RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 CD4P01730 458 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 PIGRP01833 764 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 GNAT1P11488 350 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 BDNFP23560 247 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 BCAT1P54687 386 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 FSCN1Q16658 493 aaKnown RBP11.71□□□□□ -0.53
TOP3A-217ENST00000584582 SPOUT1Q5T280 376 aaKnown RBP11.71□□□□□ -0.53
TOP3A-217ENST00000584582 GPR152Q8TDT2 470 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 ZNF669Q96BR6 464 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-217ENST00000584582 CCDC124Q96CT7 223 aaKnown RBP11.71□□□□□ -0.53
TOP3A-217ENST00000584582 SGF29Q96ES7 293 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 PEBP4Q96S96 227 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 FAM167BQ9BTA0 163 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 SHOC2Q9UQ13 582 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 RPS6KL1Q9Y6S9 549 aa11.71□□□□□ -0.53
TOP3A-217ENST00000584582 MYO7AQ13402 2215 aa11.71□□□□□ -0.54
TOP3A-217ENST00000584582 ZBTB42B2RXF5 422 aa11.71□□□□□ -0.54
TOP3A-217ENST00000584582 EDNRBP24530 442 aa11.71□□□□□ -0.54
TOP3A-217ENST00000584582 CDC25CP30307 473 aa11.71□□□□□ -0.54
TOP3A-217ENST00000584582 PITX1P78337 314 aaPredicted RBP11.71□□□□□ -0.54
TOP3A-217ENST00000584582 BST2Q10589 180 aaKnown RBP11.71□□□□□ -0.54
TOP3A-217ENST00000584582 DCAF4L1Q3SXM0 396 aa11.71□□□□□ -0.54
TOP3A-217ENST00000584582 MIB1Q86YT6 1006 aa11.71□□□□□ -0.54
TOP3A-217ENST00000584582 CCDC185Q8N715 623 aa11.71□□□□□ -0.54
TOP3A-217ENST00000584582 RMDN2Q96LZ7 410 aa11.71□□□□□ -0.54
TOP3A-217ENST00000584582 MANSC1Q9H8J5 431 aa11.71□□□□□ -0.54
TOP3A-217ENST00000584582 PLEKHA5Q9HAU0 1116 aa11.71□□□□□ -0.54
TOP3A-217ENST00000584582 EVPLQ92817 2033 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 LOC100653049A0A140TA62 436 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 SOCS7O14512 581 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 UGT1A9O60656 530 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 DIAPH2O60879 1101 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 PMPCBO75439 489 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 KRT34O76011 436 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 JCHAINP01591 159 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 ENO1P06733 434 aaKnown RBP11.7□□□□□ -0.54
TOP3A-217ENST00000584582 BRCC3P46736 316 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 OR1G1P47890 313 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 ATXN3P54252 364 aaPredicted RBP11.7□□□□□ -0.54
TOP3A-217ENST00000584582 COPS2P61201 443 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 CHI3L2Q15782 390 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 VSTM1Q6UX27 236 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 COLGALT1Q8NBJ5 622 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 TFB1MQ8WVM0 346 aaKnown RBP11.7□□□□□ -0.54
TOP3A-217ENST00000584582 SENP8Q96LD8 212 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 UGT1A7Q9HAW7 530 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 UGT1A10Q9HAW8 530 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 UGT1A8Q9HAW9 530 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 PCDH18Q9HCL0 1135 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 HEY2Q9UBP5 337 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 TCRBV9S1A1TA0A576 114 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 H3BRJ5 948 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 MGAT1P26572 445 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 YWHAZP63104 245 aaKnown RBP11.7□□□□□ -0.54
TOP3A-217ENST00000584582 SNX17Q15036 470 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 ZRSR2Q15696 482 aaKnown RBP11.7□□□□□ -0.54
TOP3A-217ENST00000584582 SV2CQ496J9 727 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 PLD5Q8N7P1 536 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 IPMKQ8NFU5 416 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 IGKV6D-21A0A0A0MT36 114 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 A8MUI8 341 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 NEMP1O14524 444 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 GYG2O15488 501 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 THP07101 528 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 GLRBP48167 497 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 EPHB1P54762 984 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 SLC12A2P55011 1212 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 POU5F1BQ06416 359 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 ARL13BQ3SXY8 428 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 C9orf57Q5W0N0 161 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 TAPT1Q6NXT6 567 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 CCNYL1Q8N7R7 359 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 PABPC5Q96DU9 382 aaKnown RBP11.7□□□□□ -0.54
TOP3A-217ENST00000584582 NMRK2Q9NPI5 230 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 ETNK2Q9NVF9 386 aa11.7□□□□□ -0.54
TOP3A-217ENST00000584582 A0A1B0GUA9 196 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 TOP3BO95985 862 aaKnown RBP11.69□□□□□ -0.54
TOP3A-217ENST00000584582 IVDP26440 423 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 FOXN2P32314 431 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 MAP2K2P36507 400 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 AVPR1AP37288 418 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 CPT1AP50416 773 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 PTP4A2Q12974 167 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 NR1H3Q13133 447 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 SOWAHAQ2M3V2 549 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 RNASEH2BQ5TBB1 312 aaKnown RBP11.69□□□□□ -0.54
TOP3A-217ENST00000584582 OLFML2BQ68BL8 750 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 PDZD4Q76G19 769 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-217ENST00000584582 RASSF3Q86WH2 238 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 SLC25A41Q8N5S1 370 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 MICAL1Q8TDZ2 1067 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 TMEM40Q8WWA1 233 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 C16orf70Q9BSU1 422 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 SMG5Q9UPR3 1016 aaKnown RBP11.69□□□□□ -0.54
TOP3A-217ENST00000584582 DNAH12Q6ZR08 3092 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 BNIP3LO60238 219 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 HAUS5O94927 633 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 ITGAVP06756 1048 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 OR4Q2P0C623 313 aa11.69□□□□□ -0.54
TOP3A-217ENST00000584582 DARSP14868 501 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms