RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 RRN3Q9NYV6 651 aa23.18■■□□□ 1.3
CIRBP-208ENST00000586548 CEP350Q5VT06 3117 aa23.17■■□□□ 1.3
CIRBP-208ENST00000586548 ZFXP17010 805 aaPredicted RBP23.17■■□□□ 1.3
CIRBP-208ENST00000586548 STIP1P31948 543 aaKnown RBP23.17■■□□□ 1.3
CIRBP-208ENST00000586548 OR1G1P47890 313 aa23.17■■□□□ 1.3
CIRBP-208ENST00000586548 RABGGTBP53611 331 aa23.17■■□□□ 1.3
CIRBP-208ENST00000586548 GDF10P55107 478 aa23.17■■□□□ 1.3
CIRBP-208ENST00000586548 MTFR1Q15390 333 aa23.17■■□□□ 1.3
CIRBP-208ENST00000586548 RNASEH2BQ5TBB1 312 aaKnown RBP23.17■■□□□ 1.3
CIRBP-208ENST00000586548 KCTD16Q68DU8 428 aa23.17■■□□□ 1.3
CIRBP-208ENST00000586548 LRRTM3Q86VH5 581 aa23.17■■□□□ 1.3
CIRBP-208ENST00000586548 FAM131BQ86XD5 332 aa23.17■■□□□ 1.3
CIRBP-208ENST00000586548 UNC45BQ8IWX7 931 aa23.17■■□□□ 1.3
CIRBP-208ENST00000586548 TMEM209Q96SK2 561 aa23.17■■□□□ 1.3
CIRBP-208ENST00000586548 TMEM109Q9BVC6 243 aa23.17■■□□□ 1.3
CIRBP-208ENST00000586548 NRDE2Q9H7Z3 1164 aa23.17■■□□□ 1.3
CIRBP-208ENST00000586548 RCOR3Q9P2K3 495 aaPredicted RBP23.17■■□□□ 1.3
CIRBP-208ENST00000586548 SHOC2Q9UQ13 582 aa23.17■■□□□ 1.3
CIRBP-208ENST00000586548 PCDHB7Q9Y5E2 793 aa23.17■■□□□ 1.3
CIRBP-208ENST00000586548 TANC1Q9C0D5 1861 aa23.17■■□□□ 1.3
CIRBP-208ENST00000586548 YJEFN3A6XGL0 299 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 E7ENQ6 273 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 M0QYT0 321 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 TRAPPC3O43617 180 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 LTFP02788 710 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 SYPL2Q5VXT5 272 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 DARS2Q6PI48 645 aaKnown RBP23.16■■□□□ 1.3
CIRBP-208ENST00000586548 C1orf228Q6PIY5 440 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 C4orf50Q6ZRC1 276 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 ABI1Q8IZP0 508 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 SH2D3CQ8N5H7 860 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 DNAJC5GQ8N7S2 189 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 PRDM16Q9HAZ2 1276 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.16■■□□□ 1.3
CIRBP-208ENST00000586548 COL4A4P53420 1690 aaPredicted RBP23.16■■□□□ 1.3
CIRBP-208ENST00000586548 CAPN9O14815 690 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 SHBGP04278 402 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 FYNP06241 537 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 USP17L7P0C7H9 530 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 CCL5P13501 91 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 PITX1P78337 314 aaPredicted RBP23.16■■□□□ 1.3
CIRBP-208ENST00000586548 DEUP1Q05D60 604 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 PM20D1Q6GTS8 502 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 SLC9A7Q96T83 725 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 CENPHQ9H3R5 247 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 C10orf88Q9H8K7 445 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 NAALADL1Q9UQQ1 740 aa23.16■■□□□ 1.3
CIRBP-208ENST00000586548 CFAP69A5D8W1 941 aa23.15■■□□□ 1.3
CIRBP-208ENST00000586548 H7C0C1 242 aa23.15■■□□□ 1.3
CIRBP-208ENST00000586548 OAZ2O95190 189 aa23.15■■□□□ 1.3
CIRBP-208ENST00000586548 TTC4O95801 387 aa23.15■■□□□ 1.3
CIRBP-208ENST00000586548 RPL22P35268 128 aaKnown RBP23.15■■□□□ 1.3
CIRBP-208ENST00000586548 ATP5OP48047 213 aa23.15■■□□□ 1.3
CIRBP-208ENST00000586548 BHLHA9Q7RTU4 235 aa23.15■■□□□ 1.3
CIRBP-208ENST00000586548 SPATA2LQ8IUW3 424 aaPredicted RBP23.15■■□□□ 1.3
CIRBP-208ENST00000586548 FAM71DQ8N9W8 422 aa23.15■■□□□ 1.3
CIRBP-208ENST00000586548 CSPG4P5Q96PW8 444 aa23.15■■□□□ 1.3
CIRBP-208ENST00000586548 BEGAINQ9BUH8 593 aa23.15■■□□□ 1.3
CIRBP-208ENST00000586548 RNF208Q9H0X6 261 aa23.15■■□□□ 1.3
CIRBP-208ENST00000586548 DNAJB4Q9UDY4 337 aa23.15■■□□□ 1.3
CIRBP-208ENST00000586548 PRG3Q9Y2Y8 225 aaPredicted RBP23.15■■□□□ 1.3
CIRBP-208ENST00000586548 PQBP1O60828 265 aaKnown RBP23.14■■□□□ 1.3
CIRBP-208ENST00000586548 ARL4AP40617 200 aa23.14■■□□□ 1.3
CIRBP-208ENST00000586548 AIF1P55008 147 aa23.14■■□□□ 1.3
CIRBP-208ENST00000586548 UBAP2Q5T6F2 1119 aaKnown RBP23.14■■□□□ 1.3
CIRBP-208ENST00000586548 EMC10Q5UCC4 262 aa23.14■■□□□ 1.3
CIRBP-208ENST00000586548 ZC3H18Q86VM9 953 aaKnown RBP23.14■■□□□ 1.3
CIRBP-208ENST00000586548 PGAP3Q96FM1 320 aaPredicted RBP23.14■■□□□ 1.3
CIRBP-208ENST00000586548 FARP1Q9Y4F1 1045 aaPredicted RBP23.14■■□□□ 1.3
CIRBP-208ENST00000586548 SMAPO00193 183 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 SYN3O14994 580 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 MYCP01106 439 aaPredicted RBP23.13■■□□□ 1.29
CIRBP-208ENST00000586548 NR2C2P49116 596 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 LMAN1P49257 510 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 SKOR1P84550 965 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 KDM7AQ6ZMT4 941 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 PPIL6Q8IXY8 311 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 SLC7A14Q8TBB6 771 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 PRCCQ92733 491 aaPredicted RBP23.13■■□□□ 1.29
CIRBP-208ENST00000586548 NTAN1Q96AB6 310 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 RTP4Q96DX8 246 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 PWWP2AQ96N64 755 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 CASD1Q96PB1 797 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 RBM15Q96T37 977 aaKnown RBP eCLIP23.13■■□□□ 1.29
CIRBP-208ENST00000586548 TRIM62Q9BVG3 475 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 ZCWPW1Q9H0M4 648 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 PIGVQ9NUD9 493 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 DNAJC17Q9NVM6 304 aaKnown RBP23.13■■□□□ 1.29
CIRBP-208ENST00000586548 NINJ2Q9NZG7 142 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 CWC15Q9P013 229 aaKnown RBP23.13■■□□□ 1.29
CIRBP-208ENST00000586548 LRFN2Q9ULH4 789 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 HEY1Q9Y5J3 304 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 USP3Q9Y6I4 520 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 BCLAF3A2AJT9 711 aaKnown RBP23.13■■□□□ 1.29
CIRBP-208ENST00000586548 HOXA2O43364 376 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 TADA2AO75478 443 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 NCAM1P13591 858 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 NR1D1P20393 614 aa23.13■■□□□ 1.29
CIRBP-208ENST00000586548 CTCFP49711 727 aaPredicted RBP23.13■■□□□ 1.29
CIRBP-208ENST00000586548 NME3Q13232 169 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms