RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 KIAA1211LQ6NV74 962 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 SYT10Q6XYQ8 523 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 ITIH5Q86UX2 942 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 TTC30AQ86WT1 665 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 EFCAB13Q8IY85 973 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 RNF10Q8N5U6 811 aaKnown RBP8.28□□□□□ -1.08
VMP1-204ENST00000587259 FRMD1Q8N878 549 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 FBXL13Q8NEE6 735 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 TRIM58Q8NG06 486 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 JAKMIP2Q96AA8 810 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 MSANTD3Q96H12 275 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 GCNAQ96QF7 691 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 CHP1Q99653 195 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 CRACR2AQ9BSW2 395 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 EDEM2Q9BV94 578 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 STK33Q9BYT3 514 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 INTS2Q9H0H0 1204 aaKnown RBP8.28□□□□□ -1.08
VMP1-204ENST00000587259 LINC00597Q9H2U6 94 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 ZDHHC4Q9NPG8 344 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 LZTFL1Q9NQ48 299 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 OBP2AQ9NY56 170 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 ARHGAP20Q9P2F6 1191 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 CPSF3Q9UKF6 684 aaKnown RBP8.28□□□□□ -1.08
VMP1-204ENST00000587259 AGO2Q9UKV8 859 aaKnown RBP8.28□□□□□ -1.08
VMP1-204ENST00000587259 INTUQ9ULD6 942 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 COQ4Q9Y3A0 265 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 ASB3Q9Y575 518 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 ASPMQ8IZT6 3477 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 AKAP13Q12802 2813 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 ZFYVE26Q68DK2 2539 aa8.28□□□□□ -1.08
VMP1-204ENST00000587259 SPAG17Q6Q759 2223 aa8.27□□□□□ -1.08
VMP1-204ENST00000587259 UQCRHLA0A096LP55 91 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 C2orf78A6NCI8 922 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 F8VZ95 297 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 RNF225M0QZC1 329 aaPredicted RBP8.27□□□□□ -1.09
VMP1-204ENST00000587259 TRDMT1O14717 391 aaKnown RBP8.27□□□□□ -1.09
VMP1-204ENST00000587259 EPHB6O15197 1021 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 SLU7O95391 586 aaKnown RBP8.27□□□□□ -1.09
VMP1-204ENST00000587259 CYP11A1P05108 521 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 ADRB2P07550 413 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 UQCRHP07919 91 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 SLC9A1P19634 815 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 CYP2F1P24903 491 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 CDC25CP30307 473 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 GBP1P32455 592 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 GJA4P35212 333 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 SOX5P35711 763 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 AVPR1AP37288 418 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 EIF4A3P38919 411 aaKnown RBP8.27□□□□□ -1.09
VMP1-204ENST00000587259 NOVA1P51513 510 aaKnown RBP8.27□□□□□ -1.09
VMP1-204ENST00000587259 DGKEP52429 567 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 LIMK1P53667 647 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 MFAP3P55082 362 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 CLDN10P78369 228 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 COL9A2Q14055 689 aaPredicted RBP8.27□□□□□ -1.09
VMP1-204ENST00000587259 DMC1Q14565 340 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 SH3PXD2AQ5TCZ1 1133 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 PPP1R2P3Q6NXS1 205 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 LAPTM4BQ86VI4 370 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 ACRBPQ8NEB7 543 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 PARD3BQ8TEW8 1205 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 ERLEC1Q96DZ1 483 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 NT5C1BQ96P26 610 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 NAPGQ99747 312 aaPredicted RBP8.27□□□□□ -1.09
VMP1-204ENST00000587259 P2RY13Q9BPV8 354 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 IMPG2Q9BZV3 1241 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 PCIF1Q9H4Z3 704 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 L2HGDHQ9H9P8 463 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 FSCN3Q9NQT6 498 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 TDP1Q9NUW8 608 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 THG1LQ9NWX6 298 aaKnown RBP8.27□□□□□ -1.09
VMP1-204ENST00000587259 DPP3Q9NY33 737 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 ZMIZ1Q9ULJ6 1067 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 FHOD1Q9Y613 1164 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 ABCA7Q8IZY2 2146 aa8.27□□□□□ -1.09
VMP1-204ENST00000587259 LNP1A1A4G5 178 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 BTNL10A8MVZ5 291 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 PJA2O43164 708 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 TACC1O75410 805 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 FGF19O95750 216 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 TRIM49P0CI25 452 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 TRIM49CP0CI26 452 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 HNRNPLP14866 589 aaKnown RBP eCLIP8.26□□□□□ -1.09
VMP1-204ENST00000587259 TBXAS1P24557 533 aaPredicted RBP8.26□□□□□ -1.09
VMP1-204ENST00000587259 ADSSP30520 456 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 MAGEA1P43355 309 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 TUFMP49411 452 aaKnown RBP8.26□□□□□ -1.09
VMP1-204ENST00000587259 TAF6P49848 677 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 SHC2P98077 582 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 ZXDBP98169 803 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 GCNT1Q02742 428 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 ZNF252P-AS1Q0IIN9 211 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 UAP1L1Q3KQV9 507 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 CBWD6Q4V339 395 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 C2orf27AQ580R0 203 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 CBWD3Q5JTY5 395 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 CBWD5Q5RIA9 395 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 HGSNATQ68CP4 663 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 C1orf228Q6PIY5 440 aa8.26□□□□□ -1.09
VMP1-204ENST00000587259 CRELD2Q6UXH1 353 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms