RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 TRIML1Q8N9V2 468 aa12.27□□□□□ -0.45
LIG3-207ENST00000586119 PAGE5Q96GU1 130 aa12.27□□□□□ -0.45
LIG3-207ENST00000586119 TNIP3Q96KP6 325 aa12.27□□□□□ -0.45
LIG3-207ENST00000586119 CAPN10Q9HC96 672 aa12.27□□□□□ -0.45
LIG3-207ENST00000586119 COMMD8Q9NX08 183 aa12.27□□□□□ -0.45
LIG3-207ENST00000586119 CACNA2D2Q9NY47 1150 aa12.27□□□□□ -0.45
LIG3-207ENST00000586119 SLC6A14Q9UN76 642 aa12.27□□□□□ -0.45
LIG3-207ENST00000586119 ATP8B3O60423 1300 aa12.27□□□□□ -0.45
LIG3-207ENST00000586119 KNL1Q8NG31 2342 aa12.27□□□□□ -0.45
LIG3-207ENST00000586119 PLXNB3Q9ULL4 1909 aa12.27□□□□□ -0.45
LIG3-207ENST00000586119 ZZEF1O43149 2961 aa12.26□□□□□ -0.45
LIG3-207ENST00000586119 SRRM3A6NNA2 597 aaPredicted RBP12.26□□□□□ -0.45
LIG3-207ENST00000586119 AP5Z1O43299 807 aa12.26□□□□□ -0.45
LIG3-207ENST00000586119 ACTN4O43707 911 aaKnown RBP12.26□□□□□ -0.45
LIG3-207ENST00000586119 HLA-DRAP01903 254 aa12.26□□□□□ -0.45
LIG3-207ENST00000586119 KLKB1P03952 638 aa12.26□□□□□ -0.45
LIG3-207ENST00000586119 RARGP13631 454 aa12.26□□□□□ -0.45
LIG3-207ENST00000586119 CD59P13987 128 aa12.26□□□□□ -0.45
LIG3-207ENST00000586119 ACO1P21399 889 aaKnown RBP12.26□□□□□ -0.45
LIG3-207ENST00000586119 ATP5C1P36542 298 aaKnown RBP12.26□□□□□ -0.45
LIG3-207ENST00000586119 ME1P48163 572 aa12.26□□□□□ -0.45
LIG3-207ENST00000586119 BYSLQ13895 437 aaKnown RBP12.26□□□□□ -0.45
LIG3-207ENST00000586119 SPDYCQ5MJ68 293 aa12.26□□□□□ -0.45
LIG3-207ENST00000586119 CEP135Q66GS9 1140 aa12.26□□□□□ -0.45
LIG3-207ENST00000586119 MINDY1Q8N5J2 469 aa12.26□□□□□ -0.45
LIG3-207ENST00000586119 SPRYD3Q8NCJ5 442 aa12.26□□□□□ -0.45
LIG3-207ENST00000586119 KCNV2Q8TDN2 545 aa12.26□□□□□ -0.45
LIG3-207ENST00000586119 HSPA12BQ96MM6 686 aa12.26□□□□□ -0.45
LIG3-207ENST00000586119 GABRG3Q99928 467 aa12.26□□□□□ -0.45
LIG3-207ENST00000586119 TLR8Q9NR97 1041 aaKnown RBP12.26□□□□□ -0.45
LIG3-207ENST00000586119 FAM13BQ9NYF5 915 aa12.26□□□□□ -0.45
LIG3-207ENST00000586119 CGNQ9P2M7 1197 aaKnown RBP12.26□□□□□ -0.45
LIG3-207ENST00000586119 CLEC4EQ9ULY5 219 aa12.26□□□□□ -0.45
LIG3-207ENST00000586119 SCML2Q9UQR0 700 aa12.26□□□□□ -0.45
LIG3-207ENST00000586119 SPEGQ15772 3267 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 FAM208BQ5VWN6 2430 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 TAF4O00268 1085 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 CACNG3O60359 315 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 F13A1P00488 732 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 ASS1P00966 412 aaKnown RBP12.25□□□□□ -0.45
LIG3-207ENST00000586119 NR3C1P04150 777 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 HMBSP08397 361 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 SERPINF2P08697 491 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 PRR29P0C7W0 189 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 FAM200BP0CF97 657 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 TRIM49P0CI25 452 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 TRIM49CP0CI26 452 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 ZSCAN22P10073 491 aaPredicted RBP12.25□□□□□ -0.45
LIG3-207ENST00000586119 CD58P19256 250 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 AP3M2P53677 418 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 DNM1Q05193 864 aaKnown RBP12.25□□□□□ -0.45
LIG3-207ENST00000586119 GFPT1Q06210 699 aaPredicted RBP12.25□□□□□ -0.45
LIG3-207ENST00000586119 PPP3CAQ08209 521 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 GEN1Q17RS7 908 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 SLC36A4Q6YBV0 504 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 Q6ZNB5 142 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 TRMT11Q7Z4G4 463 aaKnown RBP12.25□□□□□ -0.45
LIG3-207ENST00000586119 SLC9A9Q8IVB4 645 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 CYFIP2Q96F07 1278 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 MRGPRX1Q96LB2 322 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 XPO6Q96QU8 1125 aaKnown RBP12.25□□□□□ -0.45
LIG3-207ENST00000586119 HNRNPABQ99729 332 aaKnown RBP12.25□□□□□ -0.45
LIG3-207ENST00000586119 DUSP9Q99956 384 aaKnown RBP12.25□□□□□ -0.45
LIG3-207ENST00000586119 FBXO44Q9H4M3 255 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 SLC32A1Q9H598 525 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 MMRN2Q9H8L6 949 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 MAGEF1Q9HAY2 307 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 CYLDQ9NQC7 956 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.25□□□□□ -0.45
LIG3-207ENST00000586119 MARK1Q9P0L2 795 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 MAPK8IP1Q9UQF2 711 aa12.25□□□□□ -0.45
LIG3-207ENST00000586119 WDFY3Q8IZQ1 3526 aa12.24□□□□□ -0.45
LIG3-207ENST00000586119 A0A1B0GVL5 298 aa12.24□□□□□ -0.45
LIG3-207ENST00000586119 ARHGAP33O14559 1287 aa12.24□□□□□ -0.45
LIG3-207ENST00000586119 SH3BP5O60239 455 aa12.24□□□□□ -0.45
LIG3-207ENST00000586119 OPHN1O60890 802 aa12.24□□□□□ -0.45
LIG3-207ENST00000586119 STC2O76061 302 aa12.24□□□□□ -0.45
LIG3-207ENST00000586119 KIF20AO95235 890 aa12.24□□□□□ -0.45
LIG3-207ENST00000586119 RPN1P04843 607 aaKnown RBP12.24□□□□□ -0.45
LIG3-207ENST00000586119 SLFN14P0C7P3 912 aa12.24□□□□□ -0.45
LIG3-207ENST00000586119 GCLMP48507 274 aa12.24□□□□□ -0.45
LIG3-207ENST00000586119 DGKGP49619 791 aa12.24□□□□□ -0.45
LIG3-207ENST00000586119 KIF11P52732 1056 aa12.24□□□□□ -0.45
LIG3-207ENST00000586119 ATXN3P54252 364 aaPredicted RBP12.24□□□□□ -0.45
LIG3-207ENST00000586119 ZNF394Q53GI3 561 aa12.24□□□□□ -0.45
LIG3-207ENST00000586119 C10orf120Q5SQS8 335 aa12.24□□□□□ -0.45
LIG3-207ENST00000586119 PPP1R26Q5T8A7 1209 aaPredicted RBP12.24□□□□□ -0.45
LIG3-207ENST00000586119 KIAA1324Q6UXG2 1013 aaKnown RBP12.24□□□□□ -0.45
LIG3-207ENST00000586119 UNC93AQ86WB7 457 aa12.24□□□□□ -0.45
LIG3-207ENST00000586119 CEP57L1Q8IYX8 460 aa12.24□□□□□ -0.45
LIG3-207ENST00000586119 RGL4Q8IZJ4 473 aa12.24□□□□□ -0.45
LIG3-207ENST00000586119 HDDC3Q8N4P3 179 aa12.24□□□□□ -0.45
LIG3-207ENST00000586119 PNPLA1Q8N8W4 532 aa12.24□□□□□ -0.45
LIG3-207ENST00000586119 CEP76Q8TAP6 659 aa12.24□□□□□ -0.45
LIG3-207ENST00000586119 TMC2Q8TDI7 906 aa12.24□□□□□ -0.45
LIG3-207ENST00000586119 TAS1R2Q8TE23 839 aa12.24□□□□□ -0.45
LIG3-207ENST00000586119 ZCCHC14Q8WYQ9 949 aaKnown RBP12.24□□□□□ -0.45
LIG3-207ENST00000586119 NDRG1Q92597 394 aaKnown RBP12.24□□□□□ -0.45
LIG3-207ENST00000586119 ZNF419Q96HQ0 510 aaPredicted RBP12.24□□□□□ -0.45
LIG3-207ENST00000586119 WDR35Q9P2L0 1181 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms