RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 ABCC13Q9NSE7 274 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 OSER1Q9NX31 292 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 CLIC5Q9NZA1 410 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 LCMT1Q9UIC8 334 aa17.1■□□□□ 0.33
CDK5RAP3-228ENST00000583363 GRID2IPA4D2P6 1211 aa17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 ZNF840PA6NDX5 716 aa17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 DPYSL4O14531 572 aa17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 KIF5CO60282 957 aa17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 XYLBO75191 536 aa17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 PALMO75781 387 aa17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 PROSCO94903 275 aa17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 LTBRP36941 435 aa17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 ZP2Q05996 745 aa17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 ZNF252P-AS1Q0IIN9 211 aa17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 PIGHQ14442 188 aaPredicted RBP17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 DCAF6Q58WW2 860 aa17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 TMEM150AQ86TG1 271 aa17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 TMC8Q8IU68 726 aa17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 LRRC57Q8N9N7 239 aa17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 CMASQ8NFW8 434 aaPredicted RBP17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 EDEM1Q92611 657 aa17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 NT5C3BQ969T7 300 aa17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 ZNF707Q96C28 371 aaPredicted RBP17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 CNPY3Q9BT09 278 aa17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 DZANK1Q9NVP4 752 aa17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 CLDND1Q9NY35 253 aa17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 TRPM5Q9NZQ8 1165 aa17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 DNMT3BQ9UBC3 853 aaKnown RBP17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 ALG6Q9Y672 507 aa17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 CAPN6Q9Y6Q1 641 aa17.09■□□□□ 0.33
CDK5RAP3-228ENST00000583363 ESPNB1AK53 854 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 CAPN9O14815 690 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 LINC01565O15544 149 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 DCXO43602 365 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 GLP2RO95838 553 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 RALAP11233 206 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 NCAM1P13591 858 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 RARGP13631 454 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 PSMA2P25787 234 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 SDC4P31431 198 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 PTPN9P43378 593 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 EPHA5P54756 1037 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 ACAP1Q15027 740 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 SLC25A52Q3SY17 297 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 PABPC1LQ4VXU2 614 aaKnown RBP17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 ZNF569Q5MCW4 686 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 C11orf63Q6NUN7 778 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 NYAP1Q6ZVC0 841 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 ALYREFQ86V81 257 aaKnown RBP17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 C12orf76Q8N812 135 aaPredicted RBP17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 NIPA2Q8N8Q9 360 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 CENPIQ92674 756 aaPredicted RBP17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 CFAP57Q96MR6 1250 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 NPY6RQ99463 290 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 CORO1BQ9BR76 489 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 RRN3Q9NYV6 651 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 WDFY4Q6ZS81 3184 aa17.08■□□□□ 0.32
CDK5RAP3-228ENST00000583363 C19orf67A6NJJ6 358 aa17.07■□□□□ 0.32
CDK5RAP3-228ENST00000583363 TMEM110-MUSTN1A8MSY1 372 aa17.07■□□□□ 0.32
CDK5RAP3-228ENST00000583363 NCK2O43639 380 aa17.07■□□□□ 0.32
CDK5RAP3-228ENST00000583363 TADA3O75528 432 aa17.07■□□□□ 0.32
CDK5RAP3-228ENST00000583363 ENDOD1O94919 500 aa17.07■□□□□ 0.32
CDK5RAP3-228ENST00000583363 MAN1A1P33908 653 aa17.07■□□□□ 0.32
CDK5RAP3-228ENST00000583363 SLC1A1P43005 524 aa17.07■□□□□ 0.32
CDK5RAP3-228ENST00000583363 C15orf59Q2T9L4 293 aaPredicted RBP17.07■□□□□ 0.32
CDK5RAP3-228ENST00000583363 ANKRD54Q6NXT1 300 aa17.07■□□□□ 0.32
CDK5RAP3-228ENST00000583363 GAREM2Q75VX8 874 aa17.07■□□□□ 0.32
CDK5RAP3-228ENST00000583363 BNIPLQ7Z465 357 aa17.07■□□□□ 0.32
CDK5RAP3-228ENST00000583363 DAAM2Q86T65 1068 aa17.07■□□□□ 0.32
CDK5RAP3-228ENST00000583363 SYCE1Q8N0S2 351 aa17.07■□□□□ 0.32
CDK5RAP3-228ENST00000583363 ARFGAP1Q8N6T3 406 aa17.07■□□□□ 0.32
CDK5RAP3-228ENST00000583363 TRIM58Q8NG06 486 aa17.07■□□□□ 0.32
CDK5RAP3-228ENST00000583363 SFXN1Q9H9B4 322 aa17.07■□□□□ 0.32
CDK5RAP3-228ENST00000583363 ASAH2Q9NR71 780 aa17.07■□□□□ 0.32
CDK5RAP3-228ENST00000583363 HCFC1R1Q9NWW0 138 aa17.07■□□□□ 0.32
CDK5RAP3-228ENST00000583363 PRKAG3Q9UGI9 489 aa17.07■□□□□ 0.32
CDK5RAP3-228ENST00000583363 STAP1Q9ULZ2 295 aa17.07■□□□□ 0.32
CDK5RAP3-228ENST00000583363 SPDYE4A6NLX3 237 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 FGF19O95750 216 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 RHOP08100 348 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 SRGAP2BP0DMP2 458 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 MYL4P12829 197 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 TFE3P19532 575 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 COMTP21964 271 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 GABRR2P28476 465 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 GNG11P61952 73 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 PITX1P78337 314 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 DLX2Q07687 328 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 CTC1Q2NKJ3 1217 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 HECTD3Q5T447 861 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 SH3PXD2AQ5TCZ1 1133 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 CC2D1AQ6P1N0 951 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 MSANTD2Q6P1R3 559 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 SYCE2Q6PIF2 218 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 CPNE8Q86YQ8 564 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 ADHFE1Q8IWW8 467 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 SLC35F6Q8N357 371 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 LEMD2Q8NC56 503 aa17.06■□□□□ 0.32
CDK5RAP3-228ENST00000583363 RNF139Q8WU17 664 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms