RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877	ZDHHC11B	P0C7U3	371 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	TXLNA	P40222	546 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	WAS	P42768	502 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	TNNC1	P63316	161 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	GRIK2	Q13002	908 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	WDR45B	Q5MNZ6	344 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	LARP1B	Q659C4	914 aa	Known RBP	9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	TOGARAM2	Q6ZUX3	1019 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	HTR3D	Q70Z44	454 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	CBWD2	Q8IUF1	395 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	B3GALNT2	Q8NCR0	500 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	SCAMP5	Q8TAC9	235 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	DNASE2B	Q8WZ79	361 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	TMX3	Q96JJ7	454 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	MRGPRX1	Q96LB2	322 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	XPO6	Q96QU8	1125 aa	Known RBP	9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	ACOX2	Q99424	681 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	ARID3A	Q99856	593 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	CCSER2	Q9H7U1	834 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	PANK4	Q9NVE7	773 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	DNAJC17	Q9NVM6	304 aa	Known RBP	9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	COMMD8	Q9NX08	183 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	IL37	Q9NZH6	218 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	WDR35	Q9P2L0	1181 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	DKK4	Q9UBT3	224 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	CHORDC1	Q9UHD1	332 aa	Predicted RBP	9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	PCOLCE2	Q9UKZ9	415 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	NFE2L3	Q9Y4A8	694 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	SRPRB	Q9Y5M8	271 aa	Known RBP	9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	ATP8B3	O60423	1300 aa		9.25	□□□□□ -0.93
NUP85-223	ENST00000583877	MUC22	E2RYF6	1773 aa	Predicted RBP	9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	DOCK9	Q9BZ29	2069 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877		A0A1B0GTW7	788 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	FAM92A	A1XBS5	289 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877		A8MXQ7	604 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	NEDD8-MDP1	E9PL57	170 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	CLSTN1	O94985	981 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	STAU1	O95793	577 aa	Known RBP	9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	ZNF883	P0CG24	379 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	IRF1	P10914	325 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	TYR	P14679	529 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	CD6	P30203	668 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	SLC5A3	P53794	718 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	RABEP1	Q15276	862 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	WDR72	Q3MJ13	1102 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	CCDC73	Q6ZRK6	1079 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	STXBP4	Q6ZWJ1	553 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	SLCO6A1	Q86UG4	719 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	CCDC65	Q8IXS2	484 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	MDM1	Q8TC05	714 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	SCFD1	Q8WVM8	642 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	WBP2	Q969T9	261 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	POM121	Q96HA1	1249 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	KCNK16	Q96T55	309 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	BBS2	Q9BXC9	721 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	NACA2	Q9H009	215 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	DMAP1	Q9NPF5	467 aa	Predicted RBP	9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	CD93	Q9NPY3	652 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	PPP4R2	Q9NY27	417 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	HSPBP1	Q9NZL4	362 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	MARK1	Q9P0L2	795 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	GMIP	Q9P107	970 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	FBXO2	Q9UK22	296 aa	Predicted RBP	9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	SMC3	Q9UQE7	1217 aa		9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	COL5A1	P20908	1838 aa	Predicted RBP	9.24	□□□□□ -0.93
NUP85-223	ENST00000583877	MAST4	O15021	2626 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	MEI4	A8MW99	385 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	PRRT4	C9JH25	899 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	GREM1	O60565	184 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	TLR5	O60602	858 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	DKK1	O94907	266 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	CER1	O95813	267 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	DLAT	P10515	647 aa	Known RBP	9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	TNNI1	P19237	187 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	MAOB	P27338	520 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	STAT6	P42226	847 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	ZNF132	P52740	706 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	PSMD6	Q15008	389 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	SNRNP35	Q16560	246 aa	Known RBP	9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	IL27RA	Q6UWB1	636 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	KIAA1324	Q6UXG2	1013 aa	Known RBP	9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	TMPRSS7	Q7RTY8	843 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	FAM35A	Q86V20	835 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	CADM4	Q8NFZ8	388 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	BAHD1	Q8TBE0	780 aa	Predicted RBP	9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	SETD7	Q8WTS6	366 aa	Known RBP	9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	HNRNPLL	Q8WVV9	542 aa	Known RBP	9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	ERLEC1	Q96DZ1	483 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	SMARCD1	Q96GM5	515 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	CLIC6	Q96NY7	704 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	CGRRF1	Q99675	332 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	MED10	Q9BTT4	135 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	KLF16	Q9BXK1	252 aa	Predicted RBP	9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	SLC4A5	Q9BY07	1137 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	SLC6A17	Q9H1V8	727 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	FBXO44	Q9H4M3	255 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	TLR8	Q9NR97	1041 aa	Known RBP	9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	CACNA2D2	Q9NY47	1150 aa		9.23	□□□□□ -0.93
NUP85-223	ENST00000583877	WSB2	Q9NYS7	404 aa	Predicted RBP	9.23	□□□□□ -0.93

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