RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 COLEC11Q9BWP8 271 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 ADAM33Q9BZ11 813 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 POPDC2Q9HBU9 364 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 CSNK1G1Q9HCP0 422 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 TMEM30AQ9NV96 361 aa15.24■□□□□ 0.03
MKS1-211ENST00000581761 CXXC1Q9P0U4 656 aaPredicted RBP15.24■□□□□ 0.03
MKS1-211ENST00000581761 TANC1Q9C0D5 1861 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 SCN5AQ14524 2016 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 SYNJ2BP-COX16A0A087WUM0 186 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 TBKBP1A7MCY6 615 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 APOL1O14791 398 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 CAPN9O14815 690 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 SYN3O14994 580 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 MCF2LO15068 1137 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 ZBED1O96006 694 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 ITGAVP06756 1048 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 USP17L7P0C7H9 530 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 KLRC2P26717 231 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 ITGA8P53708 1063 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 BCAR1P56945 870 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 EIF3EP60228 445 aaKnown RBP15.23■□□□□ 0.03
MKS1-211ENST00000581761 CAV1Q03135 178 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 UAP1Q16222 522 aaPredicted RBP15.23■□□□□ 0.03
MKS1-211ENST00000581761 RASIP1Q5U651 963 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 OTUD1Q5VV17 481 aaPredicted RBP15.23■□□□□ 0.03
MKS1-211ENST00000581761 IZUMO3Q5VZ72 239 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 GPR153Q6NV75 609 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 LRIG3Q6UXM1 1119 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 PRUNE1Q86TP1 453 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 DCP1BQ8IZD4 617 aaKnown RBP15.23■□□□□ 0.03
MKS1-211ENST00000581761 CCDC185Q8N715 623 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 RIN2Q8WYP3 895 aaPredicted RBP15.23■□□□□ 0.03
MKS1-211ENST00000581761 KCTD15Q96SI1 283 aaPredicted RBP15.23■□□□□ 0.03
MKS1-211ENST00000581761 NPY6RQ99463 290 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 ZNF670Q9BS34 389 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 MRPL9Q9BYD2 267 aaKnown RBP15.23■□□□□ 0.03
MKS1-211ENST00000581761 TXLNGYQ9BZA5 131 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 ZCWPW1Q9H0M4 648 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 DHX35Q9H5Z1 703 aaKnown RBP15.23■□□□□ 0.03
MKS1-211ENST00000581761 COX16Q9P0S2 106 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 ANAPC5Q9UJX4 755 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 AP4E1Q9UPM8 1137 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 PLAAQ9Y263 795 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 FAN1Q9Y2M0 1017 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 ATP8A1Q9Y2Q0 1164 aa15.23■□□□□ 0.03
MKS1-211ENST00000581761 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.22■□□□□ 0.03
MKS1-211ENST00000581761 YJEFN3A6XGL0 299 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 E7ENQ6 273 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 SGK1O00141 431 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 RNF40O75150 1001 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 FGBP02675 491 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 LTFP02788 710 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 OR4Q2P0C623 313 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 PECAM1P16284 738 aaPredicted RBP15.22■□□□□ 0.03
MKS1-211ENST00000581761 IVDP26440 423 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 RDXP35241 583 aaKnown RBP15.22■□□□□ 0.03
MKS1-211ENST00000581761 RFC2P35250 354 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 SLC11A1P49279 550 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 PMS2P54278 862 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 PITX1P78337 314 aaPredicted RBP15.22■□□□□ 0.03
MKS1-211ENST00000581761 DEUP1Q05D60 604 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 DPYSL2Q16555 572 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 SLC39A12Q504Y0 691 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 ANKRD20A8PQ5CZ79 823 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 PPP6R3Q5H9R7 873 aaPredicted RBP15.22■□□□□ 0.03
MKS1-211ENST00000581761 SPDYCQ5MJ68 293 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 C1orf228Q6PIY5 440 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 NPNTQ6UXI9 565 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 Q7L0L9 218 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 OTOP2Q7RTS6 562 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 FAM131BQ86XD5 332 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 VSIG1Q86XK7 387 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 IQCKQ8N0W5 287 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 IRGQQ8WZA9 623 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 SH3GL2Q99962 352 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 VPS18Q9P253 973 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 SAE1Q9UBE0 346 aaPredicted RBP15.22■□□□□ 0.03
MKS1-211ENST00000581761 ADAM28Q9UKQ2 775 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 NAALADL1Q9UQQ1 740 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 A0A0C4DFX4 3053 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 TET1Q8NFU7 2136 aa15.22■□□□□ 0.03
MKS1-211ENST00000581761 ZNF487B1APH4 448 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 GOLGA8KD6RF30 607 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 M0QYT0 321 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 OAZ2O95190 189 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 IFNB1P01574 187 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 ETS1P14921 441 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 TGM2P21980 687 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 IL4RP24394 825 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 CYP2F1P24903 491 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 L1CAMP32004 1257 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 ROR1Q01973 937 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 SLMAPQ14BN4 828 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 NOMO1Q15155 1222 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 P3H1Q32P28 736 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 VARS2Q5ST30 1063 aaKnown RBP15.21■□□□□ 0.03
MKS1-211ENST00000581761 SYPL2Q5VXT5 272 aa15.21■□□□□ 0.03
MKS1-211ENST00000581761 FAM109BQ6ICB4 259 aaPredicted RBP15.21■□□□□ 0.03
MKS1-211ENST00000581761 PSRC1Q6PGN9 363 aaPredicted RBP15.21■□□□□ 0.03
MKS1-211ENST00000581761 RHBDF2Q6PJF5 856 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms