RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 ME1P48163 572 aa14.33□□□□□ -0.12
SS18-222ENST00000582792 EHHADHQ08426 723 aa14.33□□□□□ -0.12
SS18-222ENST00000582792 ZNF699Q32M78 642 aa14.33□□□□□ -0.12
SS18-222ENST00000582792 ZNF667Q5HYK9 610 aa14.33□□□□□ -0.12
SS18-222ENST00000582792 SCARA5Q6ZMJ2 495 aa14.33□□□□□ -0.12
SS18-222ENST00000582792 C12orf56Q8IXR9 622 aa14.33□□□□□ -0.12
SS18-222ENST00000582792 DHX58Q96C10 678 aa14.33□□□□□ -0.12
SS18-222ENST00000582792 ZNF419Q96HQ0 510 aaPredicted RBP14.33□□□□□ -0.12
SS18-222ENST00000582792 SMOQ99835 787 aa14.33□□□□□ -0.12
SS18-222ENST00000582792 KLF16Q9BXK1 252 aaPredicted RBP14.33□□□□□ -0.12
SS18-222ENST00000582792 SDCBP2Q9H190 292 aa14.33□□□□□ -0.12
SS18-222ENST00000582792 FBXO44Q9H4M3 255 aa14.33□□□□□ -0.12
SS18-222ENST00000582792 FAM124BQ9H5Z6 455 aaPredicted RBP14.33□□□□□ -0.12
SS18-222ENST00000582792 CSNK1G1Q9HCP0 422 aa14.33□□□□□ -0.12
SS18-222ENST00000582792 TLR8Q9NR97 1041 aaKnown RBP14.33□□□□□ -0.12
SS18-222ENST00000582792 WDR35Q9P2L0 1181 aa14.33□□□□□ -0.12
SS18-222ENST00000582792 CGNQ9P2M7 1197 aaKnown RBP14.33□□□□□ -0.12
SS18-222ENST00000582792 SUSD2Q9UGT4 822 aa14.33□□□□□ -0.12
SS18-222ENST00000582792 A0A1W2PQ27 194 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 A0A1W2PQ64 194 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 GFRA2O00451 464 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 SH3BP5O60239 455 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 NDUFS2O75306 463 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 BEST1O76090 585 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 TBX18O95935 607 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 CMA1P23946 247 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 CASP4P49662 377 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 AP3M2P53677 418 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 BIRC3Q13489 604 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 NCOA4Q13772 614 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 TRIP6Q15654 476 aaKnown RBP14.32□□□□□ -0.12
SS18-222ENST00000582792 BMT2Q1RMZ1 405 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 PLEKHG6Q3KR16 790 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 SYCP2LQ5T4T6 812 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 RESP18Q5W5W9 173 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 SHC4Q6S5L8 630 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 TOGARAM2Q6ZUX3 1019 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 UNC13DQ70J99 1090 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 ACOT1Q86TX2 421 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 PROSER1Q86XN7 944 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 RGL4Q8IZJ4 473 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 IQUBQ8NA54 791 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 PLEKHO2Q8TD55 490 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 FOXJ1Q92949 421 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 ERLEC1Q96DZ1 483 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 MRGPRX1Q96LB2 322 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 CAMK1GQ96NX5 476 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 C7orf25Q9BPX7 421 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 CD93Q9NPY3 652 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 CYLDQ9NQC7 956 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 FAM13BQ9NYF5 915 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 LSM7Q9UK45 103 aaKnown RBP14.32□□□□□ -0.12
SS18-222ENST00000582792 RAD54BQ9Y620 910 aa14.32□□□□□ -0.12
SS18-222ENST00000582792 IGSF10Q6WRI0 2623 aa14.31□□□□□ -0.12
SS18-222ENST00000582792 FAM237AA0A1B0GTK4 181 aa14.31□□□□□ -0.12
SS18-222ENST00000582792 LRRIQ3A6PVS8 624 aaPredicted RBP14.31□□□□□ -0.12
SS18-222ENST00000582792 EXOC3O60645 756 aa14.31□□□□□ -0.12
SS18-222ENST00000582792 CLSTN1O94985 981 aa14.31□□□□□ -0.12
SS18-222ENST00000582792 CISD3P0C7P0 127 aa14.31□□□□□ -0.12
SS18-222ENST00000582792 CCDC130P13994 396 aa14.31□□□□□ -0.12
SS18-222ENST00000582792 GNSP15586 552 aa14.31□□□□□ -0.12
SS18-222ENST00000582792 ATP5C1P36542 298 aaKnown RBP14.31□□□□□ -0.12
SS18-222ENST00000582792 DGKGP49619 791 aa14.31□□□□□ -0.12
SS18-222ENST00000582792 MAP3K7CLP57077 242 aa14.31□□□□□ -0.12
SS18-222ENST00000582792 CLDN10P78369 228 aa14.31□□□□□ -0.12
SS18-222ENST00000582792 GOLGA8FQ08AF8 430 aa14.31□□□□□ -0.12
SS18-222ENST00000582792 GOLGA8DPQ0D2H9 430 aa14.31□□□□□ -0.12
SS18-222ENST00000582792 CLEC17AQ6ZS10 378 aa14.31□□□□□ -0.12
SS18-222ENST00000582792 TPGS1Q6ZTW0 290 aa14.31□□□□□ -0.12
SS18-222ENST00000582792 NAXDQ8IW45 347 aa14.31□□□□□ -0.12
SS18-222ENST00000582792 CRYBG2Q8N1P7 616 aa14.31□□□□□ -0.12
SS18-222ENST00000582792 SLC2A14Q8TDB8 520 aa14.31□□□□□ -0.12
SS18-222ENST00000582792 PARD3BQ8TEW8 1205 aa14.31□□□□□ -0.12
SS18-222ENST00000582792 ELMO3Q96BJ8 720 aa14.31□□□□□ -0.12
SS18-222ENST00000582792 SLC6A17Q9H1V8 727 aa14.31□□□□□ -0.12
SS18-222ENST00000582792 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.31□□□□□ -0.123e-16■■■■■ 317.3
SS18-222ENST00000582792 CACNA2D2Q9NY47 1150 aa14.31□□□□□ -0.12
SS18-222ENST00000582792 VNN1O95497 513 aa14.3□□□□□ -0.12
SS18-222ENST00000582792 C4BPAP04003 597 aaKnown RBP14.3□□□□□ -0.12
SS18-222ENST00000582792 P4HA1P13674 534 aa14.3□□□□□ -0.12
SS18-222ENST00000582792 NDST1P52848 882 aa14.3□□□□□ -0.12
SS18-222ENST00000582792 KNOP1Q1ED39 458 aaKnown RBP14.3□□□□□ -0.12
SS18-222ENST00000582792 WDR45BQ5MNZ6 344 aa14.3□□□□□ -0.12
SS18-222ENST00000582792 KIAA1324Q6UXG2 1013 aaKnown RBP14.3□□□□□ -0.12
SS18-222ENST00000582792 METTL3Q86U44 580 aaKnown RBP14.3□□□□□ -0.12
SS18-222ENST00000582792 UNC93AQ86WB7 457 aa14.3□□□□□ -0.12
SS18-222ENST00000582792 ADAMTS14Q8WXS8 1223 aa14.3□□□□□ -0.12
SS18-222ENST00000582792 ZDHHC5Q9C0B5 715 aa14.3□□□□□ -0.12
SS18-222ENST00000582792 MAGEF1Q9HAY2 307 aa14.3□□□□□ -0.12
SS18-222ENST00000582792 SLC39A2Q9NP94 309 aa14.3□□□□□ -0.12
SS18-222ENST00000582792 OSER1Q9NX31 292 aa14.3□□□□□ -0.12
SS18-222ENST00000582792 HMGXB4Q9UGU5 601 aa14.3□□□□□ -0.12
SS18-222ENST00000582792 SCML2Q9UQR0 700 aa14.3□□□□□ -0.12
SS18-222ENST00000582792 PCDHB9Q9Y5E1 797 aa14.3□□□□□ -0.12
SS18-222ENST00000582792 MYH10P35580 1976 aa14.3□□□□□ -0.12
SS18-222ENST00000582792 WASH3PC4AMC7 463 aa14.29□□□□□ -0.12
SS18-222ENST00000582792 CYP26A1O43174 497 aa14.29□□□□□ -0.12
SS18-222ENST00000582792 FTH1P19P0C7X4 201 aa14.29□□□□□ -0.12
SS18-222ENST00000582792 FAM200BP0CF97 657 aa14.29□□□□□ -0.12
SS18-222ENST00000582792 MAOBP27338 520 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms