RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 ARCQ7LC44 396 aa20.04■□□□□ 0.8
DDX39A-204ENST00000586558 YAF2Q8IY57 180 aa20.04■□□□□ 0.8
DDX39A-204ENST00000586558 RSPRY1Q96DX4 576 aa20.04■□□□□ 0.8
DDX39A-204ENST00000586558 PIWIL1Q96J94 861 aaKnown RBP20.04■□□□□ 0.8
DDX39A-204ENST00000586558 SLC2A13Q96QE2 648 aa20.04■□□□□ 0.8
DDX39A-204ENST00000586558 PANX2Q96RD6 677 aa20.04■□□□□ 0.8
DDX39A-204ENST00000586558 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.04■□□□□ 0.8
DDX39A-204ENST00000586558 TRMT61BQ9BVS5 477 aaKnown RBP20.04■□□□□ 0.8
DDX39A-204ENST00000586558 SMPD4Q9NXE4 827 aa20.04■□□□□ 0.8
DDX39A-204ENST00000586558 MARCH2Q9P0N8 246 aa20.04■□□□□ 0.8
DDX39A-204ENST00000586558 ADAMTS1Q9UHI8 967 aa20.04■□□□□ 0.8
DDX39A-204ENST00000586558 NCOR1O75376 2440 aa20.04■□□□□ 0.8
DDX39A-204ENST00000586558 LEFTY2O00292 366 aa20.03■□□□□ 0.8
DDX39A-204ENST00000586558 CAPN9O14815 690 aa20.03■□□□□ 0.8
DDX39A-204ENST00000586558 RTN2O75298 545 aa20.03■□□□□ 0.8
DDX39A-204ENST00000586558 DAB1O75553 588 aa20.03■□□□□ 0.8
DDX39A-204ENST00000586558 FYNP06241 537 aa20.03■□□□□ 0.8
DDX39A-204ENST00000586558 PLEKP08567 350 aaPredicted RBP20.03■□□□□ 0.8
DDX39A-204ENST00000586558 EIF4A3P38919 411 aaKnown RBP20.03■□□□□ 0.8
DDX39A-204ENST00000586558 KPNA1P52294 538 aaPredicted RBP20.03■□□□□ 0.8
DDX39A-204ENST00000586558 EFEMP1Q12805 493 aa20.03■□□□□ 0.8
DDX39A-204ENST00000586558 MCOLN2Q8IZK6 566 aa20.03■□□□□ 0.8
DDX39A-204ENST00000586558 TRIM11Q96F44 468 aa20.03■□□□□ 0.8
DDX39A-204ENST00000586558 RPP25Q9BUL9 199 aaKnown RBP20.03■□□□□ 0.8
DDX39A-204ENST00000586558 KLF16Q9BXK1 252 aaPredicted RBP20.03■□□□□ 0.8
DDX39A-204ENST00000586558 PLA2G2FQ9BZM2 168 aa20.03■□□□□ 0.8
DDX39A-204ENST00000586558 SMOC2Q9H3U7 446 aa20.03■□□□□ 0.8
DDX39A-204ENST00000586558 RASAL2Q9UJF2 1139 aa20.03■□□□□ 0.8
DDX39A-204ENST00000586558 NUDT5Q9UKK9 219 aa20.03■□□□□ 0.8
DDX39A-204ENST00000586558 HBS1LQ9Y450 684 aaKnown RBP20.03■□□□□ 0.8
DDX39A-204ENST00000586558 NNTQ13423 1086 aa20.02■□□□□ 0.8
DDX39A-204ENST00000586558 MTF1Q14872 753 aa20.02■□□□□ 0.8
DDX39A-204ENST00000586558 TAF5Q15542 800 aa20.02■□□□□ 0.8
DDX39A-204ENST00000586558 ARHGAP29Q52LW3 1261 aa20.02■□□□□ 0.8
DDX39A-204ENST00000586558 C2CD6Q53TS8 623 aa20.02■□□□□ 0.8
DDX39A-204ENST00000586558 CC2D1AQ6P1N0 951 aaPredicted RBP20.02■□□□□ 0.8
DDX39A-204ENST00000586558 MIB1Q86YT6 1006 aa20.02■□□□□ 0.8
DDX39A-204ENST00000586558 UBALD2Q8IYN6 164 aa20.02■□□□□ 0.8
DDX39A-204ENST00000586558 C3orf20Q8ND61 904 aa20.02■□□□□ 0.8
DDX39A-204ENST00000586558 ST13P5Q8NFI4 369 aaPredicted RBP20.02■□□□□ 0.8
DDX39A-204ENST00000586558 KHSRPQ92945 711 aaKnown RBP eCLIP20.02■□□□□ 0.8
DDX39A-204ENST00000586558 LRRC3BQ96PB8 259 aa20.02■□□□□ 0.8
DDX39A-204ENST00000586558 ISCUQ9H1K1 167 aa20.02■□□□□ 0.8
DDX39A-204ENST00000586558 DEF6Q9H4E7 631 aa20.02■□□□□ 0.8
DDX39A-204ENST00000586558 RRN3Q9NYV6 651 aa20.02■□□□□ 0.8
DDX39A-204ENST00000586558 TAS2R14Q9NYV8 317 aa20.02■□□□□ 0.8
DDX39A-204ENST00000586558 CFAP97Q9P2B7 532 aa20.02■□□□□ 0.8
DDX39A-204ENST00000586558 A0A087X0T9 212 aa20.01■□□□□ 0.79
DDX39A-204ENST00000586558 E2F8A0AVK6 867 aa20.01■□□□□ 0.79
DDX39A-204ENST00000586558 GOLGA8SH3BPF8 625 aa20.01■□□□□ 0.79
DDX39A-204ENST00000586558 MDM4O15151 490 aa20.01■□□□□ 0.79
DDX39A-204ENST00000586558 CHADO15335 359 aa20.01■□□□□ 0.79
DDX39A-204ENST00000586558 FTLP02792 175 aaPredicted RBP20.01■□□□□ 0.79
DDX39A-204ENST00000586558 FAM228BP0C875 321 aa20.01■□□□□ 0.79
DDX39A-204ENST00000586558 MYBL1P10243 752 aa20.01■□□□□ 0.79
DDX39A-204ENST00000586558 SRFP11831 508 aa20.01■□□□□ 0.79
DDX39A-204ENST00000586558 ZXDBP98169 803 aa20.01■□□□□ 0.79
DDX39A-204ENST00000586558 SLC18A3Q16572 532 aa20.01■□□□□ 0.79
DDX39A-204ENST00000586558 DCAF6Q58WW2 860 aa20.01■□□□□ 0.79
DDX39A-204ENST00000586558 ALKBH5Q6P6C2 394 aaKnown RBP20.01■□□□□ 0.79
DDX39A-204ENST00000586558 DQX1Q8TE96 717 aaKnown RBP20.01■□□□□ 0.79
DDX39A-204ENST00000586558 CCDC42Q96M95 316 aa20.01■□□□□ 0.79
DDX39A-204ENST00000586558 SERPINB11Q96P15 392 aa20.01■□□□□ 0.79
DDX39A-204ENST00000586558 SLC2A4RGQ9NR83 387 aa20.01■□□□□ 0.79
DDX39A-204ENST00000586558 TMEM51Q9NW97 253 aa20.01■□□□□ 0.79
DDX39A-204ENST00000586558 LSM7Q9UK45 103 aaKnown RBP20.01■□□□□ 0.79
DDX39A-204ENST00000586558 DUSP12Q9UNI6 340 aa20.01■□□□□ 0.79
DDX39A-204ENST00000586558 NAALADL1Q9UQQ1 740 aa20.01■□□□□ 0.79
DDX39A-204ENST00000586558 FAM170AA1A519 330 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 TMCO5BA8MYB1 307 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 SLC9A3R1O14745 358 aaPredicted RBP20■□□□□ 0.79
DDX39A-204ENST00000586558 ZNF263O14978 683 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 GRAP2O75791 330 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 NOS2P35228 1153 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 MATKP42679 507 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 MRE11P49959 708 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 PFKPQ01813 784 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 GRM2Q14416 872 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 PDGFRLQ15198 375 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 TRIP4Q15650 581 aaPredicted RBP20■□□□□ 0.79
DDX39A-204ENST00000586558 ASTE1Q2TB18 679 aaPredicted RBP20■□□□□ 0.79
DDX39A-204ENST00000586558 SYPL2Q5VXT5 272 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 DNAJC24Q6P3W2 148 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 DEFB106AQ8N104 65 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 RIN3Q8TB24 985 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 DNASE1L2Q92874 299 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 IRF7Q92985 503 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 PLD4Q96BZ4 506 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 DCLK3Q9C098 648 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 BRD9Q9H8M2 597 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 NHEJ1Q9H9Q4 299 aaPredicted RBP20■□□□□ 0.79
DDX39A-204ENST00000586558 TRPV5Q9NQA5 729 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 GKN1Q9NS71 199 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 TBC1D14Q9P2M4 693 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 MUTYHQ9UIF7 546 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 TMEM59LQ9UK28 342 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 STAP1Q9ULZ2 295 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 SH3BP1Q9Y3L3 701 aa20■□□□□ 0.79
DDX39A-204ENST00000586558 HELZP42694 1942 aaKnown RBP20■□□□□ 0.79
DDX39A-204ENST00000586558 SLC12A8A0AV02 714 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms