RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 CISD3P0C7P0 127 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 ZDHHC11BP0C7U3 371 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 OXTRP30559 389 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 GOLGA8FQ08AF8 430 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 GOLGA8DPQ0D2H9 430 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 C19orf57Q0VDD7 668 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 FUT11Q495W5 492 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 STXBP4Q6ZWJ1 553 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 BRAPQ7Z569 592 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 FAM35AQ86V20 835 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 SCUBE3Q8IX30 993 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 CCDC65Q8IXS2 484 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 ADAM32Q8TC27 787 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 BHMTQ93088 406 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 KLF16Q9BXK1 252 aaPredicted RBP13□□□□□ -0.33
TOP3A-215ENST00000583328 PANK2Q9BZ23 570 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 TRIM9Q9C026 710 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 DMAP1Q9NPF5 467 aaPredicted RBP13□□□□□ -0.33
TOP3A-215ENST00000583328 TOR4AQ9NXH8 423 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 MARK1Q9P0L2 795 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 USP36Q9P275 1121 aaKnown RBP13□□□□□ -0.33
TOP3A-215ENST00000583328 MTMR6Q9Y217 621 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 PCDHGB2Q9Y5G2 931 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 LAMA5O15230 3695 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 FRMD3A2A2Y4 597 aa12.99□□□□□ -0.33
TOP3A-215ENST00000583328 FLRT2O43155 660 aa12.99□□□□□ -0.33
TOP3A-215ENST00000583328 SYNCRIPO60506 623 aaKnown RBP12.99□□□□□ -0.33
TOP3A-215ENST00000583328 GREM1O60565 184 aa12.99□□□□□ -0.33
TOP3A-215ENST00000583328 AP1G2O75843 785 aa12.99□□□□□ -0.33
TOP3A-215ENST00000583328 CLSTN1O94985 981 aa12.99□□□□□ -0.33
TOP3A-215ENST00000583328 ATP5C1P36542 298 aaKnown RBP12.99□□□□□ -0.33
TOP3A-215ENST00000583328 MYL6P60660 151 aa12.99□□□□□ -0.33
TOP3A-215ENST00000583328 BNC1Q01954 994 aa12.99□□□□□ -0.33
TOP3A-215ENST00000583328 CCDC157Q569K6 752 aa12.99□□□□□ -0.33
TOP3A-215ENST00000583328 DBX2Q6ZNG2 339 aa12.99□□□□□ -0.33
TOP3A-215ENST00000583328 CCDC73Q6ZRK6 1079 aa12.99□□□□□ -0.33
TOP3A-215ENST00000583328 TMPRSS6Q8IU80 811 aa12.99□□□□□ -0.33
TOP3A-215ENST00000583328 CCDC127Q96BQ5 260 aa12.99□□□□□ -0.33
TOP3A-215ENST00000583328 SIPA1Q96FS4 1042 aa12.99□□□□□ -0.33
TOP3A-215ENST00000583328 SMARCD1Q96GM5 515 aa12.99□□□□□ -0.33
TOP3A-215ENST00000583328 CRELD1Q96HD1 420 aa12.99□□□□□ -0.33
TOP3A-215ENST00000583328 CLIC6Q96NY7 704 aa12.99□□□□□ -0.33
TOP3A-215ENST00000583328 CGRRF1Q99675 332 aa12.99□□□□□ -0.33
TOP3A-215ENST00000583328 FBXO44Q9H4M3 255 aa12.99□□□□□ -0.33
TOP3A-215ENST00000583328 TLR8Q9NR97 1041 aaKnown RBP12.99□□□□□ -0.33
TOP3A-215ENST00000583328 PLK2Q9NYY3 685 aa12.99□□□□□ -0.33
TOP3A-215ENST00000583328 EIF2B4Q9UI10 523 aaKnown RBP12.99□□□□□ -0.33
TOP3A-215ENST00000583328 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.99□□□□□ -0.33
TOP3A-215ENST00000583328 FREM2Q5SZK8 3169 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 PLXNB3Q9ULL4 1909 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 NBEAQ8NFP9 2946 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 A0A087WV48 116 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 A0A1B0GVT2 93 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 FAM92AA1XBS5 289 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 FAM149AA5PLN7 773 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 KCNJ18B7U540 433 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 PHACTR2O75167 634 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 DKK1O94907 266 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 ACADMP11310 421 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 ATICP31939 592 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 STAT6P42226 847 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 PGFP49763 221 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 TPMTP51580 245 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 CDH8P55286 799 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 PSMD6Q15008 389 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 SNRNP35Q16560 246 aaKnown RBP12.98□□□□□ -0.33
TOP3A-215ENST00000583328 PAQR9Q6ZVX9 377 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 PDCD7Q8N8D1 485 aaKnown RBP12.98□□□□□ -0.33
TOP3A-215ENST00000583328 BAHD1Q8TBE0 780 aaPredicted RBP12.98□□□□□ -0.33
TOP3A-215ENST00000583328 UCMAQ8WVF2 138 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 PRCCQ92733 491 aaPredicted RBP12.98□□□□□ -0.33
TOP3A-215ENST00000583328 SYAP1Q96A49 352 aaPredicted RBP12.98□□□□□ -0.33
TOP3A-215ENST00000583328 TNIP3Q96KP6 325 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 DCBLD2Q96PD2 775 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 UBL7Q96S82 380 aaPredicted RBP12.98□□□□□ -0.33
TOP3A-215ENST00000583328 NUP58Q9BVL2 599 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 MKRN2Q9H000 416 aaKnown RBP12.98□□□□□ -0.33
TOP3A-215ENST00000583328 SMYD3Q9H7B4 428 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 SRPRBQ9Y5M8 271 aaKnown RBP12.98□□□□□ -0.33
TOP3A-215ENST00000583328 CLIC4Q9Y696 253 aa12.98□□□□□ -0.33
TOP3A-215ENST00000583328 GOLGA4Q13439 2230 aaKnown RBP12.97□□□□□ -0.33
TOP3A-215ENST00000583328 ITPR1Q14643 2758 aa12.97□□□□□ -0.33
TOP3A-215ENST00000583328 NPC1O15118 1278 aa12.97□□□□□ -0.33
TOP3A-215ENST00000583328 TNFSF14O43557 240 aa12.97□□□□□ -0.33
TOP3A-215ENST00000583328 STAU1O95793 577 aaKnown RBP12.97□□□□□ -0.33
TOP3A-215ENST00000583328 PRB1P04280 392 aa12.97□□□□□ -0.33
TOP3A-215ENST00000583328 IL12RB1P42701 662 aa12.97□□□□□ -0.33
TOP3A-215ENST00000583328 ABCG1P45844 678 aa12.97□□□□□ -0.33
TOP3A-215ENST00000583328 CSNK1EP49674 416 aaKnown RBP12.97□□□□□ -0.33
TOP3A-215ENST00000583328 ZNF132P52740 706 aa12.97□□□□□ -0.33
TOP3A-215ENST00000583328 CYP24A1Q07973 514 aa12.97□□□□□ -0.33
TOP3A-215ENST00000583328 CAMK2BQ13554 666 aa12.97□□□□□ -0.33
TOP3A-215ENST00000583328 ENGASEQ8NFI3 743 aa12.97□□□□□ -0.33
TOP3A-215ENST00000583328 SNX19Q92543 992 aa12.97□□□□□ -0.33
TOP3A-215ENST00000583328 HPS3Q969F9 1004 aa12.97□□□□□ -0.33
TOP3A-215ENST00000583328 SMOQ99835 787 aa12.97□□□□□ -0.33
TOP3A-215ENST00000583328 ZSCAN16Q9H4T2 348 aaPredicted RBP12.97□□□□□ -0.33
TOP3A-215ENST00000583328 KRT82Q9NSB4 513 aa12.97□□□□□ -0.33
TOP3A-215ENST00000583328 THAP10Q9P2Z0 257 aaPredicted RBP12.97□□□□□ -0.33
TOP3A-215ENST00000583328 FBXO2Q9UK22 296 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms