RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 GLI1P08151 1106 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 IRF1P10914 325 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 GBP1P32455 592 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 VIPR2P41587 438 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 KPNA1P52294 538 aaPredicted RBP14.5□□□□□ -0.09
TRAF4-215ENST00000584944 COG7P83436 770 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 SLC6A3Q01959 620 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 CENPCQ03188 943 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 TDGQ13569 410 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 HTR4Q13639 388 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 PTPN20Q4JDL3 420 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 DCAF6Q58WW2 860 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 ASTLQ6HA08 431 aaPredicted RBP14.5□□□□□ -0.09
TRAF4-215ENST00000584944 ACAD10Q6JQN1 1059 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 PARM1Q6UWI2 310 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 FAM183BPQ6ZVS7 135 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 ZNF571Q7Z3V5 609 aaPredicted RBP14.5□□□□□ -0.09
TRAF4-215ENST00000584944 ST13P5Q8NFI4 369 aaPredicted RBP14.5□□□□□ -0.09
TRAF4-215ENST00000584944 CLEC4CQ8WTT0 213 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 DEPDC1BQ8WUY9 529 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 RNF34Q969K3 372 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 ELSPBP1Q96BH3 223 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 SELENOOQ9BVL4 669 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 TRMT61BQ9BVS5 477 aaKnown RBP14.5□□□□□ -0.09
TRAF4-215ENST00000584944 BRD9Q9H8M2 597 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 NMUR1Q9HB89 426 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 LUC7LQ9NQ29 371 aaKnown RBP14.5□□□□□ -0.09
TRAF4-215ENST00000584944 ADAMTS1Q9UHI8 967 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 NUDT5Q9UKK9 219 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 CPQQ9Y646 472 aa14.5□□□□□ -0.09
TRAF4-215ENST00000584944 HEPACAM2A8MVW5 462 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 PROB1E7EW31 1015 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 SLC9A3R1O14745 358 aaPredicted RBP14.49□□□□□ -0.09
TRAF4-215ENST00000584944 ZNF263O14978 683 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 GRAP2O75791 330 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 ZDHHC11BP0C7U3 371 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 PSMC3P17980 439 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 MMP8P22894 467 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 WEE1P30291 646 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 HNRNPH3P31942 346 aaKnown RBP14.49□□□□□ -0.09
TRAF4-215ENST00000584944 EIF4A3P38919 411 aaKnown RBP14.49□□□□□ -0.09
TRAF4-215ENST00000584944 CLCN5P51795 746 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 SLC7A9P82251 487 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 CDK17Q00537 523 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 C1QBPQ07021 282 aaKnown RBP14.49□□□□□ -0.09
TRAF4-215ENST00000584944 ZNF268Q14587 947 aaPredicted RBP14.49□□□□□ -0.09
TRAF4-215ENST00000584944 TANGO2Q6ICL3 276 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 DNAJC24Q6P3W2 148 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 DCUN1D2Q6PH85 259 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 KLHDC10Q6PID8 442 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 SND1Q7KZF4 910 aaKnown RBP eCLIP14.49□□□□□ -0.09
TRAF4-215ENST00000584944 SCD5Q86SK9 330 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 BPIFB1Q8TDL5 484 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 SH3RF2Q8TEC5 729 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 FGF14Q92915 247 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 USP13Q92995 863 aaPredicted RBP14.49□□□□□ -0.09
TRAF4-215ENST00000584944 PCDHB18PQ96TA0 734 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 FAM204AQ9H8W3 233 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 TRPV4Q9HBA0 871 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 OBP2AQ9NY56 170 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 CFAP97Q9P2B7 532 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 FBXL21Q9UKT6 434 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 STAP1Q9ULZ2 295 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 ARHGAP26Q9UNA1 814 aa14.49□□□□□ -0.09
TRAF4-215ENST00000584944 SLC12A8A0AV02 714 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 ANHXE9PGG2 379 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 RTN2O75298 545 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 PRAMEF12O95522 483 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 TBX18O95935 607 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 FTLP02792 175 aaPredicted RBP14.48□□□□□ -0.09
TRAF4-215ENST00000584944 HMBSP08397 361 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 MYBL1P10243 752 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 GZMAP12544 262 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 UNGP13051 313 aaPredicted RBP14.48□□□□□ -0.09
TRAF4-215ENST00000584944 GDI1P31150 447 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 IFNAR2P48551 515 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 RPL34P49207 117 aaKnown RBP14.48□□□□□ -0.09
TRAF4-215ENST00000584944 HARS2P49590 506 aaKnown RBP14.48□□□□□ -0.09
TRAF4-215ENST00000584944 GSDMDP57764 484 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 PFKPQ01813 784 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 TBX2Q13207 712 aaPredicted RBP14.48□□□□□ -0.09
TRAF4-215ENST00000584944 GRM2Q14416 872 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 GSE1Q14687 1217 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 SPA17Q15506 151 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 ARHGAP29Q52LW3 1261 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 C2CD6Q53TS8 623 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 CCDC122Q5T0U0 273 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 E4F1Q66K89 784 aaPredicted RBP14.48□□□□□ -0.09
TRAF4-215ENST00000584944 PHLDB2Q86SQ0 1253 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 PHF13Q86YI8 300 aaPredicted RBP14.48□□□□□ -0.09
TRAF4-215ENST00000584944 MFSD6LQ8IWD5 586 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 CSGALNACT1Q8TDX6 532 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 RSAD2Q8WXG1 361 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 IRF7Q92985 503 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 ZNF653Q96CK0 615 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 VCPIP1Q96JH7 1222 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 SERPINB11Q96P15 392 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 PANX2Q96RD6 677 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 SLC22A12Q96S37 553 aa14.48□□□□□ -0.09
TRAF4-215ENST00000584944 RNF38Q9H0F5 515 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms