RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 SLC32A1Q9H598 525 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 FAM49BQ9NUQ9 324 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 TMEM74BQ9NUR3 256 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 DNAJC17Q9NVM6 304 aaKnown RBP15.82■□□□□ 0.12
VAPA-209ENST00000585042 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.82■□□□□ 0.12
VAPA-209ENST00000585042 CLIC5Q9NZA1 410 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 FBXO10Q9UK96 956 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 HCN2Q9UL51 889 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 CIZ1Q9ULV3 898 aaPredicted RBP15.82■□□□□ 0.12
VAPA-209ENST00000585042 SLC6A14Q9UN76 642 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 WASF3Q9UPY6 502 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 USP24Q9UPU5 2620 aa15.82■□□□□ 0.12
VAPA-209ENST00000585042 FAM237AA0A1B0GTK4 181 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 A0A1B0GVL5 298 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 A0A1W2PQF6 199 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 NEDD8-MDP1E9PL57 170 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 GIPC1O14908 333 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 NPC1O15118 1278 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 CILPO75339 1184 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 SERPINF2P08697 491 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 IRF1P10914 325 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 RARGP13631 454 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 KRT13P13646 458 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 ACO1P21399 889 aaKnown RBP15.81■□□□□ 0.12
VAPA-209ENST00000585042 ADORA2BP29275 332 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 GTF2H1P32780 548 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 PSMC2P35998 433 aaKnown RBP15.81■□□□□ 0.12
VAPA-209ENST00000585042 KIF11P52732 1056 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 COG7P83436 770 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 ZNF252P-AS1Q0IIN9 211 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 BECN1Q14457 450 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 SPOPLQ6IQ16 392 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 CCDC186Q7Z3E2 898 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 FRMD1Q8N878 549 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 ELMO3Q96BJ8 720 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 DUSP16Q9BY84 665 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 CD248Q9HCU0 757 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 OSER1Q9NX31 292 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 HMGXB4Q9UGU5 601 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 TNRC6BQ9UPQ9 1833 aaKnown RBP15.81■□□□□ 0.12
VAPA-209ENST00000585042 USP3Q9Y6I4 520 aa15.81■□□□□ 0.12
VAPA-209ENST00000585042 CEP295Q9C0D2 2601 aa15.8■□□□□ 0.12
VAPA-209ENST00000585042 CISD3P0C7P0 127 aa15.8■□□□□ 0.12
VAPA-209ENST00000585042 RALAP11233 206 aa15.8■□□□□ 0.12
VAPA-209ENST00000585042 ENGP17813 658 aa15.8■□□□□ 0.12
VAPA-209ENST00000585042 NR2F2P24468 414 aa15.8■□□□□ 0.12
VAPA-209ENST00000585042 CHKAP35790 457 aa15.8■□□□□ 0.12
VAPA-209ENST00000585042 SYKP43405 635 aa15.8■□□□□ 0.12
VAPA-209ENST00000585042 DGKGP49619 791 aa15.8■□□□□ 0.12
VAPA-209ENST00000585042 RPL6Q02878 288 aaKnown RBP15.8■□□□□ 0.12
VAPA-209ENST00000585042 ORC1Q13415 861 aa15.8■□□□□ 0.12
VAPA-209ENST00000585042 Q6ZNB5 142 aa15.8■□□□□ 0.12
VAPA-209ENST00000585042 GPRIN1Q7Z2K8 1008 aa15.8■□□□□ 0.12
VAPA-209ENST00000585042 METTL3Q86U44 580 aaKnown RBP15.8■□□□□ 0.12
VAPA-209ENST00000585042 CHPFQ8IZ52 775 aa15.8■□□□□ 0.12
VAPA-209ENST00000585042 GUF1Q8N442 669 aaKnown RBP15.8■□□□□ 0.12
VAPA-209ENST00000585042 IPO4Q8TEX9 1081 aaKnown RBP15.8■□□□□ 0.12
VAPA-209ENST00000585042 DCLK3Q9C098 648 aa15.8■□□□□ 0.12
VAPA-209ENST00000585042 NIF3L1Q9GZT8 377 aa15.8■□□□□ 0.12
VAPA-209ENST00000585042 TMEM8AQ9HCN3 771 aa15.8■□□□□ 0.12
VAPA-209ENST00000585042 SLC27A6Q9Y2P4 619 aa15.8■□□□□ 0.12
VAPA-209ENST00000585042 PI4KAP42356 2102 aa15.8■□□□□ 0.12
VAPA-209ENST00000585042 IGHV1OR15-9A0A0B4J2B8 117 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 A0A1W2PQH9 124 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 TMEM8BA6NDV4 472 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 CYP26A1O43174 497 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 ITPKAP23677 461 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 GCLMP48507 274 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 GFPT1Q06210 699 aaPredicted RBP15.79■□□□□ 0.12
VAPA-209ENST00000585042 ZNF33AQ06730 810 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 PPP3CAQ08209 521 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 SEMA3BQ13214 749 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 ADAM9Q13443 819 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 PKP1Q13835 747 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 HNRNPDQ14103 355 aaKnown RBP15.79■□□□□ 0.12
VAPA-209ENST00000585042 UAP1L1Q3KQV9 507 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 C10orf120Q5SQS8 335 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 EGFLAMQ63HQ2 1017 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 TPGS1Q6ZTW0 290 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 PIP4P1Q86T03 277 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 MIB1Q86YT6 1006 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 FAM186BQ8IYM0 893 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 ARHGAP18Q8N392 663 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 TAS1R2Q8TE23 839 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 ZNF419Q96HQ0 510 aaPredicted RBP15.79■□□□□ 0.12
VAPA-209ENST00000585042 SPATA32Q96LK8 384 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 TWNKQ96RR1 684 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 NMUR1Q9HB89 426 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 APOBEC3GQ9HC16 384 aaKnown RBP15.79■□□□□ 0.12
VAPA-209ENST00000585042 ZDHHC4Q9NPG8 344 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 CALCOCO1Q9P1Z2 691 aa15.79■□□□□ 0.12
VAPA-209ENST00000585042 GON4LQ3T8J9 2241 aa15.78■□□□□ 0.12
VAPA-209ENST00000585042 A0A1W2PQD8 194 aa15.78■□□□□ 0.12
VAPA-209ENST00000585042 PCNX2A6NKB5 2137 aa15.78■□□□□ 0.12
VAPA-209ENST00000585042 PRRT4C9JH25 899 aa15.78■□□□□ 0.12
VAPA-209ENST00000585042 TRIM24O15164 1050 aa15.78■□□□□ 0.12
VAPA-209ENST00000585042 STX10O60499 249 aa15.78■□□□□ 0.12
VAPA-209ENST00000585042 STC2O76061 302 aa15.78■□□□□ 0.12
VAPA-209ENST00000585042 ATXN3P54252 364 aaPredicted RBP15.78■□□□□ 0.12
VAPA-209ENST00000585042 KRT85P78386 507 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms