RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 L1CAMP32004 1257 aa20.66■□□□□ 0.9
TRIM47-204ENST00000587339 RTP2Q5QGT7 225 aa20.66■□□□□ 0.9
TRIM47-204ENST00000587339 BSPRYQ5W0U4 402 aa20.66■□□□□ 0.9
TRIM47-204ENST00000587339 ZDHHC24Q6UX98 284 aa20.66■□□□□ 0.9
TRIM47-204ENST00000587339 EDEM1Q92611 657 aa20.66■□□□□ 0.9
TRIM47-204ENST00000587339 TOP1MTQ969P6 601 aa20.66■□□□□ 0.9
TRIM47-204ENST00000587339 TRIM43Q96BQ3 446 aaPredicted RBP20.66■□□□□ 0.9
TRIM47-204ENST00000587339 LRRC45Q96CN5 670 aa20.66■□□□□ 0.9
TRIM47-204ENST00000587339 PGLYRP2Q96PD5 576 aa20.66■□□□□ 0.9
TRIM47-204ENST00000587339 PIGVQ9NUD9 493 aa20.66■□□□□ 0.9
TRIM47-204ENST00000587339 RRN3Q9NYV6 651 aa20.66■□□□□ 0.9
TRIM47-204ENST00000587339 PTPRDP23468 1912 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 ZNF487B1APH4 448 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 TNFRSF10BO14763 440 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 KRT14P02533 472 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 CPB1P15086 417 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 ATF2P15336 505 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 ADCY8P40145 1251 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 CTCFP49711 727 aaPredicted RBP20.65■□□□□ 0.9
TRIM47-204ENST00000587339 IFRD2Q12894 506 aaPredicted RBP20.65■□□□□ 0.9
TRIM47-204ENST00000587339 ANKS3Q6ZW76 656 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 PSTKQ8IV42 348 aaKnown RBP20.65■□□□□ 0.9
TRIM47-204ENST00000587339 ALLCQ8N6M5 410 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 ADAM32Q8TC27 787 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 BCL7CQ8WUZ0 217 aaPredicted RBP20.65■□□□□ 0.9
TRIM47-204ENST00000587339 P3H4Q92791 437 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 SNF8Q96H20 258 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 TMEM121Q9BTD3 319 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 TTPALQ9BTX7 342 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 TRIM62Q9BVG3 475 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 FAM129AQ9BZQ8 928 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 WHRNQ9P202 907 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 FZD10Q9ULW2 581 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 VWA8A3KMH1 1905 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 H7C4K7 107 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 TRIM66O15016 1216 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 AMHP03971 560 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 PECAM1P16284 738 aaPredicted RBP20.65■□□□□ 0.9
TRIM47-204ENST00000587339 ITIH2P19823 946 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 HSPA9P38646 679 aaKnown RBP20.65■□□□□ 0.9
TRIM47-204ENST00000587339 VPS41P49754 854 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 ARPP19P56211 112 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 CCHCR1Q8TD31 782 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 ART4Q93070 314 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 ZBTB9Q96C00 473 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 CWH43Q9H720 699 aa20.65■□□□□ 0.9
TRIM47-204ENST00000587339 MTRF1LQ9UGC7 380 aaKnown RBP20.65■□□□□ 0.9
TRIM47-204ENST00000587339 GOLGA6BA6NDN3 693 aa20.64■□□□□ 0.89
TRIM47-204ENST00000587339 SGK1O00141 431 aa20.64■□□□□ 0.89
TRIM47-204ENST00000587339 APOL1O14791 398 aa20.64■□□□□ 0.89
TRIM47-204ENST00000587339 KIAA0355O15063 1070 aa20.64■□□□□ 0.89
TRIM47-204ENST00000587339 MCF2LO15068 1137 aa20.64■□□□□ 0.89
TRIM47-204ENST00000587339 IVDP26440 423 aa20.64■□□□□ 0.89
TRIM47-204ENST00000587339 KLRC2P26717 231 aa20.64■□□□□ 0.89
TRIM47-204ENST00000587339 PCDH19Q8TAB3 1148 aa20.64■□□□□ 0.89
TRIM47-204ENST00000587339 FAF2Q96CS3 445 aa20.64■□□□□ 0.89
TRIM47-204ENST00000587339 PGAP3Q96FM1 320 aaPredicted RBP20.64■□□□□ 0.89
TRIM47-204ENST00000587339 SLC9A7Q96T83 725 aa20.64■□□□□ 0.89
TRIM47-204ENST00000587339 DDIT4Q9NX09 232 aa20.64■□□□□ 0.89
TRIM47-204ENST00000587339 MTMR10Q9NXD2 777 aa20.64■□□□□ 0.89
TRIM47-204ENST00000587339 KIAA0100Q14667 2235 aaKnown RBP20.64■□□□□ 0.89
TRIM47-204ENST00000587339 F9P00740 461 aa20.63■□□□□ 0.89
TRIM47-204ENST00000587339 MAGEA11P43364 429 aa20.63■□□□□ 0.89
TRIM47-204ENST00000587339 EIF3EP60228 445 aaKnown RBP20.63■□□□□ 0.89
TRIM47-204ENST00000587339 DDR2Q16832 855 aa20.63■□□□□ 0.89
TRIM47-204ENST00000587339 SLC9A4Q6AI14 798 aa20.63■□□□□ 0.89
TRIM47-204ENST00000587339 MFSD5Q6N075 450 aa20.63■□□□□ 0.89
TRIM47-204ENST00000587339 TAS1R1Q7RTX1 841 aa20.63■□□□□ 0.89
TRIM47-204ENST00000587339 TMC3Q7Z5M5 1100 aa20.63■□□□□ 0.89
TRIM47-204ENST00000587339 TMEM199Q8N511 208 aa20.63■□□□□ 0.89
TRIM47-204ENST00000587339 PQLC3Q8N755 202 aa20.63■□□□□ 0.89
TRIM47-204ENST00000587339 ATAD1Q8NBU5 361 aa20.63■□□□□ 0.89
TRIM47-204ENST00000587339 C8orf48Q96LL4 319 aa20.63■□□□□ 0.89
TRIM47-204ENST00000587339 KCTD15Q96SI1 283 aaPredicted RBP20.63■□□□□ 0.89
TRIM47-204ENST00000587339 OXCT2Q9BYC2 517 aaPredicted RBP20.63■□□□□ 0.89
TRIM47-204ENST00000587339 MAGEB5Q9BZ81 275 aa20.63■□□□□ 0.89
TRIM47-204ENST00000587339 HSPA1AP0DMV8 641 aaKnown RBP20.63■□□□□ 0.89
TRIM47-204ENST00000587339 HSPA1BP0DMV9 641 aaKnown RBP20.63■□□□□ 0.89
TRIM47-204ENST00000587339 CAPN2P17655 700 aa20.63■□□□□ 0.89
TRIM47-204ENST00000587339 TGM2P21980 687 aa20.63■□□□□ 0.89
TRIM47-204ENST00000587339 YWHAGP61981 247 aaKnown RBP eCLIP20.63■□□□□ 0.89
TRIM47-204ENST00000587339 DHX9Q08211 1270 aaKnown RBP20.63■□□□□ 0.89
TRIM47-204ENST00000587339 GPR17Q13304 367 aa20.63■□□□□ 0.89
TRIM47-204ENST00000587339 SPOUT1Q5T280 376 aaKnown RBP20.63■□□□□ 0.89
TRIM47-204ENST00000587339 ALS2CLQ60I27 953 aa20.63■□□□□ 0.89
TRIM47-204ENST00000587339 FAM117BQ6P1L5 589 aa20.63■□□□□ 0.89
TRIM47-204ENST00000587339 BEND5Q7L4P6 421 aa20.63■□□□□ 0.89
TRIM47-204ENST00000587339 PLD5Q8N7P1 536 aa20.63■□□□□ 0.89
TRIM47-204ENST00000587339 FAM204AQ9H8W3 233 aa20.63■□□□□ 0.89
TRIM47-204ENST00000587339 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.63■□□□□ 0.891e-6■■□□□ 13
TRIM47-204ENST00000587339 TBC1D4O60343 1298 aa20.62■□□□□ 0.89
TRIM47-204ENST00000587339 EFCAB14O75071 495 aa20.62■□□□□ 0.89
TRIM47-204ENST00000587339 RBP3P10745 1247 aa20.62■□□□□ 0.89
TRIM47-204ENST00000587339 ARL4AP40617 200 aa20.62■□□□□ 0.89
TRIM47-204ENST00000587339 AIF1P55008 147 aa20.62■□□□□ 0.89
TRIM47-204ENST00000587339 FAM193AP78312 1265 aa20.62■□□□□ 0.89
TRIM47-204ENST00000587339 DEFB103AP81534 67 aa20.62■□□□□ 0.89
TRIM47-204ENST00000587339 SMARCB1Q12824 385 aa20.62■□□□□ 0.89
TRIM47-204ENST00000587339 NOMO1Q15155 1222 aa20.62■□□□□ 0.89
TRIM47-204ENST00000587339 HSP90B2PQ58FF3 399 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms