RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 EXOC3O60645 756 aa5.12□□□□□ -1.59
VMP1-205ENST00000587470 CTNND1O60716 968 aaKnown RBP5.12□□□□□ -1.59
VMP1-205ENST00000587470 U2AF1L5P0DN76 240 aaPredicted RBP5.12□□□□□ -1.59
VMP1-205ENST00000587470 MYCLP12524 364 aaPredicted RBP5.12□□□□□ -1.59
VMP1-205ENST00000587470 EN2P19622 333 aaPredicted RBP5.12□□□□□ -1.59
VMP1-205ENST00000587470 U2AF1Q01081 240 aaKnown RBP eCLIP5.12□□□□□ -1.591e-15■■■□□ 17.4
VMP1-205ENST00000587470 KLF9Q13886 244 aaPredicted RBP5.12□□□□□ -1.59
VMP1-205ENST00000587470 SUPT20HL1Q3ZLR7 823 aa5.12□□□□□ -1.59
VMP1-205ENST00000587470 CERKLQ49MI3 558 aaPredicted RBP5.12□□□□□ -1.59
VMP1-205ENST00000587470 FCRL6Q6DN72 434 aa5.12□□□□□ -1.59
VMP1-205ENST00000587470 KIRREL2Q6UWL6 708 aa5.12□□□□□ -1.59
VMP1-205ENST00000587470 MPP5Q8N3R9 675 aa5.12□□□□□ -1.59
VMP1-205ENST00000587470 SIRT6Q8N6T7 355 aa5.12□□□□□ -1.59
VMP1-205ENST00000587470 C8orf58Q8NAV2 365 aa5.12□□□□□ -1.59
VMP1-205ENST00000587470 IL31RAQ8NI17 732 aa5.12□□□□□ -1.59
VMP1-205ENST00000587470 DENND1AQ8TEH3 1009 aa5.12□□□□□ -1.59
VMP1-205ENST00000587470 RAPGEF4Q8WZA2 1011 aa5.12□□□□□ -1.59
VMP1-205ENST00000587470 SUCLG2Q96I99 432 aa5.12□□□□□ -1.59
VMP1-205ENST00000587470 RITA1Q96K30 269 aa5.12□□□□□ -1.59
VMP1-205ENST00000587470 C5orf34Q96MH7 638 aa5.12□□□□□ -1.59
VMP1-205ENST00000587470 C17orf80Q9BSJ5 609 aa5.12□□□□□ -1.59
VMP1-205ENST00000587470 PRSS22Q9GZN4 317 aa5.12□□□□□ -1.59
VMP1-205ENST00000587470 SMURF2Q9HAU4 748 aa5.12□□□□□ -1.59
VMP1-205ENST00000587470 ATP6V0A4Q9HBG4 840 aa5.12□□□□□ -1.59
VMP1-205ENST00000587470 A1CFQ9NQ94 594 aaKnown RBP5.12□□□□□ -1.59
VMP1-205ENST00000587470 XPNPEP3Q9NQH7 507 aa5.12□□□□□ -1.59
VMP1-205ENST00000587470 MAP3K5Q99683 1374 aa5.12□□□□□ -1.59
VMP1-205ENST00000587470 PXDNQ92626 1479 aa5.12□□□□□ -1.59
VMP1-205ENST00000587470 TRPM1Q7Z4N2 1603 aa5.12□□□□□ -1.59
VMP1-205ENST00000587470 USP32Q8NFA0 1604 aa5.12□□□□□ -1.59
VMP1-205ENST00000587470 KNDC1Q76NI1 1749 aa5.11□□□□□ -1.59
VMP1-205ENST00000587470 CYP2D7A0A087X1C5 515 aa5.11□□□□□ -1.59
VMP1-205ENST00000587470 UBE2Q2LH0YL09 131 aa5.11□□□□□ -1.59
VMP1-205ENST00000587470 AP4M1O00189 453 aa5.11□□□□□ -1.59
VMP1-205ENST00000587470 PSMD9O00233 223 aa5.11□□□□□ -1.59
VMP1-205ENST00000587470 MOSPD3O75425 235 aa5.11□□□□□ -1.59
VMP1-205ENST00000587470 CHRM5P08912 532 aaPredicted RBP5.11□□□□□ -1.59
VMP1-205ENST00000587470 E2F1Q01094 437 aa5.11□□□□□ -1.59
VMP1-205ENST00000587470 ETFDHQ16134 617 aa5.11□□□□□ -1.59
VMP1-205ENST00000587470 CYP1B1Q16678 543 aa5.11□□□□□ -1.59
VMP1-205ENST00000587470 CERCAMQ5T4B2 595 aa5.11□□□□□ -1.59
VMP1-205ENST00000587470 MAEAQ7L5Y9 396 aa5.11□□□□□ -1.59
VMP1-205ENST00000587470 OVCH2Q7RTZ1 564 aa5.11□□□□□ -1.59
VMP1-205ENST00000587470 RAB11FIP4Q86YS3 637 aa5.11□□□□□ -1.59
VMP1-205ENST00000587470 SPARTQ8N0X7 666 aa5.11□□□□□ -1.59
VMP1-205ENST00000587470 TESK2Q96S53 571 aa5.11□□□□□ -1.59
VMP1-205ENST00000587470 CIPCQ9C0C6 399 aa5.11□□□□□ -1.59
VMP1-205ENST00000587470 ZNF518BQ9C0D4 1074 aa5.11□□□□□ -1.59
VMP1-205ENST00000587470 TMEM60Q9H2L4 133 aa5.11□□□□□ -1.59
VMP1-205ENST00000587470 GBA2Q9HCG7 927 aaPredicted RBP5.11□□□□□ -1.59
VMP1-205ENST00000587470 SPATA31A5Q5VU36 1347 aa5.11□□□□□ -1.59
VMP1-205ENST00000587470 SPATA31A7Q8IWB4 1347 aa5.11□□□□□ -1.59
VMP1-205ENST00000587470 ROCK2O75116 1388 aaKnown RBP5.11□□□□□ -1.59
VMP1-205ENST00000587470 ATP10DQ9P241 1426 aa5.11□□□□□ -1.59
VMP1-205ENST00000587470 NALCNQ8IZF0 1738 aa5.11□□□□□ -1.59
VMP1-205ENST00000587470 SMIM35A0A1B0GVV1 85 aa5.1□□□□□ -1.59
VMP1-205ENST00000587470 TMEM233B4DJY2 109 aa5.1□□□□□ -1.59
VMP1-205ENST00000587470 VNN1O95497 513 aa5.1□□□□□ -1.59
VMP1-205ENST00000587470 ITGB6P18564 788 aa5.1□□□□□ -1.59
VMP1-205ENST00000587470 SLC7A1P30825 629 aa5.1□□□□□ -1.59
VMP1-205ENST00000587470 PRKAR1BP31321 381 aa5.1□□□□□ -1.59
VMP1-205ENST00000587470 RENBPP51606 427 aa5.1□□□□□ -1.59
VMP1-205ENST00000587470 CCNIQ14094 377 aa5.1□□□□□ -1.59
VMP1-205ENST00000587470 DAZAP2Q15038 168 aaPredicted RBP5.1□□□□□ -1.59
VMP1-205ENST00000587470 PLCH1Q4KWH8 1693 aa5.1□□□□□ -1.59
VMP1-205ENST00000587470 CXorf57Q6NSI4 855 aaKnown RBP5.1□□□□□ -1.59
VMP1-205ENST00000587470 MIS18BP1Q6P0N0 1132 aa5.1□□□□□ -1.59
VMP1-205ENST00000587470 SERPINA13PQ6UXR4 307 aa5.1□□□□□ -1.59
VMP1-205ENST00000587470 CASZ1Q86V15 1759 aa5.1□□□□□ -1.59
VMP1-205ENST00000587470 SFTPA1Q8IWL2 248 aa5.1□□□□□ -1.59
VMP1-205ENST00000587470 ZNF366Q8N895 744 aa5.1□□□□□ -1.59
VMP1-205ENST00000587470 TMEM171Q8WVE6 324 aa5.1□□□□□ -1.59
VMP1-205ENST00000587470 PRR25Q96S07 402 aa5.1□□□□□ -1.59
VMP1-205ENST00000587470 CDK19Q9BWU1 502 aa5.1□□□□□ -1.59
VMP1-205ENST00000587470 B3GNT5Q9BYG0 378 aa5.1□□□□□ -1.59
VMP1-205ENST00000587470 CENPJQ9HC77 1338 aaPredicted RBP5.1□□□□□ -1.59
VMP1-205ENST00000587470 AMFRQ9UKV5 643 aa5.1□□□□□ -1.59
VMP1-205ENST00000587470 TBC1D30Q9Y2I9 924 aa5.1□□□□□ -1.59
VMP1-205ENST00000587470 WDR17Q8IZU2 1322 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 ZNF521Q96K83 1311 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 TCRBV5S1A1TA0A578 114 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 CAPN8A6NHC0 703 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 USP1O94782 785 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 FGAP02671 866 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 MYBP10242 640 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 CYP2A6P11509 494 aaPredicted RBP5.09□□□□□ -1.59
VMP1-205ENST00000587470 SFPQP23246 707 aaKnown RBP eCLIP5.09□□□□□ -1.59
VMP1-205ENST00000587470 FPR3P25089 353 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 GKP32189 559 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 MMP13P45452 471 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 BCAT1P54687 386 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 MLC1Q15049 377 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 INSCQ1MX18 579 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 PTCHD3Q3KNS1 767 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 RNASE12Q5GAN4 147 aaKnown RBP5.09□□□□□ -1.59
VMP1-205ENST00000587470 DCAF12L1Q5VU92 463 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 SLC2A7Q6PXP3 512 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 KRT28Q7Z3Y7 464 aa5.09□□□□□ -1.59
VMP1-205ENST00000587470 COL23A1Q86Y22 540 aaPredicted RBP5.09□□□□□ -1.59
VMP1-205ENST00000587470 KIAA0319LQ8IZA0 1049 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms