDF2-208ENST00000589788 SLC9A3R1O14745 358 aaPredicted RBP10.89□□□□□ -0.67
SDF2-208ENST00000589788 MED7O43513 233 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 TLR5O60602 858 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 RALAP11233 206 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 ARSAP15289 507 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 BRD2P25440 801 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms