RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 LINC01387J3KSC0 135 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 PDPK1O15530 556 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 PRPF4O43172 522 aaKnown RBP eCLIP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 CYP26A1O43174 497 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 DYRK3O43781 588 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 NDUFS2O75306 463 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 H6PDO95479 791 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 ANXA1P04083 346 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 MTHFD1P11586 935 aaKnown RBP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 ATF4P18848 351 aaPredicted RBP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 RPL21P46778 160 aaKnown RBP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 HSPA13P48723 471 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 MAPKAPK2P49137 400 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 HARS2P49590 506 aaKnown RBP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 ESRRGP62508 458 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 OCA2Q04671 838 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 CALCOCO2Q13137 446 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 TARDBPQ13148 414 aaKnown RBP eCLIP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 MTERF2Q49AM1 385 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 RILPL1Q5EBL4 403 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 FGD3Q5JSP0 725 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 AARS2Q5JTZ9 985 aaKnown RBP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 FCRLBQ6BAA4 426 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 IQSEC1Q6DN90 963 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 TRAF7Q6Q0C0 670 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 HERC6Q8IVU3 1022 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 NCOA7Q8NI08 942 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 GRPEL2Q8TAA5 225 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 CHAC2Q8WUX2 184 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 SYMPKQ92797 1274 aaKnown RBP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 MARC2Q969Z3 335 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 EAF2Q96CJ1 260 aaPredicted RBP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 NRBF2Q96F24 287 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 HEXIM2Q96MH2 286 aaKnown RBP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 ZSCAN5AQ9BUG6 496 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 C1orf50Q9BV19 199 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 DSCC1Q9BVC3 393 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 BTBD2Q9BX70 525 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 ZNF341Q9BYN7 854 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 EDEM3Q9BZQ6 932 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 DIABLOQ9NR28 239 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 CHST12Q9NRB3 414 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 FAM207AQ9NSI2 230 aaPredicted RBP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 RNF112Q9ULX5 631 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 CDC14AQ9UNH5 594 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 TMEM5Q9Y2B1 443 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 MTO1Q9Y2Z2 717 aaKnown RBP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 VWA7Q9Y334 891 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 CPDO75976 1380 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 H3BNH8 94 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 FOXN3O00409 490 aaPredicted RBP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 FCHO1O14526 889 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 ATP2A1O14983 1001 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 ASNA1O43681 348 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 CCNT2O60583 730 aaKnown RBP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 GH2P01242 217 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 RAG1P15918 1043 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 IL10P22301 178 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 DCKP27707 260 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 PRKAR1BP31321 381 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 PTGIRP43119 386 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 CPA2P48052 419 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 RACK1P63244 317 aaKnown RBP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 ZBTB16Q05516 673 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 TEFQ10587 303 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 CDC20Q12834 499 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 NFIAQ12857 509 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 MAPK7Q13164 816 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 SELPLGQ14242 412 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 PDK1Q15118 436 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 CDK10Q15131 360 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 DLGAP5Q15398 846 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 TAF5Q15542 800 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 TRIP13Q15645 432 aaPredicted RBP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 PGS1Q32NB8 556 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 GTF2IRD2BQ6EKJ0 949 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 TATDN1Q6P1N9 297 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 GALNT18Q6P9A2 607 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 GTF2IRD2Q86UP8 949 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 CLYBLQ8N0X4 340 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 OR5H6Q8NGV6 325 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 HM13Q8TCT9 377 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 SLC26A7Q8TE54 656 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 FAM149B1Q96BN6 582 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 SGK3Q96BR1 496 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 CEP95Q96GE4 821 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 NLRP4Q96MN2 994 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 RPRD1AQ96P16 312 aaPredicted RBP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 ZNF347Q96SE7 839 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 NOC4LQ9BVI4 516 aaKnown RBP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 FRMD8Q9BZ67 464 aaPredicted RBP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 BLZF1Q9H2G9 400 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 CDC42EP4Q9H3Q1 356 aaKnown RBP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 FBXO6Q9NRD1 293 aaPredicted RBP6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 ASNSD1Q9NWL6 643 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 MCM9Q9NXL9 1143 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 SLC39A1Q9NY26 324 aa6.69□□□□□ -1.34
AP000547.3-204ENST00000588548 DTLQ9NZJ0 730 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms