RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 LMBRD1Q9NUN5 540 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 TMEM30AQ9NV96 361 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 WSB2Q9NYS7 404 aaPredicted RBP9.07□□□□□ -0.96
SDF2-204ENST00000587338 EXOC7Q9UPT5 735 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 NFE2L3Q9Y4A8 694 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 PCDHGB2Q9Y5G2 931 aa9.07□□□□□ -0.96
SDF2-204ENST00000587338 CYSRT1A8MQ03 144 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 PLK4O00444 970 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 CLDN5O00501 218 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 SLC26A4O43511 780 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 TNFSF14O43557 240 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 CACNG3O60359 315 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 GADD45BO75293 160 aaPredicted RBP9.06□□□□□ -0.96
SDF2-204ENST00000587338 TNNC2P02585 160 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 ME1P48163 572 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 DGKGP49619 791 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 CSNK1EP49674 416 aaKnown RBP9.06□□□□□ -0.96
SDF2-204ENST00000587338 SUZ12Q15022 739 aaKnown RBP9.06□□□□□ -0.96
SDF2-204ENST00000587338 FUT11Q495W5 492 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 L1TD1Q5T7N2 865 aaKnown RBP9.06□□□□□ -0.96
SDF2-204ENST00000587338 DHRS13Q6UX07 377 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 LRRC69Q6ZNQ3 347 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 TPGS1Q6ZTW0 290 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 DYMQ7RTS9 669 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 LIMS2Q7Z4I7 341 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 NUP93Q8N1F7 819 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 ZNF843Q8N446 348 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 CADM4Q8NFZ8 388 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 OR5B17Q8NGF7 314 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 OR6B3Q8NGW1 331 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 LARP4BQ92615 738 aaKnown RBP9.06□□□□□ -0.96
SDF2-204ENST00000587338 BHMTQ93088 406 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 NXPE2Q96DL1 559 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 AK8Q96MA6 479 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 FCRL3Q96P31 734 aaPredicted RBP9.06□□□□□ -0.96
SDF2-204ENST00000587338 ACCSQ96QU6 501 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 MRPL45Q9BRJ2 306 aaKnown RBP9.06□□□□□ -0.96
SDF2-204ENST00000587338 CBWD1Q9BRT8 395 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 ELOVL4Q9GZR5 314 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 DPEP3Q9H4B8 488 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 PCIF1Q9H4Z3 704 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 MRPL44Q9H9J2 332 aaKnown RBP9.06□□□□□ -0.96
SDF2-204ENST00000587338 TBC1D7Q9P0N9 293 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 USP36Q9P275 1121 aaKnown RBP9.06□□□□□ -0.96
SDF2-204ENST00000587338 CHORDC1Q9UHD1 332 aaPredicted RBP9.06□□□□□ -0.96
SDF2-204ENST00000587338 EIF2B4Q9UI10 523 aaKnown RBP9.06□□□□□ -0.96
SDF2-204ENST00000587338 RAI2Q9Y5P3 530 aa9.06□□□□□ -0.96
SDF2-204ENST00000587338 PTPRJQ12913 1337 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 METTL12A8MUP2 240 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 KCNJ18B7U540 433 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 GFRA2O00451 464 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 SPTLC2O15270 562 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 PPP1R37O75864 691 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 RTN3O95197 1032 aaPredicted RBP9.05□□□□□ -0.96
SDF2-204ENST00000587338 GCNT3O95395 438 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 YEATS4O95619 227 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 LDHAP00338 332 aaKnown RBP9.05□□□□□ -0.96
SDF2-204ENST00000587338 PTPN1P18031 435 aaKnown RBP9.05□□□□□ -0.96
SDF2-204ENST00000587338 GARTP22102 1010 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 GNL1P36915 607 aaPredicted RBP9.05□□□□□ -0.96
SDF2-204ENST00000587338 GRK6P43250 576 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 TPMTP51580 245 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 AFF3P51826 1226 aaKnown RBP9.05□□□□□ -0.96
SDF2-204ENST00000587338 SEMG2Q02383 582 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 SMAD1Q15797 465 aaKnown RBP9.05□□□□□ -0.96
SDF2-204ENST00000587338 SKOR2Q2VWA4 1001 aaPredicted RBP9.05□□□□□ -0.96
SDF2-204ENST00000587338 FAM124AQ86V42 546 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 SYCP3Q8IZU3 236 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 ENGASEQ8NFI3 743 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 SCAMP5Q8TAC9 235 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 OVCA2Q8WZ82 227 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 DUSP9Q99956 384 aaKnown RBP9.05□□□□□ -0.96
SDF2-204ENST00000587338 MKRN2Q9H000 416 aaKnown RBP9.05□□□□□ -0.96
SDF2-204ENST00000587338 PRORYQ9H606 182 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 ITM2CQ9NQX7 267 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 INTS13Q9NVM9 706 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 GMIPQ9P107 970 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 WDR35Q9P2L0 1181 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 RCOR1Q9UKL0 485 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 NME7Q9Y5B8 376 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 STON1Q9Y6Q2 735 aa9.05□□□□□ -0.96
SDF2-204ENST00000587338 E9PAM4 449 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 J3QKU1 62 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 CAPN9O14815 690 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 RRP8O43159 456 aaKnown RBP9.04□□□□□ -0.96
SDF2-204ENST00000587338 PRPF6O94906 941 aaKnown RBP9.04□□□□□ -0.96
SDF2-204ENST00000587338 MBD3O95983 291 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 ACADMP11310 421 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 OXTRP30559 389 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 EIF2S3P41091 472 aaKnown RBP9.04□□□□□ -0.96
SDF2-204ENST00000587338 NASPP49321 788 aaPredicted RBP9.04□□□□□ -0.96
SDF2-204ENST00000587338 TUBP50607 506 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 CCT8P50990 548 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 CASP5P51878 434 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 SLC5A3P53794 718 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 CLDN6P56747 220 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 UBE2HP62256 183 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 TNNC1P63316 161 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 IL9RQ01113 521 aa9.04□□□□□ -0.96
SDF2-204ENST00000587338 PTPRNQ16849 979 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms