RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 FAM193AP78312 1265 aa19.45■□□□□ 0.7
CCDC43-204ENST00000588687 INCA1Q0VD86 236 aa19.45■□□□□ 0.7
CCDC43-204ENST00000588687 SPOPLQ6IQ16 392 aa19.45■□□□□ 0.7
CCDC43-204ENST00000588687 SLC36A4Q6YBV0 504 aa19.45■□□□□ 0.7
CCDC43-204ENST00000588687 UNC93AQ86WB7 457 aa19.45■□□□□ 0.7
CCDC43-204ENST00000588687 OR2I1PQ8NGU4 316 aa19.45■□□□□ 0.7
CCDC43-204ENST00000588687 CEP76Q8TAP6 659 aa19.45■□□□□ 0.7
CCDC43-204ENST00000588687 IPO4Q8TEX9 1081 aaKnown RBP19.45■□□□□ 0.7
CCDC43-204ENST00000588687 BBS2Q9BXC9 721 aa19.45■□□□□ 0.7
CCDC43-204ENST00000588687 BACH2Q9BYV9 841 aa19.45■□□□□ 0.7
CCDC43-204ENST00000588687 TLR8Q9NR97 1041 aaKnown RBP19.45■□□□□ 0.7
CCDC43-204ENST00000588687 PCDHA7Q9UN72 937 aa19.45■□□□□ 0.7
CCDC43-204ENST00000588687 ACTN4O43707 911 aaKnown RBP19.44■□□□□ 0.7
CCDC43-204ENST00000588687 GJB3O75712 270 aa19.44■□□□□ 0.7
CCDC43-204ENST00000588687 CD59P13987 128 aa19.44■□□□□ 0.7
CCDC43-204ENST00000588687 KLHDC10Q6PID8 442 aa19.44■□□□□ 0.7
CCDC43-204ENST00000588687 SV2AQ7L0J3 742 aa19.44■□□□□ 0.7
CCDC43-204ENST00000588687 MINDY1Q8N5J2 469 aa19.44■□□□□ 0.7
CCDC43-204ENST00000588687 TAF4BQ92750 862 aa19.44■□□□□ 0.7
CCDC43-204ENST00000588687 MRGPRX1Q96LB2 322 aa19.44■□□□□ 0.7
CCDC43-204ENST00000588687 NACA2Q9H009 215 aa19.44■□□□□ 0.7
CCDC43-204ENST00000588687 SLC6A17Q9H1V8 727 aa19.44■□□□□ 0.7
CCDC43-204ENST00000588687 SLC32A1Q9H598 525 aa19.44■□□□□ 0.7
CCDC43-204ENST00000588687 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.44■□□□□ 0.7
CCDC43-204ENST00000588687 FBXO10Q9UK96 956 aa19.44■□□□□ 0.7
CCDC43-204ENST00000588687 CKAP5Q14008 2032 aa19.44■□□□□ 0.7
CCDC43-204ENST00000588687 MUC22E2RYF6 1773 aaPredicted RBP19.43■□□□□ 0.7
CCDC43-204ENST00000588687 SRRM3A6NNA2 597 aaPredicted RBP19.43■□□□□ 0.7
CCDC43-204ENST00000588687 MDM4O15151 490 aa19.43■□□□□ 0.7
CCDC43-204ENST00000588687 FAM200BP0CF97 657 aa19.43■□□□□ 0.7
CCDC43-204ENST00000588687 SIM1P81133 766 aaPredicted RBP19.43■□□□□ 0.7
CCDC43-204ENST00000588687 SGSM1Q2NKQ1 1148 aa19.43■□□□□ 0.7
CCDC43-204ENST00000588687 TPGS1Q6ZTW0 290 aa19.43■□□□□ 0.7
CCDC43-204ENST00000588687 CHPFQ8IZ52 775 aa19.43■□□□□ 0.7
CCDC43-204ENST00000588687 TMC2Q8TDI7 906 aa19.43■□□□□ 0.7
CCDC43-204ENST00000588687 ERLEC1Q96DZ1 483 aa19.43■□□□□ 0.7
CCDC43-204ENST00000588687 HSPA12BQ96MM6 686 aa19.43■□□□□ 0.7
CCDC43-204ENST00000588687 HNRNPABQ99729 332 aaKnown RBP19.43■□□□□ 0.7
CCDC43-204ENST00000588687 GTPBP2Q9BX10 602 aaKnown RBP19.43■□□□□ 0.7
CCDC43-204ENST00000588687 APOBEC3GQ9HC16 384 aaKnown RBP19.43■□□□□ 0.7
CCDC43-204ENST00000588687 PNPLA8Q9NP80 782 aa19.43■□□□□ 0.7
CCDC43-204ENST00000588687 DNAAF2Q9NVR5 837 aaKnown RBP19.43■□□□□ 0.7
CCDC43-204ENST00000588687 CACNA2D2Q9NY47 1150 aa19.43■□□□□ 0.7
CCDC43-204ENST00000588687 CYP8B1Q9UNU6 501 aa19.43■□□□□ 0.7
CCDC43-204ENST00000588687 MSRB2Q9Y3D2 182 aa19.43■□□□□ 0.7
CCDC43-204ENST00000588687 RAD54BQ9Y620 910 aa19.43■□□□□ 0.7
CCDC43-204ENST00000588687 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.42■□□□□ 0.7
CCDC43-204ENST00000588687 A0A1W2PQD8 194 aa19.42■□□□□ 0.7
CCDC43-204ENST00000588687 FAM221BA6H8Z2 402 aa19.42■□□□□ 0.7
CCDC43-204ENST00000588687 ARHGAP33O14559 1287 aa19.42■□□□□ 0.7
CCDC43-204ENST00000588687 ZNF217O75362 1048 aa19.42■□□□□ 0.7
CCDC43-204ENST00000588687 NR3C1P04150 777 aa19.42■□□□□ 0.7
CCDC43-204ENST00000588687 CAPNS1P04632 268 aa19.42■□□□□ 0.7
CCDC43-204ENST00000588687 RPN1P04843 607 aaKnown RBP19.42■□□□□ 0.7
CCDC43-204ENST00000588687 ADORA2BP29275 332 aa19.42■□□□□ 0.7
CCDC43-204ENST00000588687 ATP5C1P36542 298 aaKnown RBP19.42■□□□□ 0.7
CCDC43-204ENST00000588687 GFPT1Q06210 699 aaPredicted RBP19.42■□□□□ 0.7
CCDC43-204ENST00000588687 NUDT18Q6ZVK8 323 aa19.42■□□□□ 0.7
CCDC43-204ENST00000588687 RABEPKQ7Z6M1 372 aa19.42■□□□□ 0.7
CCDC43-204ENST00000588687 SCD5Q86SK9 330 aa19.42■□□□□ 0.7
CCDC43-204ENST00000588687 TRIML1Q8N9V2 468 aa19.42■□□□□ 0.7
CCDC43-204ENST00000588687 ZCCHC14Q8WYQ9 949 aaKnown RBP19.42■□□□□ 0.7
CCDC43-204ENST00000588687 ZNF419Q96HQ0 510 aaPredicted RBP19.42■□□□□ 0.7
CCDC43-204ENST00000588687 XPO6Q96QU8 1125 aaKnown RBP19.42■□□□□ 0.7
CCDC43-204ENST00000588687 WDR35Q9P2L0 1181 aa19.42■□□□□ 0.7
CCDC43-204ENST00000588687 PCDHA5Q9Y5H7 936 aa19.42■□□□□ 0.7
CCDC43-204ENST00000588687 A0A1W2PQH9 124 aa19.41■□□□□ 0.7
CCDC43-204ENST00000588687 GFRA2O00451 464 aa19.41■□□□□ 0.7
CCDC43-204ENST00000588687 PDXKO00764 312 aa19.41■□□□□ 0.7
CCDC43-204ENST00000588687 STC2O76061 302 aa19.41■□□□□ 0.7
CCDC43-204ENST00000588687 PENKP01210 267 aaPredicted RBP19.41■□□□□ 0.7
CCDC43-204ENST00000588687 HLA-DRAP01903 254 aa19.41■□□□□ 0.7
CCDC43-204ENST00000588687 KLKB1P03952 638 aa19.41■□□□□ 0.7
CCDC43-204ENST00000588687 SLFN14P0C7P3 912 aa19.41■□□□□ 0.7
CCDC43-204ENST00000588687 P4HA1P13674 534 aa19.41■□□□□ 0.7
CCDC43-204ENST00000588687 HOXB3P14651 431 aaPredicted RBP19.41■□□□□ 0.7
CCDC43-204ENST00000588687 DGKGP49619 791 aa19.41■□□□□ 0.7
CCDC43-204ENST00000588687 ENPP2Q13822 863 aa19.41■□□□□ 0.7
CCDC43-204ENST00000588687 FOXD4L5Q5VV16 416 aaPredicted RBP19.41■□□□□ 0.7
CCDC43-204ENST00000588687 FOXD4L4Q8WXT5 416 aaPredicted RBP19.41■□□□□ 0.7
CCDC43-204ENST00000588687 SERTAD1Q9UHV2 236 aa19.41■□□□□ 0.7
CCDC43-204ENST00000588687 NUDT5Q9UKK9 219 aa19.41■□□□□ 0.7
CCDC43-204ENST00000588687 WASH3PC4AMC7 463 aa19.4■□□□□ 0.7
CCDC43-204ENST00000588687 IKBKBO14920 756 aa19.4■□□□□ 0.7
CCDC43-204ENST00000588687 OPHN1O60890 802 aa19.4■□□□□ 0.7
CCDC43-204ENST00000588687 CLSTN1O94985 981 aa19.4■□□□□ 0.7
CCDC43-204ENST00000588687 F13A1P00488 732 aa19.4■□□□□ 0.7
CCDC43-204ENST00000588687 RARGP13631 454 aa19.4■□□□□ 0.7
CCDC43-204ENST00000588687 ACO1P21399 889 aaKnown RBP19.4■□□□□ 0.7
CCDC43-204ENST00000588687 PIK3CAP42336 1068 aa19.4■□□□□ 0.7
CCDC43-204ENST00000588687 ME1P48163 572 aa19.4■□□□□ 0.7
CCDC43-204ENST00000588687 KIF11P52732 1056 aa19.4■□□□□ 0.7
CCDC43-204ENST00000588687 FOXD4L6Q3SYB3 417 aaPredicted RBP19.4■□□□□ 0.7
CCDC43-204ENST00000588687 KMT5BQ4FZB7 885 aa19.4■□□□□ 0.7
CCDC43-204ENST00000588687 FYB2Q5VWT5 728 aa19.4■□□□□ 0.7
CCDC43-204ENST00000588687 FOXD4L3Q6VB84 417 aaPredicted RBP19.4■□□□□ 0.7
CCDC43-204ENST00000588687 CCDC186Q7Z3E2 898 aa19.4■□□□□ 0.7
CCDC43-204ENST00000588687 RAB44Q7Z6P3 723 aaPredicted RBP19.4■□□□□ 0.7
CCDC43-204ENST00000588687 HDDC3Q8N4P3 179 aa19.4■□□□□ 0.7
CCDC43-204ENST00000588687 ZNF276Q8N554 614 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms