RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 SMARCD1Q96GM5 515 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 SMOQ99835 787 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 VRTNQ9H8Y1 702 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 TMEM9BQ9NQ34 198 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 FAM49BQ9NUQ9 324 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 HCN2Q9UL51 889 aa16.54■□□□□ 0.24
SKA2-209ENST00000583976 ASCC3Q8N3C0 2202 aaKnown RBP16.54■□□□□ 0.24
SKA2-209ENST00000583976 ATP8B3O60423 1300 aa16.53■□□□□ 0.24
SKA2-209ENST00000583976 E2F8A0AVK6 867 aa16.53■□□□□ 0.24
SKA2-209ENST00000583976 HOXC11O43248 304 aaPredicted RBP16.53■□□□□ 0.24
SKA2-209ENST00000583976 TULP3O75386 442 aa16.53■□□□□ 0.24
SKA2-209ENST00000583976 RTN3O95197 1032 aaPredicted RBP16.53■□□□□ 0.24
SKA2-209ENST00000583976 LETM1O95202 739 aaPredicted RBP16.53■□□□□ 0.24
SKA2-209ENST00000583976 C4BPAP04003 597 aaKnown RBP16.53■□□□□ 0.24
SKA2-209ENST00000583976 ZDHHC11BP0C7U3 371 aa16.53■□□□□ 0.24
SKA2-209ENST00000583976 GRIA2P42262 883 aa16.53■□□□□ 0.24
SKA2-209ENST00000583976 WASP42768 502 aa16.53■□□□□ 0.24
SKA2-209ENST00000583976 MAPK8P45983 427 aa16.53■□□□□ 0.24
SKA2-209ENST00000583976 GCLMP48507 274 aa16.53■□□□□ 0.24
SKA2-209ENST00000583976 CLDN10P78369 228 aa16.53■□□□□ 0.24
SKA2-209ENST00000583976 PPP3CAQ08209 521 aa16.53■□□□□ 0.24
SKA2-209ENST00000583976 MAP7D1Q3KQU3 841 aa16.53■□□□□ 0.24
SKA2-209ENST00000583976 FOXR2Q6PJQ5 311 aa16.53■□□□□ 0.24
SKA2-209ENST00000583976 C11orf74Q86VG3 221 aa16.53■□□□□ 0.24
SKA2-209ENST00000583976 KIAA1958Q8N8K9 716 aa16.53■□□□□ 0.24
SKA2-209ENST00000583976 SLC2A14Q8TDB8 520 aa16.53■□□□□ 0.24
SKA2-209ENST00000583976 JAKMIP2Q96AA8 810 aa16.53■□□□□ 0.24
SKA2-209ENST00000583976 SPACA7Q96KW9 195 aa16.53■□□□□ 0.24
SKA2-209ENST00000583976 TMEM74BQ9NUR3 256 aa16.53■□□□□ 0.24
SKA2-209ENST00000583976 ARMCX3Q9UH62 379 aaPredicted RBP16.53■□□□□ 0.24
SKA2-209ENST00000583976 SH3BP1Q9Y3L3 701 aa16.53■□□□□ 0.24
SKA2-209ENST00000583976 ADAMTS9Q9P2N4 1935 aa16.53■□□□□ 0.24
SKA2-209ENST00000583976 PCDH15Q96QU1 1955 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 C1QTNF9BB2RNN3 333 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 IKBKBO14920 756 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 MDM4O15151 490 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 CYP26A1O43174 497 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 ALDH1A2O94788 518 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 FGFR1OPO95684 399 aaKnown RBP16.52■□□□□ 0.24
SKA2-209ENST00000583976 C1QTNF9P0C862 333 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 ASPAP45381 313 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 NDST1P52848 882 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 AP3M2P53677 418 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 ANO4Q32M45 955 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 UAP1L1Q3KQV9 507 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 HSP90AA4PQ58FG1 418 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 TRIM61Q5EBN2 209 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 EOGTQ5NDL2 527 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 C10orf76Q5T2E6 689 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 SV2AQ7L0J3 742 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 TMEM25Q86YD3 366 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 C12orf29Q8N999 325 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 TERB1Q8NA31 727 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 DEFB124Q8NES8 71 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 OVCA2Q8WZ82 227 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 TWNKQ96RR1 684 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 NACA2Q9H009 215 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 METTL14Q9HCE5 456 aaKnown RBP16.52■□□□□ 0.24
SKA2-209ENST00000583976 CD93Q9NPY3 652 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 OSER1Q9NX31 292 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 IL37Q9NZH6 218 aa16.52■□□□□ 0.24
SKA2-209ENST00000583976 CACNA1EQ15878 2313 aa16.52■□□□□ 0.23
SKA2-209ENST00000583976 GON4LQ3T8J9 2241 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 CEP192Q8TEP8 1941 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 FAM92AA1XBS5 289 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.51■□□□□ 0.23
SKA2-209ENST00000583976 TLR5O60602 858 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 GNA14O95837 355 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 TBX18O95935 607 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 FAM163BP0C2L3 166 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 GABRG2P18507 467 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 ADORA2BP29275 332 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 TUBP50607 506 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 MAP3K7CLP57077 242 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 GAD2Q05329 585 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 ANO6Q4KMQ2 910 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 CT47A1Q5JQC4 288 aaPredicted RBP16.51■□□□□ 0.23
SKA2-209ENST00000583976 SNX30Q5VWJ9 437 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 DAB2IPQ5VWQ8 1189 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 EGFLAMQ63HQ2 1017 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 KIAA1211LQ6NV74 962 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 LPCAT2Q7L5N7 544 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 PGBD3Q8N328 593 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 DEFB119Q8N690 84 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 ZNF513Q8N8E2 541 aaPredicted RBP16.51■□□□□ 0.23
SKA2-209ENST00000583976 P2RY11Q96G91 374 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 TNIP3Q96KP6 325 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 ACOX2Q99424 681 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 POLMQ9NP87 494 aaPredicted RBP16.51■□□□□ 0.23
SKA2-209ENST00000583976 SPHK2Q9NRA0 654 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 CALCOCO1Q9P1Z2 691 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 TBC1D14Q9P2M4 693 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 WASF3Q9UPY6 502 aa16.51■□□□□ 0.23
SKA2-209ENST00000583976 TBC1D3BA6NDS4 549 aa16.5■□□□□ 0.23
SKA2-209ENST00000583976 GREM1O60565 184 aa16.5■□□□□ 0.23
SKA2-209ENST00000583976 HOXB2P14652 356 aa16.5■□□□□ 0.23
SKA2-209ENST00000583976 ITPKAP23677 461 aa16.5■□□□□ 0.23
SKA2-209ENST00000583976 PIK3CAP42336 1068 aa16.5■□□□□ 0.23
SKA2-209ENST00000583976 PI4KAP42356 2102 aa16.5■□□□□ 0.23
SKA2-209ENST00000583976 ZSCAN23Q3MJ62 389 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms