RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 SYDE1Q6ZW31 735 aaPredicted RBP10.03□□□□□ -0.8
LINC01539-201ENST00000587904 POLNQ7Z5Q5 900 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 SERINC5Q86VE9 423 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 CPNE8Q86YQ8 564 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 JAMLQ86YT9 394 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 MAP7D3Q8IWC1 876 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 USP33Q8TEY7 942 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 HEXIM2Q96MH2 286 aaKnown RBP10.03□□□□□ -0.8
LINC01539-201ENST00000587904 SIKE1Q9BRV8 207 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 ERP44Q9BS26 406 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 CFHR5Q9BXR6 569 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 MRPL46Q9H2W6 279 aaKnown RBP10.03□□□□□ -0.8
LINC01539-201ENST00000587904 SYNCQ9H7C4 482 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 CHST12Q9NRB3 414 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 DDX56Q9NY93 547 aaKnown RBP10.03□□□□□ -0.8
LINC01539-201ENST00000587904 DKK3Q9UBP4 350 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 PARP2Q9UGN5 583 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 HMGXB4Q9UGU5 601 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 GABRQQ9UN88 632 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 NR2E1Q9Y466 385 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 FADS3Q9Y5Q0 445 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 NFS1Q9Y697 457 aa10.03□□□□□ -0.8
LINC01539-201ENST00000587904 ADAMTS4O75173 837 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 ECHS1P30084 290 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 PTPN7P35236 360 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 COILP38432 576 aaPredicted RBP10.02□□□□□ -0.81
LINC01539-201ENST00000587904 GPD2P43304 727 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 SNX16P57768 344 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 RAB15P59190 212 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 PRKCZQ05513 592 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 ACAP1Q15027 740 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 SIX1Q15475 284 aaPredicted RBP10.02□□□□□ -0.81
LINC01539-201ENST00000587904 SV2CQ496J9 727 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 LIN52Q52LA3 116 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 ODF2Q5BJF6 829 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 SPDYCQ5MJ68 293 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 FBXO47Q5MNV8 452 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 DUPD1Q68J44 220 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 AADACL2Q6P093 401 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 CCDC137Q6PK04 289 aaKnown RBP10.02□□□□□ -0.81
LINC01539-201ENST00000587904 ADAT2Q7Z6V5 191 aaKnown RBP10.02□□□□□ -0.81
LINC01539-201ENST00000587904 PHLDB2Q86SQ0 1253 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 RCOR2Q8IZ40 523 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 SCAIQ8N9R8 606 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 TRPC4APQ8TEL6 797 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 GRK7Q8WTQ7 553 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 ARHGAP39Q9C0H5 1083 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 XPNPEP3Q9NQH7 507 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 FAIMQ9NVQ4 179 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 GDAP2Q9NXN4 497 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 STOML1Q9UBI4 398 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 NKX1-2Q9UD57 310 aaPredicted RBP10.02□□□□□ -0.81
LINC01539-201ENST00000587904 ZNF180Q9UJW8 692 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 IPPQ9Y573 584 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 SNX9Q9Y5X1 595 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 TRIP12Q14669 1992 aaPredicted RBP10.02□□□□□ -0.81
LINC01539-201ENST00000587904 SMIM28A0A1B0GU29 152 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 KANSL1LA0AUZ9 987 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 PIRO00625 290 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 ATP5HO75947 161 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 ASMTLO95671 621 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 OAS1P00973 400 aaKnown RBP10.02□□□□□ -0.81
LINC01539-201ENST00000587904 KRT3P12035 628 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 PTGIRP43119 386 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 PTDSS1P48651 473 aaKnown RBP10.02□□□□□ -0.81
LINC01539-201ENST00000587904 RPL7AP62424 266 aaKnown RBP10.02□□□□□ -0.81
LINC01539-201ENST00000587904 CAMK2BQ13554 666 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 ITGA9Q13797 1035 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 TWF2Q6IBS0 349 aaKnown RBP10.02□□□□□ -0.81
LINC01539-201ENST00000587904 CYP4F22Q6NT55 531 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 SLC2A7Q6PXP3 512 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 XYLT1Q86Y38 959 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 ALDH16A1Q8IZ83 802 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 AGGF1Q8N302 714 aaeCLIP10.02□□□□□ -0.81
LINC01539-201ENST00000587904 GDAP1Q8TB36 358 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 UCMAQ8WVF2 138 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 ITPKCQ96DU7 683 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 MCRS1Q96EZ8 462 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 CPXM1Q96SM3 734 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 ZIC5Q96T25 663 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 EPB41L1Q9H4G0 881 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 PFDN4Q9NQP4 134 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 ABCF3Q9NUQ8 709 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 SLC38A7Q9NVC3 462 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 RABL2AQ9UBK7 228 aaPredicted RBP10.02□□□□□ -0.81
LINC01539-201ENST00000587904 CARD8Q9Y2G2 431 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 STK38LQ9Y2H1 464 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 HES2Q9Y543 173 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 CDY2AQ9Y6F7 541 aa10.02□□□□□ -0.81
LINC01539-201ENST00000587904 DAPK3O43293 454 aa10.01□□□□□ -0.81
LINC01539-201ENST00000587904 MGEA5O60502 916 aa10.01□□□□□ -0.81
LINC01539-201ENST00000587904 CABYRO75952 493 aa10.01□□□□□ -0.81
LINC01539-201ENST00000587904 PGK1P00558 417 aa10.01□□□□□ -0.81
LINC01539-201ENST00000587904 FAM153BP0C7A2 387 aa10.01□□□□□ -0.81
LINC01539-201ENST00000587904 AKAP5P24588 427 aa10.01□□□□□ -0.81
LINC01539-201ENST00000587904 HOXD10P28358 340 aa10.01□□□□□ -0.81
LINC01539-201ENST00000587904 LRPAP1P30533 357 aa10.01□□□□□ -0.81
LINC01539-201ENST00000587904 TAF6P49848 677 aa10.01□□□□□ -0.81
LINC01539-201ENST00000587904 TAS2R40P59535 323 aa10.01□□□□□ -0.81
LINC01539-201ENST00000587904 SP3Q02447 781 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms