RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 VPS9D1Q9Y2B5 631 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 FARP2O94887 1054 aaPredicted RBP10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 LUC7L3O95232 432 aaKnown RBP10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 MIPP30301 263 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 PEX19P40855 299 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 CHI3L2Q15782 390 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 LRIG3Q6UXM1 1119 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 SH3RF1Q7Z6J0 888 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 MDM1Q8TC05 714 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 ACO2Q99798 780 aaKnown RBP10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 TKTL2Q9H0I9 626 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 ECT2Q9H8V3 914 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 SPASTQ9UBP0 616 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 F8VP50 259 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 VPS26AO75436 327 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 HMGCRP04035 888 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 PYGBP11216 843 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 CTNNB1P35222 781 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 AMPD2Q01433 879 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 BTKQ06187 659 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 ITGA7Q13683 1181 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 STARD3Q14849 445 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 ACBD5Q5T8D3 534 aaPredicted RBP10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 SPRYD7Q5W111 196 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 LAYNQ6UX15 382 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 RD3Q7Z3Z2 195 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 E2F7Q96AV8 911 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 ROPN1BQ9BZX4 212 aaPredicted RBP10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 PABPC3Q9H361 631 aaKnown RBP10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 ROPN1Q9HAT0 212 aaPredicted RBP10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 CYP4F12Q9HCS2 524 aa10.03□□□□□ -0.8
GPATCH8-205ENST00000587228 CCDC85CA6NKD9 419 aa10.02□□□□□ -0.8
GPATCH8-205ENST00000587228 NFKBIEO00221 500 aa10.02□□□□□ -0.8
GPATCH8-205ENST00000587228 SOAT2O75908 522 aa10.02□□□□□ -0.8
GPATCH8-205ENST00000587228 SEC24CP53992 1094 aa10.02□□□□□ -0.8
GPATCH8-205ENST00000587228 DNAJC3Q13217 504 aa10.02□□□□□ -0.8
GPATCH8-205ENST00000587228 CCNG2Q16589 344 aa10.02□□□□□ -0.8
GPATCH8-205ENST00000587228 C15orf59Q2T9L4 293 aaPredicted RBP10.02□□□□□ -0.8
GPATCH8-205ENST00000587228 HSP90AA5PQ58FG0 334 aa10.02□□□□□ -0.8
GPATCH8-205ENST00000587228 OOSP2Q86WS3 158 aa10.02□□□□□ -0.8
GPATCH8-205ENST00000587228 ARID3BQ8IVW6 561 aaPredicted RBP10.02□□□□□ -0.8
GPATCH8-205ENST00000587228 TMEM86AQ8N2M4 240 aa10.02□□□□□ -0.8
GPATCH8-205ENST00000587228 TRIML2Q8N7C3 387 aa10.02□□□□□ -0.8
GPATCH8-205ENST00000587228 KCNV2Q8TDN2 545 aa10.02□□□□□ -0.8
GPATCH8-205ENST00000587228 XPO6Q96QU8 1125 aaKnown RBP10.02□□□□□ -0.8
GPATCH8-205ENST00000587228 UNKQ9C0B0 810 aaKnown RBP10.02□□□□□ -0.8
GPATCH8-205ENST00000587228 IKZF4Q9H2S9 585 aa10.02□□□□□ -0.8
GPATCH8-205ENST00000587228 MRPL40Q9NQ50 206 aaKnown RBP10.02□□□□□ -0.8
GPATCH8-205ENST00000587228 BTBD7Q9P203 1132 aa10.02□□□□□ -0.8
GPATCH8-205ENST00000587228 SLC27A5Q9Y2P5 690 aa10.02□□□□□ -0.8
GPATCH8-205ENST00000587228 ARL2BPQ9Y2Y0 163 aa10.02□□□□□ -0.8
GPATCH8-205ENST00000587228 KPNA3O00505 521 aaPredicted RBP10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 AIM2O14862 343 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 SKAP2O75563 359 aaPredicted RBP10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 RTN3O95197 1032 aaPredicted RBP10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 CCNE2O96020 404 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 PYGMP11217 842 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 ARF4P18085 180 aaPredicted RBP10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 SDHAF4Q5VUM1 108 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 SLC51AQ86UW1 340 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 PHACTR4Q8IZ21 702 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 EPS8L3Q8TE67 593 aaKnown RBP10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 LENG1Q96BZ8 264 aaPredicted RBP10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 CCT8L2Q96SF2 557 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 SPATA16Q9BXB7 569 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 ADGRE3Q9BY15 652 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 PPCSQ9HAB8 311 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 IL1RL2Q9HB29 575 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 POPDC2Q9HBU9 364 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 ASTN1O14525 1302 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 A0A0A6YYK5 440 aaPredicted RBP10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 A8MX80 341 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 DGKIO75912 1065 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 ACADMP11310 421 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 PGM1P36871 562 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 PLIN5Q00G26 463 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 CXorf38Q8TB03 319 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 TBCBQ99426 244 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 NXF3Q9H4D5 531 aaKnown RBP10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 VIPAS39Q9H9C1 493 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 CAPN10Q9HC96 672 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 THG1LQ9NWX6 298 aaKnown RBP10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 RRN3Q9NYV6 651 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 C5orf58C9J3I9 102 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 KLRC4O43908 158 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 CRTAMO95727 393 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 LMNAP02545 664 aaKnown RBP10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 ITGB6P18564 788 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 RENBPP51606 427 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 CRYBB1P53674 252 aaPredicted RBP10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 ABCE1P61221 599 aaKnown RBP10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 FUT2Q10981 343 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 ECM1Q16610 540 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 AARS2Q5JTZ9 985 aaKnown RBP10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 STRA8Q7Z7C7 330 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 PIGZQ86VD9 579 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 FIBCD1Q8N539 461 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 EPS8L1Q8TE68 723 aa10.02□□□□□ -0.81
GPATCH8-205ENST00000587228 OTULINQ96BN8 352 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms