RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 POLMQ9NP87 494 aaPredicted RBP23.49■■□□□ 1.35
CASC3-207ENST00000581849 STARD13Q9Y3M8 1113 aa23.49■■□□□ 1.35
CASC3-207ENST00000581849 TBC1D3BA6NDS4 549 aa23.48■■□□□ 1.35
CASC3-207ENST00000581849 XPO1O14980 1071 aaKnown RBP23.48■■□□□ 1.35
CASC3-207ENST00000581849 KLF8O95600 359 aaPredicted RBP23.48■■□□□ 1.35
CASC3-207ENST00000581849 CD44P16070 742 aaKnown RBP23.48■■□□□ 1.35
CASC3-207ENST00000581849 TIE1P35590 1138 aa23.48■■□□□ 1.35
CASC3-207ENST00000581849 MORC3Q14149 939 aa23.48■■□□□ 1.35
CASC3-207ENST00000581849 SGO2Q562F6 1265 aa23.48■■□□□ 1.35
CASC3-207ENST00000581849 PLA2G2CQ5R387 149 aa23.48■■□□□ 1.35
CASC3-207ENST00000581849 PM20D1Q6GTS8 502 aa23.48■■□□□ 1.35
CASC3-207ENST00000581849 TTC30AQ86WT1 665 aa23.48■■□□□ 1.35
CASC3-207ENST00000581849 ARRDC1-AS1Q9H2J1 176 aa23.48■■□□□ 1.35
CASC3-207ENST00000581849 MYO18AQ92614 2054 aaKnown RBP23.48■■□□□ 1.35
CASC3-207ENST00000581849 STC2O76061 302 aa23.47■■□□□ 1.35
CASC3-207ENST00000581849 VDRP11473 427 aa23.47■■□□□ 1.35
CASC3-207ENST00000581849 LIMK1P53667 647 aa23.47■■□□□ 1.35
CASC3-207ENST00000581849 CETN1Q12798 172 aa23.47■■□□□ 1.35
CASC3-207ENST00000581849 CCDC40Q4G0X9 1142 aa23.47■■□□□ 1.35
CASC3-207ENST00000581849 GRAMD4Q6IC98 578 aa23.47■■□□□ 1.35
CASC3-207ENST00000581849 ANO7Q6IWH7 933 aa23.47■■□□□ 1.35
CASC3-207ENST00000581849 TMEM92Q6UXU6 159 aa23.47■■□□□ 1.35
CASC3-207ENST00000581849 SFTPA1Q8IWL2 248 aa23.47■■□□□ 1.35
CASC3-207ENST00000581849 NAT16Q8N8M0 369 aa23.47■■□□□ 1.35
CASC3-207ENST00000581849 MDGA1Q8NFP4 955 aa23.47■■□□□ 1.35
CASC3-207ENST00000581849 OLIG1Q8TAK6 271 aa23.47■■□□□ 1.35
CASC3-207ENST00000581849 BBS2Q9BXC9 721 aa23.47■■□□□ 1.35
CASC3-207ENST00000581849 DCLK3Q9C098 648 aa23.47■■□□□ 1.35
CASC3-207ENST00000581849 HESX1Q9UBX0 185 aa23.47■■□□□ 1.35
CASC3-207ENST00000581849 TSPAN16Q9UKR8 245 aa23.47■■□□□ 1.35
CASC3-207ENST00000581849 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.46■■□□□ 1.35
CASC3-207ENST00000581849 ANTXRLA6NF34 631 aa23.46■■□□□ 1.35
CASC3-207ENST00000581849 PPP1R3GB7ZBB8 358 aa23.46■■□□□ 1.35
CASC3-207ENST00000581849 SGK1O00141 431 aa23.46■■□□□ 1.35
CASC3-207ENST00000581849 MDM4O15151 490 aa23.46■■□□□ 1.35
CASC3-207ENST00000581849 GNA14O95837 355 aa23.46■■□□□ 1.35
CASC3-207ENST00000581849 PAEPP09466 180 aa23.46■■□□□ 1.35
CASC3-207ENST00000581849 SETSIPP0DME0 302 aa23.46■■□□□ 1.35
CASC3-207ENST00000581849 TYRP14679 529 aa23.46■■□□□ 1.35
CASC3-207ENST00000581849 BMP6P22004 513 aa23.46■■□□□ 1.35
CASC3-207ENST00000581849 BST2Q10589 180 aaKnown RBP23.46■■□□□ 1.35
CASC3-207ENST00000581849 GOLGA7BQ2TAP0 167 aa23.46■■□□□ 1.35
CASC3-207ENST00000581849 C12orf50Q8NA57 414 aaPredicted RBP23.46■■□□□ 1.35
CASC3-207ENST00000581849 NT5C1BQ96P26 610 aa23.46■■□□□ 1.35
CASC3-207ENST00000581849 VPS45Q9NRW7 570 aa23.46■■□□□ 1.35
CASC3-207ENST00000581849 NUDT5Q9UKK9 219 aa23.46■■□□□ 1.35
CASC3-207ENST00000581849 NEDD8-MDP1E9PL57 170 aa23.45■■□□□ 1.34
CASC3-207ENST00000581849 ZBED1O96006 694 aa23.45■■□□□ 1.34
CASC3-207ENST00000581849 HNRNPLP14866 589 aaKnown RBP eCLIP23.45■■□□□ 1.34
CASC3-207ENST00000581849 CHKAP35790 457 aa23.45■■□□□ 1.34
CASC3-207ENST00000581849 MPLP40238 635 aa23.45■■□□□ 1.34
CASC3-207ENST00000581849 TKTL1P51854 596 aa23.45■■□□□ 1.34
CASC3-207ENST00000581849 MARSP56192 900 aaKnown RBP23.45■■□□□ 1.34
CASC3-207ENST00000581849 YWHAGP61981 247 aaKnown RBP eCLIP23.45■■□□□ 1.34
CASC3-207ENST00000581849 PDE4CQ08493 712 aa23.45■■□□□ 1.34
CASC3-207ENST00000581849 C10orf76Q5T2E6 689 aa23.45■■□□□ 1.34
CASC3-207ENST00000581849 EMC10Q5UCC4 262 aa23.45■■□□□ 1.34
CASC3-207ENST00000581849 PMS2CLQ68D20 193 aa23.45■■□□□ 1.34
CASC3-207ENST00000581849 ISM2Q6H9L7 571 aa23.45■■□□□ 1.34
CASC3-207ENST00000581849 MIB1Q86YT6 1006 aa23.45■■□□□ 1.34
CASC3-207ENST00000581849 SCML4Q8N228 414 aa23.45■■□□□ 1.34
CASC3-207ENST00000581849 ZNF513Q8N8E2 541 aaPredicted RBP23.45■■□□□ 1.34
CASC3-207ENST00000581849 TRIML1Q8N9V2 468 aa23.45■■□□□ 1.34
CASC3-207ENST00000581849 NELFBQ8WX92 580 aa23.45■■□□□ 1.34
CASC3-207ENST00000581849 DNAJC17Q9NVM6 304 aaKnown RBP23.45■■□□□ 1.34
CASC3-207ENST00000581849 STRIP2Q9ULQ0 834 aa23.45■■□□□ 1.34
CASC3-207ENST00000581849 PLXND1Q9Y4D7 1925 aa23.45■■□□□ 1.34
CASC3-207ENST00000581849 MED19A0JLT2 244 aaPredicted RBP23.44■■□□□ 1.34
CASC3-207ENST00000581849 O00370 1275 aa23.44■■□□□ 1.34
CASC3-207ENST00000581849 ADAM23O75077 832 aa23.44■■□□□ 1.34
CASC3-207ENST00000581849 CD19P15391 556 aa23.44■■□□□ 1.34
CASC3-207ENST00000581849 BYSLQ13895 437 aaKnown RBP23.44■■□□□ 1.34
CASC3-207ENST00000581849 KLHL10Q6JEL2 608 aa23.44■■□□□ 1.34
CASC3-207ENST00000581849 KCTD13Q8WZ19 329 aa23.44■■□□□ 1.34
CASC3-207ENST00000581849 TPSD1Q9BZJ3 242 aa23.44■■□□□ 1.34
CASC3-207ENST00000581849 LRRC4Q9HBW1 653 aa23.44■■□□□ 1.34
CASC3-207ENST00000581849 OLA1Q9NTK5 396 aaKnown RBP23.44■■□□□ 1.34
CASC3-207ENST00000581849 MARCH2Q9P0N8 246 aa23.44■■□□□ 1.34
CASC3-207ENST00000581849 RASAL2Q9UJF2 1139 aa23.44■■□□□ 1.34
CASC3-207ENST00000581849 FBXO10Q9UK96 956 aa23.44■■□□□ 1.34
CASC3-207ENST00000581849 DCLK1O15075 740 aa23.43■■□□□ 1.34
CASC3-207ENST00000581849 GBP1P32455 592 aa23.43■■□□□ 1.34
CASC3-207ENST00000581849 EFEMP1Q12805 493 aa23.43■■□□□ 1.34
CASC3-207ENST00000581849 PAK1Q13153 545 aa23.43■■□□□ 1.34
CASC3-207ENST00000581849 STILQ15468 1287 aa23.43■■□□□ 1.34
CASC3-207ENST00000581849 AASDHQ4L235 1098 aaPredicted RBP23.43■■□□□ 1.34
CASC3-207ENST00000581849 PKDCCQ504Y2 493 aa23.43■■□□□ 1.34
CASC3-207ENST00000581849 LCLAT1Q6UWP7 414 aa23.43■■□□□ 1.34
CASC3-207ENST00000581849 TPGS1Q6ZTW0 290 aa23.43■■□□□ 1.34
CASC3-207ENST00000581849 RSRC2Q7L4I2 434 aaKnown RBP23.43■■□□□ 1.34
CASC3-207ENST00000581849 LMO3Q8TAP4 145 aa23.43■■□□□ 1.34
CASC3-207ENST00000581849 DDX1Q92499 740 aaKnown RBP23.43■■□□□ 1.34
CASC3-207ENST00000581849 SPACA7Q96KW9 195 aa23.43■■□□□ 1.34
CASC3-207ENST00000581849 ULBP1Q9BZM6 244 aa23.43■■□□□ 1.34
CASC3-207ENST00000581849 BCLAF3A2AJT9 711 aaKnown RBP23.42■■□□□ 1.34
CASC3-207ENST00000581849 GADD45BO75293 160 aaPredicted RBP23.42■■□□□ 1.34
CASC3-207ENST00000581849 PENKP01210 267 aaPredicted RBP23.42■■□□□ 1.34
CASC3-207ENST00000581849 KLKB1P03952 638 aa23.42■■□□□ 1.34
CASC3-207ENST00000581849 NTSR1P30989 418 aa23.42■■□□□ 1.34
CASC3-207ENST00000581849 P2RY2P41231 377 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms