RNA–Protein interactions for RNA: ENST00000588289.1

TMED1-204, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2 BASIC

Gene TMED1, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-204ENST00000588289 CLEC4CQ8WTT0 213 aa13.21□□□□□ -0.29
TMED1-204ENST00000588289 RNF25Q96BH1 459 aaPredicted RBP13.21□□□□□ -0.29
TMED1-204ENST00000588289 NPY6RQ99463 290 aa13.21□□□□□ -0.29
TMED1-204ENST00000588289 RHOXF2Q9BQY4 288 aa13.21□□□□□ -0.29
TMED1-204ENST00000588289 C11orf84Q9BUA3 381 aaPredicted RBP13.21□□□□□ -0.29
TMED1-204ENST00000588289 AP1M1Q9BXS5 423 aa13.21□□□□□ -0.29
TMED1-204ENST00000588289 DDIT4Q9NX09 232 aa13.21□□□□□ -0.29
TMED1-204ENST00000588289 CLIC5Q9NZA1 410 aa13.21□□□□□ -0.29
TMED1-204ENST00000588289 MTCL1Q9Y4B5 1905 aaKnown RBP13.21□□□□□ -0.3
TMED1-204ENST00000588289 CLUHO75153 1309 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 CCDC151A5D8V7 595 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 YJEFN3A6XGL0 299 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 E7ENQ6 273 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 PDE2AO00408 941 aaPredicted RBP13.2□□□□□ -0.3
TMED1-204ENST00000588289 ECEL1O95672 775 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 EFEMP2O95967 443 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 C1RP00736 705 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 RARAP10276 462 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 CTSAP10619 480 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 ATF2P15336 505 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 IGFBP6P24592 240 aaPredicted RBP13.2□□□□□ -0.3
TMED1-204ENST00000588289 ACTN2P35609 894 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 NME3Q13232 169 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 NNTQ13423 1086 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 CUL1Q13616 776 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 RAB33AQ14088 237 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 PPP1R7Q15435 360 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 CCNG2Q16589 344 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 WDR93Q6P2C0 686 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 CCDC137Q6PK04 289 aaKnown RBP13.2□□□□□ -0.3
TMED1-204ENST00000588289 PRSS55Q6UWB4 352 aaPredicted RBP13.2□□□□□ -0.3
TMED1-204ENST00000588289 TMCO3Q6UWJ1 677 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 RNF19BQ6ZMZ0 732 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 CEP128Q6ZU80 1094 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 TMC7Q7Z402 723 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 EIF1ADQ8N9N8 165 aaKnown RBP13.2□□□□□ -0.3
TMED1-204ENST00000588289 BBOF1Q8ND07 529 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 SP7Q8TDD2 431 aaPredicted RBP13.2□□□□□ -0.3
TMED1-204ENST00000588289 NT5C3BQ969T7 300 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 NTAN1Q96AB6 310 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 VWCEQ96DN2 955 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 CCDC114Q96M63 670 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 EPAS1Q99814 870 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 NACA2Q9H009 215 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 ACBD3Q9H3P7 528 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 WDCPQ9H6R7 721 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 CYP4F11Q9HBI6 524 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 ENTPD7Q9NQZ7 604 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 FAM114A2Q9NRY5 505 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.2□□□□□ -0.3
TMED1-204ENST00000588289 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.2□□□□□ -0.3
TMED1-204ENST00000588289 PCYOX1Q9UHG3 505 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 AP4E1Q9UPM8 1137 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 ASB3Q9Y575 518 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 V9GYY5 206 aaPredicted RBP13.2□□□□□ -0.3
TMED1-204ENST00000588289 PLXNA4Q9HCM2 1894 aa13.2□□□□□ -0.3
TMED1-204ENST00000588289 WDR27A2RRH5 827 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 TNFRSF10BO14763 440 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 APOL1O14791 398 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 MCF2LO15068 1137 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 DAPK3O43293 454 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 ENDOD1O94919 500 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 HEXIM1O94992 359 aaKnown RBP13.19□□□□□ -0.3
TMED1-204ENST00000588289 FGF19O95750 216 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 APOEP02649 317 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 SYN1P17600 705 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 TGM2P21980 687 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 CCR1P32246 355 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 CDKN2BP42772 138 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 HDAC4P56524 1084 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 DUSP4Q13115 394 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 DPYSL2Q16555 572 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 CYP1B1Q16678 543 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 DDR2Q16832 855 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 SMTNL2Q2TAL5 461 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 PABPC1LQ4VXU2 614 aaKnown RBP13.19□□□□□ -0.3
TMED1-204ENST00000588289 KAZNQ674X7 775 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 CHRDL2Q6WN34 429 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 BBS12Q6ZW61 710 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 GSTA5Q7RTV2 222 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 TMEM173Q86WV6 379 aaPredicted RBP13.19□□□□□ -0.3
TMED1-204ENST00000588289 ATAD1Q8NBU5 361 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 ATL2Q8NHH9 583 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 P3H4Q92791 437 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 PIWIL1Q96J94 861 aaKnown RBP13.19□□□□□ -0.3
TMED1-204ENST00000588289 B3GALT6Q96L58 329 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 GCNAQ96QF7 691 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 TSPYL1Q9H0U9 437 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 SMOC2Q9H3U7 446 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 DHX35Q9H5Z1 703 aaKnown RBP13.19□□□□□ -0.3
TMED1-204ENST00000588289 LRRC19Q9H756 370 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 ARFGAP3Q9NP61 516 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 HCSTQ9UBK5 93 aa13.19□□□□□ -0.3
TMED1-204ENST00000588289 ZMYND8Q9ULU4 1186 aaPredicted RBP13.19□□□□□ -0.3
TMED1-204ENST00000588289 hCG_1818297A0A087WSY0 165 aa13.18□□□□□ -0.3
TMED1-204ENST00000588289 SYNJ2BP-COX16A0A087WUM0 186 aa13.18□□□□□ -0.3
TMED1-204ENST00000588289 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.18□□□□□ -0.3
TMED1-204ENST00000588289 CFAP69A5D8W1 941 aa13.18□□□□□ -0.3
TMED1-204ENST00000588289 PI4K2BG5E9Z4 385 aa13.18□□□□□ -0.3
TMED1-204ENST00000588289 APOC4-APOC2K7ER74 178 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms