RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	SMURF2	Q9HAU4	748 aa		3.78	□□□□□ -1.8
MSI2-215	ENST00000582453	PTPRH	Q9HD43	1115 aa		3.78	□□□□□ -1.8
MSI2-215	ENST00000582453	SEMA4G	Q9NTN9	838 aa		3.78	□□□□□ -1.8
MSI2-215	ENST00000582453	TPCN1	Q9ULQ1	816 aa		3.78	□□□□□ -1.8
MSI2-215	ENST00000582453	COX11	Q9Y6N1	276 aa		3.78	□□□□□ -1.8
MSI2-215	ENST00000582453	RGPD1	P0DJD0	1748 aa		3.78	□□□□□ -1.8
MSI2-215	ENST00000582453	PCDH11X	Q9BZA7	1347 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	PCDH11Y	Q9BZA8	1340 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	MEGF6	O75095	1541 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	LINC00473	A8K010	186 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	EXOC5	O00471	708 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	TBX3	O15119	743 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	PPM1D	O15297	605 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	SLC16A3	O15427	465 aa	Known RBP	3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	HTATSF1	O43719	755 aa	Known RBP	3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	TTLL1	O95922	423 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	HSP90AB1	P08238	724 aa	Known RBP	3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	ZFX	P17010	805 aa	Predicted RBP	3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	WT1	P19544	449 aa	Predicted RBP	3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	HMGB2	P26583	209 aa	Known RBP	3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	AK2	P54819	239 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	CTBP1	Q13363	440 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	E2F2	Q14209	437 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	KRT72	Q14CN4	511 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	POLD3	Q15054	466 aa	Predicted RBP	3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	MGAT5B	Q3V5L5	792 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	PLEKHO1	Q53GL0	409 aa	Predicted RBP	3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	ARHGAP40	Q5TG30	622 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	RNF220	Q5VTB9	566 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	XRRA1	Q6P2D8	792 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	FBXO42	Q6P3S6	717 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	DARS2	Q6PI48	645 aa	Known RBP	3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	CCDC149	Q6ZUS6	474 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	KRT27	Q7Z3Y8	459 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	FAM98A	Q8NCA5	519 aa	Known RBP	3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	PNISR	Q8TF01	805 aa	Known RBP	3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	LRTOMT	Q8WZ04	291 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	LRRC27	Q9C0I9	530 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	R3HDML	Q9H3Y0	253 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	A1CF	Q9NQ94	594 aa	Known RBP	3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	SERHL	Q9NQF3	203 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	ZSCAN32	Q9NX65	697 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	FNIP2	Q9P278	1114 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	SERTAD3	Q9UJW9	196 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	NDRG4	Q9ULP0	352 aa	Known RBP	3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	SH2B3	Q9UQQ2	575 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	SSX2IP	Q9Y2D8	614 aa		3.77	□□□□□ -1.81
MSI2-215	ENST00000582453	PARP4	Q9UKK3	1724 aa	Known RBP	3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	ABHD14A-ACY1	A0A1B0GW23	586 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	TRIM43B	A6NCK2	446 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	OVOL3	O00110	214 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	GOLIM4	O00461	696 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	MGEA5	O60502	916 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	PROP1	O75360	226 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	ONECUT2	O95948	504 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	ELFN1	P0C7U0	828 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	NR2F6	P10588	404 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	BRAF	P15056	766 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	PEX2	P28328	305 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	PTH2R	P49190	550 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	KRT17	Q04695	432 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	MYO1E	Q12965	1108 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	EIF2B5	Q13144	721 aa	Known RBP	3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	KIAA0753	Q2KHM9	967 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	SULT6B1	Q6IMI4	303 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	RGS7BP	Q6MZT1	257 aa	Predicted RBP	3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	ZNF551	Q7Z340	670 aa	Predicted RBP	3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	RD3	Q7Z3Z2	195 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	MPP5	Q8N3R9	675 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	BOLL	Q8N9W6	283 aa	Known RBP	3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	PARD3B	Q8TEW8	1205 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	MAML1	Q92585	1016 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	TRIM43	Q96BQ3	446 aa	Predicted RBP	3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	NMD3	Q96D46	503 aa	Known RBP	3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	APIP	Q96GX9	242 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	SGCZ	Q96LD1	299 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	BBC3	Q96PG8	261 aa	Predicted RBP	3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	PLEKHF1	Q96S99	279 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	MS4A7	Q9GZW8	240 aa	Predicted RBP	3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	KLK15	Q9H2R5	256 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	NLRC4	Q9NPP4	1024 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	SERTAD4	Q9NUC0	356 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	DKK3	Q9UBP4	350 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	DAAM1	Q9Y4D1	1078 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	PCDHGB6	Q9Y5F9	930 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	LRRC37A3	O60309	1634 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	CEMIP	Q8WUJ3	1361 aa		3.76	□□□□□ -1.81
MSI2-215	ENST00000582453	MRC1	P22897	1456 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	MBD3L4	A6NDZ8	208 aa	Predicted RBP	3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	MBD3L3	A6NE82	208 aa	Predicted RBP	3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	ERVV-2	B6SEH9	535 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	RASA4B	C9J798	803 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	RASA4	O43374	803 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	C1QL1	O75973	258 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	IGLV2-14	P01704	120 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	PDHA1	P08559	390 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	MYL3	P08590	195 aa		3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	IL6R	P08887	468 aa	Predicted RBP	3.75	□□□□□ -1.81
MSI2-215	ENST00000582453	MYF5	P13349	255 aa		3.75	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms