RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 ACSF2Q96CM8 615 aaPredicted RBP9.68□□□□□ -0.86
SS18-220ENST00000582092 CRTAC1Q9NQ79 661 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 CHST7Q9NS84 486 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.68□□□□□ -0.86
SS18-220ENST00000582092 RRN3Q9NYV6 651 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 WHRNQ9P202 907 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 FAN1Q9Y2M0 1017 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 MYO7AQ13402 2215 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 TCF20Q9UGU0 1960 aaKnown RBP9.67□□□□□ -0.86
SS18-220ENST00000582092 SYNJ2BP-COX16A0A087WUM0 186 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 MYBPHLA2RUH7 354 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 H7C0C1 242 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 H7C4K7 107 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 M0QZQ0 153 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 APOL1O14791 398 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 INPPL1O15357 1258 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 LIASO43766 372 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 DAB1O75553 588 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 IFNB1P01574 187 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 FAM153BP0C7A2 387 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 TCF4P15884 667 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 LAG3P18627 525 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 FLT3P36888 993 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 GGCXP38435 758 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 HSPA9P38646 679 aaKnown RBP9.67□□□□□ -0.86
SS18-220ENST00000582092 GRIK1P39086 918 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 ATP5OP48047 213 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 AARSP49588 968 aaKnown RBP eCLIP9.67□□□□□ -0.86
SS18-220ENST00000582092 VPS41P49754 854 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 AFF1P51825 1210 aaKnown RBP9.67□□□□□ -0.86
SS18-220ENST00000582092 EIF3EP60228 445 aaKnown RBP9.67□□□□□ -0.86
SS18-220ENST00000582092 DEUP1Q05D60 604 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 ELAVL2Q12926 359 aaKnown RBP9.67□□□□□ -0.86
SS18-220ENST00000582092 PTK6Q13882 451 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 SIX1Q15475 284 aaPredicted RBP9.67□□□□□ -0.86
SS18-220ENST00000582092 TRIP13Q15645 432 aaPredicted RBP9.67□□□□□ -0.86
SS18-220ENST00000582092 FAM153CQ494X1 144 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 PPP6R3Q5H9R7 873 aaPredicted RBP9.67□□□□□ -0.86
SS18-220ENST00000582092 DENND2CQ68D51 928 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 TTC27Q6P3X3 843 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 DRICH1Q6PGQ1 229 aaPredicted RBP9.67□□□□□ -0.86
SS18-220ENST00000582092 DARS2Q6PI48 645 aaKnown RBP9.67□□□□□ -0.86
SS18-220ENST00000582092 CLEC20AQ6ZU45 233 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 BBS12Q6ZW61 710 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 PDZD4Q76G19 769 aaPredicted RBP9.67□□□□□ -0.86
SS18-220ENST00000582092 BZW1Q7L1Q6 419 aaKnown RBP9.67□□□□□ -0.86
SS18-220ENST00000582092 STRADAQ7RTN6 431 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 CCDC25Q86WR0 208 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 CEP57Q86XR8 500 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 DEFB106AQ8N104 65 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 LRRC43Q8N309 656 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 SEC14L1Q92503 715 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 RNF34Q969K3 372 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 MYLPFQ96A32 169 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 PCED1BQ96HM7 432 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 DDX23Q9BUQ8 820 aaKnown RBP9.67□□□□□ -0.86
SS18-220ENST00000582092 CENPHQ9H3R5 247 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 DHX35Q9H5Z1 703 aaKnown RBP9.67□□□□□ -0.86
SS18-220ENST00000582092 NSUN3Q9H649 340 aaKnown RBP9.67□□□□□ -0.86
SS18-220ENST00000582092 PRDM16Q9HAZ2 1276 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 RC3H2Q9HBD1 1191 aaKnown RBP9.67□□□□□ -0.86
SS18-220ENST00000582092 POPDC2Q9HBU9 364 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 DMAP1Q9NPF5 467 aaPredicted RBP9.67□□□□□ -0.86
SS18-220ENST00000582092 CNGB3Q9NQW8 809 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 TBC1D13Q9NVG8 400 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 COX16Q9P0S2 106 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 FAM153AQ9UHL3 310 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 ATP8A1Q9Y2Q0 1164 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 PRG3Q9Y2Y8 225 aaPredicted RBP9.67□□□□□ -0.86
SS18-220ENST00000582092 NME7Q9Y5B8 376 aa9.67□□□□□ -0.86
SS18-220ENST00000582092 TDRD15B5MCY1 1934 aaKnown RBP9.66□□□□□ -0.86
SS18-220ENST00000582092 H3BRJ5 948 aa9.66□□□□□ -0.86
SS18-220ENST00000582092 M0QYT0 321 aa9.66□□□□□ -0.86
SS18-220ENST00000582092 SYN3O14994 580 aa9.66□□□□□ -0.86
SS18-220ENST00000582092 ZBED1O96006 694 aa9.66□□□□□ -0.86
SS18-220ENST00000582092 F9P00740 461 aa9.66□□□□□ -0.86
SS18-220ENST00000582092 LTFP02788 710 aa9.66□□□□□ -0.86
SS18-220ENST00000582092 ITGAVP06756 1048 aa9.66□□□□□ -0.86
SS18-220ENST00000582092 MYZAPP0CAP1 466 aa9.66□□□□□ -0.86
SS18-220ENST00000582092 BDNFP23560 247 aa9.66□□□□□ -0.86
SS18-220ENST00000582092 IL1R2P27930 398 aa9.66□□□□□ -0.86
SS18-220ENST00000582092 TKTP29401 623 aaKnown RBP9.66□□□□□ -0.86
SS18-220ENST00000582092 PPM1AP35813 382 aa9.66□□□□□ -0.86
SS18-220ENST00000582092 RPL21P46778 160 aaKnown RBP9.66□□□□□ -0.86
SS18-220ENST00000582092 RPL34P49207 117 aaKnown RBP9.66□□□□□ -0.86
SS18-220ENST00000582092 ARSEP51690 589 aa9.66□□□□□ -0.86
SS18-220ENST00000582092 CDR1P51861 262 aa9.66□□□□□ -0.86
SS18-220ENST00000582092 PMS2P54278 862 aa9.66□□□□□ -0.86
SS18-220ENST00000582092 VCPP55072 806 aaKnown RBP9.66□□□□□ -0.86
SS18-220ENST00000582092 EIF3BP55884 814 aaKnown RBP9.66□□□□□ -0.86
SS18-220ENST00000582092 BCAR1P56945 870 aa9.66□□□□□ -0.86
SS18-220ENST00000582092 ROR1Q01973 937 aa9.66□□□□□ -0.86
SS18-220ENST00000582092 UBE3AQ05086 875 aa9.66□□□□□ -0.86
SS18-220ENST00000582092 NME3Q13232 169 aa9.66□□□□□ -0.86
SS18-220ENST00000582092 KLF1Q13351 362 aaPredicted RBP9.66□□□□□ -0.86
SS18-220ENST00000582092 TAF5Q15542 800 aa9.66□□□□□ -0.86
SS18-220ENST00000582092 TRADDQ15628 312 aa9.66□□□□□ -0.86
SS18-220ENST00000582092 NFE2Q16621 373 aaPredicted RBP9.66□□□□□ -0.86
SS18-220ENST00000582092 SLC25A52Q3SY17 297 aa9.66□□□□□ -0.86
SS18-220ENST00000582092 GLIPR1L2Q4G1C9 344 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms