RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 GAB4Q2WGN9 574 aa16.82■□□□□ 0.28
RETREG3-206ENST00000588423 FBXO43Q4G163 708 aa16.82■□□□□ 0.28
RETREG3-206ENST00000588423 RHBDF2Q6PJF5 856 aa16.82■□□□□ 0.28
RETREG3-206ENST00000588423 Q6ZNB5 142 aa16.82■□□□□ 0.28
RETREG3-206ENST00000588423 APTXQ7Z2E3 356 aaKnown RBP16.82■□□□□ 0.28
RETREG3-206ENST00000588423 TMEM110Q86TL2 294 aa16.82■□□□□ 0.28
RETREG3-206ENST00000588423 MIB1Q86YT6 1006 aa16.82■□□□□ 0.28
RETREG3-206ENST00000588423 BBS7Q8IWZ6 715 aa16.82■□□□□ 0.28
RETREG3-206ENST00000588423 NDRG1Q92597 394 aaKnown RBP16.82■□□□□ 0.28
RETREG3-206ENST00000588423 WBP2Q969T9 261 aa16.82■□□□□ 0.28
RETREG3-206ENST00000588423 FAM122AQ96E09 287 aa16.82■□□□□ 0.28
RETREG3-206ENST00000588423 DCLK3Q9C098 648 aa16.82■□□□□ 0.28
RETREG3-206ENST00000588423 MARCH2Q9P0N8 246 aa16.82■□□□□ 0.28
RETREG3-206ENST00000588423 RASAL2Q9UJF2 1139 aa16.82■□□□□ 0.28
RETREG3-206ENST00000588423 SIK3Q9Y2K2 1263 aa16.82■□□□□ 0.28
RETREG3-206ENST00000588423 SYCE3A1L190 88 aa16.81■□□□□ 0.28
RETREG3-206ENST00000588423 F8VZ95 297 aa16.81■□□□□ 0.28
RETREG3-206ENST00000588423 HOXC11O43248 304 aaPredicted RBP16.81■□□□□ 0.28
RETREG3-206ENST00000588423 LTFP02788 710 aa16.81■□□□□ 0.28
RETREG3-206ENST00000588423 ADH5P11766 374 aa16.81■□□□□ 0.28
RETREG3-206ENST00000588423 KRT9P35527 623 aa16.81■□□□□ 0.28
RETREG3-206ENST00000588423 GAD2Q05329 585 aa16.81■□□□□ 0.28
RETREG3-206ENST00000588423 MTAPQ13126 283 aa16.81■□□□□ 0.28
RETREG3-206ENST00000588423 ZNF528Q3MIS6 628 aa16.81■□□□□ 0.28
RETREG3-206ENST00000588423 FSTL4Q6MZW2 842 aa16.81■□□□□ 0.28
RETREG3-206ENST00000588423 MSANTD2Q6P1R3 559 aa16.81■□□□□ 0.28
RETREG3-206ENST00000588423 BEND5Q7L4P6 421 aa16.81■□□□□ 0.28
RETREG3-206ENST00000588423 SLC47A2Q86VL8 602 aa16.81■□□□□ 0.28
RETREG3-206ENST00000588423 MAML2Q8IZL2 1156 aaPredicted RBP16.81■□□□□ 0.28
RETREG3-206ENST00000588423 SPEM1Q8N4L4 309 aa16.81■□□□□ 0.28
RETREG3-206ENST00000588423 RNF139Q8WU17 664 aa16.81■□□□□ 0.28
RETREG3-206ENST00000588423 GOLGA1Q92805 767 aa16.81■□□□□ 0.28
RETREG3-206ENST00000588423 PLD4Q96BZ4 506 aa16.81■□□□□ 0.28
RETREG3-206ENST00000588423 ERGIC2Q96RQ1 377 aa16.81■□□□□ 0.28
RETREG3-206ENST00000588423 PRMT8Q9NR22 394 aaPredicted RBP16.81■□□□□ 0.28
RETREG3-206ENST00000588423 SPHK2Q9NRA0 654 aa16.81■□□□□ 0.28
RETREG3-206ENST00000588423 CYTH4Q9UIA0 394 aa16.81■□□□□ 0.28
RETREG3-206ENST00000588423 SCAMP3O14828 347 aaKnown RBP16.8■□□□□ 0.28
RETREG3-206ENST00000588423 CAVIN2O95810 425 aa16.8■□□□□ 0.28
RETREG3-206ENST00000588423 PNMA6AP0CW24 399 aaPredicted RBP16.8■□□□□ 0.28
RETREG3-206ENST00000588423 CYP11B1P15538 503 aa16.8■□□□□ 0.28
RETREG3-206ENST00000588423 OPRD1P41143 372 aa16.8■□□□□ 0.28
RETREG3-206ENST00000588423 CCR3P51677 355 aa16.8■□□□□ 0.28
RETREG3-206ENST00000588423 UBXN1Q04323 297 aa16.8■□□□□ 0.28
RETREG3-206ENST00000588423 PDCLQ13371 301 aa16.8■□□□□ 0.28
RETREG3-206ENST00000588423 IQCB1Q15051 598 aa16.8■□□□□ 0.28
RETREG3-206ENST00000588423 LY6G5CQ5SRR4 150 aa16.8■□□□□ 0.28
RETREG3-206ENST00000588423 WDTC1Q8N5D0 677 aa16.8■□□□□ 0.28
RETREG3-206ENST00000588423 CCDC26Q8TAB7 109 aa16.8■□□□□ 0.28
RETREG3-206ENST00000588423 CLEC4CQ8WTT0 213 aa16.8■□□□□ 0.28
RETREG3-206ENST00000588423 ATOH1Q92858 354 aaPredicted RBP16.8■□□□□ 0.28
RETREG3-206ENST00000588423 TRIM62Q9BVG3 475 aa16.8■□□□□ 0.28
RETREG3-206ENST00000588423 FBRSL1Q9HCM7 1045 aaKnown RBP16.8■□□□□ 0.28
RETREG3-206ENST00000588423 ST7Q9NRC1 585 aa16.8■□□□□ 0.28
RETREG3-206ENST00000588423 RBM12Q9NTZ6 932 aaKnown RBP16.8■□□□□ 0.28
RETREG3-206ENST00000588423 HBS1LQ9Y450 684 aaKnown RBP16.8■□□□□ 0.28
RETREG3-206ENST00000588423 CEP83Q9Y592 693 aa16.8■□□□□ 0.28
RETREG3-206ENST00000588423 SLC12A8A0AV02 714 aa16.79■□□□□ 0.28
RETREG3-206ENST00000588423 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.79■□□□□ 0.28
RETREG3-206ENST00000588423 E5RJQ4 531 aa16.79■□□□□ 0.28
RETREG3-206ENST00000588423 PIK3R2O00459 728 aa16.79■□□□□ 0.28
RETREG3-206ENST00000588423 PAPSS2O95340 614 aaPredicted RBP16.79■□□□□ 0.28
RETREG3-206ENST00000588423 SP9P0CG40 484 aa16.79■□□□□ 0.28
RETREG3-206ENST00000588423 ATP1A3P13637 1013 aa16.79■□□□□ 0.28
RETREG3-206ENST00000588423 KLK7P49862 253 aa16.79■□□□□ 0.28
RETREG3-206ENST00000588423 JAM2P57087 298 aa16.79■□□□□ 0.28
RETREG3-206ENST00000588423 SNX16P57768 344 aa16.79■□□□□ 0.28
RETREG3-206ENST00000588423 GAS6Q14393 721 aa16.79■□□□□ 0.28
RETREG3-206ENST00000588423 PPP2R5DQ14738 602 aa16.79■□□□□ 0.28
RETREG3-206ENST00000588423 SYCP1Q15431 976 aa16.79■□□□□ 0.28
RETREG3-206ENST00000588423 TRIP4Q15650 581 aaPredicted RBP16.79■□□□□ 0.28
RETREG3-206ENST00000588423 SCUBE3Q8IX30 993 aa16.79■□□□□ 0.28
RETREG3-206ENST00000588423 EDEM1Q92611 657 aa16.79■□□□□ 0.28
RETREG3-206ENST00000588423 NOX5Q96PH1 765 aa16.79■□□□□ 0.28
RETREG3-206ENST00000588423 MIS12Q9H081 205 aa16.79■□□□□ 0.28
RETREG3-206ENST00000588423 FAM207AQ9NSI2 230 aaPredicted RBP16.79■□□□□ 0.28
RETREG3-206ENST00000588423 MARK1Q9P0L2 795 aa16.79■□□□□ 0.28
RETREG3-206ENST00000588423 A0A0A0MRY4 1105 aa16.78■□□□□ 0.28
RETREG3-206ENST00000588423 PAPSS1O43252 624 aaPredicted RBP16.78■□□□□ 0.28
RETREG3-206ENST00000588423 LATS1O95835 1130 aa16.78■□□□□ 0.28
RETREG3-206ENST00000588423 EGFP01133 1207 aa16.78■□□□□ 0.28
RETREG3-206ENST00000588423 KLKB1P03952 638 aa16.78■□□□□ 0.28
RETREG3-206ENST00000588423 CORO1AP31146 461 aaKnown RBP16.78■□□□□ 0.28
RETREG3-206ENST00000588423 CDH5P33151 784 aaPredicted RBP16.78■□□□□ 0.28
RETREG3-206ENST00000588423 CHKAP35790 457 aa16.78■□□□□ 0.28
RETREG3-206ENST00000588423 NBL1P41271 181 aa16.78■□□□□ 0.28
RETREG3-206ENST00000588423 POLR2FP61218 127 aaKnown RBP16.78■□□□□ 0.28
RETREG3-206ENST00000588423 PREPLQ4J6C6 727 aaPredicted RBP16.78■□□□□ 0.28
RETREG3-206ENST00000588423 NAIF1Q69YI7 327 aaPredicted RBP16.78■□□□□ 0.28
RETREG3-206ENST00000588423 Q6ZS52 159 aa16.78■□□□□ 0.28
RETREG3-206ENST00000588423 ZNF677Q86XU0 584 aa16.78■□□□□ 0.28
RETREG3-206ENST00000588423 FMNL3Q8IVF7 1028 aa16.78■□□□□ 0.28
RETREG3-206ENST00000588423 ETFBKMTQ8IXQ9 262 aa16.78■□□□□ 0.28
RETREG3-206ENST00000588423 NEK11Q8NG66 645 aa16.78■□□□□ 0.28
RETREG3-206ENST00000588423 DDX1Q92499 740 aaKnown RBP16.78■□□□□ 0.28
RETREG3-206ENST00000588423 PPP1R13BQ96KQ4 1090 aa16.78■□□□□ 0.28
RETREG3-206ENST00000588423 WDR35Q9P2L0 1181 aa16.78■□□□□ 0.28
RETREG3-206ENST00000588423 SFMBT1Q9UHJ3 866 aa16.78■□□□□ 0.28
RETREG3-206ENST00000588423 WDFY4Q6ZS81 3184 aa16.77■□□□□ 0.28
RETREG3-206ENST00000588423 CHURC1-FNTBB4DL54 471 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms