RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 TIGD1Q96MW7 591 aa12.86□□□□□ -0.35
VAT1-206ENST00000589709 XPO6Q96QU8 1125 aaKnown RBP12.86□□□□□ -0.35
VAT1-206ENST00000589709 TSG101Q99816 390 aa12.86□□□□□ -0.35
VAT1-206ENST00000589709 NAGPAQ9UK23 515 aa12.86□□□□□ -0.35
VAT1-206ENST00000589709 INVSQ9Y283 1065 aa12.86□□□□□ -0.35
VAT1-206ENST00000589709 ABCA7Q8IZY2 2146 aa12.85□□□□□ -0.35
VAT1-206ENST00000589709 GOLGA6L4A6NEF3 574 aa12.85□□□□□ -0.35
VAT1-206ENST00000589709 TYRP14679 529 aa12.85□□□□□ -0.35
VAT1-206ENST00000589709 BCKDHBP21953 392 aa12.85□□□□□ -0.35
VAT1-206ENST00000589709 NUCB2P80303 420 aa12.85□□□□□ -0.35
VAT1-206ENST00000589709 COG7P83436 770 aa12.85□□□□□ -0.35
VAT1-206ENST00000589709 LRRC63Q05C16 580 aa12.85□□□□□ -0.35
VAT1-206ENST00000589709 MAP7D1Q3KQU3 841 aa12.85□□□□□ -0.35
VAT1-206ENST00000589709 ZNF394Q53GI3 561 aa12.85□□□□□ -0.35
VAT1-206ENST00000589709 RAB41Q5JT25 222 aa12.85□□□□□ -0.35
VAT1-206ENST00000589709 C10orf120Q5SQS8 335 aa12.85□□□□□ -0.35
VAT1-206ENST00000589709 C10orf76Q5T2E6 689 aa12.85□□□□□ -0.35
VAT1-206ENST00000589709 ANKRD40Q6AI12 368 aa12.85□□□□□ -0.35
VAT1-206ENST00000589709 ELOA2Q8IYF1 753 aaPredicted RBP12.85□□□□□ -0.35
VAT1-206ENST00000589709 ARHGAP18Q8N392 663 aa12.85□□□□□ -0.35
VAT1-206ENST00000589709 ZNF513Q8N8E2 541 aaPredicted RBP12.85□□□□□ -0.35
VAT1-206ENST00000589709 ANKRD52Q8NB46 1076 aa12.85□□□□□ -0.35
VAT1-206ENST00000589709 TATDN2Q93075 761 aa12.85□□□□□ -0.35
VAT1-206ENST00000589709 BBS2Q9BXC9 721 aa12.85□□□□□ -0.35
VAT1-206ENST00000589709 SMOC1Q9H4F8 434 aa12.85□□□□□ -0.35
VAT1-206ENST00000589709 HCN2Q9UL51 889 aa12.85□□□□□ -0.35
VAT1-206ENST00000589709 ZNF510Q9Y2H8 683 aa12.85□□□□□ -0.35
VAT1-206ENST00000589709 MYO18AQ92614 2054 aaKnown RBP12.84□□□□□ -0.35
VAT1-206ENST00000589709 MYH10P35580 1976 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 NEDD8-MDP1E9PL57 170 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 TRIM24O15164 1050 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 STC2O76061 302 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 CISD3P0C7P0 127 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 NTSR1P30989 418 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 SLC8A3P57103 927 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 CBWD6Q4V339 395 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 CBWD3Q5JTY5 395 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 CBWD5Q5RIA9 395 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 RNF43Q68DV7 783 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 PM20D1Q6GTS8 502 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 TCEAL6Q6IPX3 200 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 LPCAT2Q7L5N7 544 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 PIGZQ86VD9 579 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 TTC30AQ86WT1 665 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 TCEAL3Q969E4 200 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 SMARCE1Q969G3 411 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 SPACA7Q96KW9 195 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 ARID3AQ99856 593 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 LSM14BQ9BX40 385 aaKnown RBP12.84□□□□□ -0.35
VAT1-206ENST00000589709 DCLK3Q9C098 648 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 DNAJC17Q9NVM6 304 aaKnown RBP12.84□□□□□ -0.35
VAT1-206ENST00000589709 BCCIPQ9P287 314 aaKnown RBP eCLIP12.84□□□□□ -0.35
VAT1-206ENST00000589709 ARMCX3Q9UH62 379 aaPredicted RBP12.84□□□□□ -0.35
VAT1-206ENST00000589709 HOOK1Q9UJC3 728 aaKnown RBP12.84□□□□□ -0.35
VAT1-206ENST00000589709 FBXO10Q9UK96 956 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 NUDT5Q9UKK9 219 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 KIAA1257Q9ULG3 409 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 ACACBO00763 2458 aa12.84□□□□□ -0.35
VAT1-206ENST00000589709 A0A1W2PQF6 199 aa12.83□□□□□ -0.36
VAT1-206ENST00000589709 TCRBV21S2A2A0A5A6 115 aa12.83□□□□□ -0.36
VAT1-206ENST00000589709 KHNYNO15037 678 aaKnown RBP12.83□□□□□ -0.36
VAT1-206ENST00000589709 MDM4O15151 490 aa12.83□□□□□ -0.36
VAT1-206ENST00000589709 PMM2O15305 246 aa12.83□□□□□ -0.36
VAT1-206ENST00000589709 MAP3K13O43283 966 aa12.83□□□□□ -0.36
VAT1-206ENST00000589709 PENKP01210 267 aaPredicted RBP12.83□□□□□ -0.36
VAT1-206ENST00000589709 KLKB1P03952 638 aa12.83□□□□□ -0.36
VAT1-206ENST00000589709 CHKAP35790 457 aa12.83□□□□□ -0.36
VAT1-206ENST00000589709 DPP6P42658 865 aa12.83□□□□□ -0.36
VAT1-206ENST00000589709 PMS1P54277 932 aaKnown RBP12.83□□□□□ -0.36
VAT1-206ENST00000589709 YWHAEP62258 255 aaKnown RBP12.83□□□□□ -0.36
VAT1-206ENST00000589709 CUL2Q13617 745 aa12.83□□□□□ -0.36
VAT1-206ENST00000589709 TCERG1LQ5VWI1 586 aa12.83□□□□□ -0.36
VAT1-206ENST00000589709 SDE2Q6IQ49 451 aa12.83□□□□□ -0.36
VAT1-206ENST00000589709 TPGS1Q6ZTW0 290 aa12.83□□□□□ -0.36
VAT1-206ENST00000589709 CYP2U1Q7Z449 544 aa12.83□□□□□ -0.36
VAT1-206ENST00000589709 MIB1Q86YT6 1006 aa12.83□□□□□ -0.36
VAT1-206ENST00000589709 HMGB4Q8WW32 186 aa12.83□□□□□ -0.36
VAT1-206ENST00000589709 RLN3Q8WXF3 142 aa12.83□□□□□ -0.36
VAT1-206ENST00000589709 SLC35C1Q96A29 364 aa12.83□□□□□ -0.36
VAT1-206ENST00000589709 DHTKD1Q96HY7 919 aaPredicted RBP12.83□□□□□ -0.36
VAT1-206ENST00000589709 GABRG3Q99928 467 aa12.83□□□□□ -0.36
VAT1-206ENST00000589709 EDEM2Q9BV94 578 aa12.83□□□□□ -0.36
VAT1-206ENST00000589709 METTL14Q9HCE5 456 aaKnown RBP12.83□□□□□ -0.36
VAT1-206ENST00000589709 ZDHHC4Q9NPG8 344 aa12.83□□□□□ -0.36
VAT1-206ENST00000589709 SLC27A6Q9Y2P4 619 aa12.83□□□□□ -0.36
VAT1-206ENST00000589709 LNP1A1A4G5 178 aa12.82□□□□□ -0.36
VAT1-206ENST00000589709 PRRT4C9JH25 899 aa12.82□□□□□ -0.36
VAT1-206ENST00000589709 GFRA2O00451 464 aa12.82□□□□□ -0.36
VAT1-206ENST00000589709 ZBTB24O43167 697 aaPredicted RBP12.82□□□□□ -0.36
VAT1-206ENST00000589709 ZBED1O96006 694 aa12.82□□□□□ -0.36
VAT1-206ENST00000589709 HOXB2P14652 356 aa12.82□□□□□ -0.36
VAT1-206ENST00000589709 GABRG2P18507 467 aa12.82□□□□□ -0.36
VAT1-206ENST00000589709 PPP1R2P41236 205 aa12.82□□□□□ -0.36
VAT1-206ENST00000589709 DHPSP49366 369 aaPredicted RBP12.82□□□□□ -0.36
VAT1-206ENST00000589709 DGKGP49619 791 aa12.82□□□□□ -0.36
VAT1-206ENST00000589709 EFEMP1Q12805 493 aa12.82□□□□□ -0.36
VAT1-206ENST00000589709 DCAF17Q5H9S7 520 aaPredicted RBP12.82□□□□□ -0.36
VAT1-206ENST00000589709 EGFLAMQ63HQ2 1017 aa12.82□□□□□ -0.36
VAT1-206ENST00000589709 FOXR2Q6PJQ5 311 aa12.82□□□□□ -0.36
VAT1-206ENST00000589709 CHPFQ8IZ52 775 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms