RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 PLIN2Q99541 437 aa14.69□□□□□ -0.06
CSNK1D-219ENST00000581660 BBS2Q9BXC9 721 aa14.69□□□□□ -0.06
CSNK1D-219ENST00000581660 SEMA4CQ9C0C4 833 aa14.69□□□□□ -0.06
CSNK1D-219ENST00000581660 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.69□□□□□ -0.06
CSNK1D-219ENST00000581660 NUMA1Q14980 2115 aa14.69□□□□□ -0.06
CSNK1D-219ENST00000581660 ENC1O14682 589 aa14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 DFNA5O60443 496 aa14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 BRINP1O60477 761 aa14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 RTN3O95197 1032 aaPredicted RBP14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 ZDHHC11BP0C7U3 371 aa14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 C7P10643 843 aa14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 ACTN2P35609 894 aa14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 CTSKP43235 329 aa14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 DGKGP49619 791 aa14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 CLDN6P56747 220 aa14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 ANAPC15P60006 121 aa14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 TBC1D25Q3MII6 688 aa14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 HES3Q5TGS1 186 aa14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 FBXL19Q6PCT2 694 aa14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 NUP93Q8N1F7 819 aa14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 CDK5RAP3Q96JB5 506 aa14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 FAM84AQ96KN4 292 aa14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 TRIM9Q9C026 710 aa14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 ELOVL4Q9GZR5 314 aa14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 CCSER2Q9H7U1 834 aa14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 TM9SF3Q9HD45 589 aa14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 THAP10Q9P2Z0 257 aaPredicted RBP14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 FBXO10Q9UK96 956 aa14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 MYLKQ15746 1914 aa14.68□□□□□ -0.06
CSNK1D-219ENST00000581660 FLNCQ14315 2725 aa14.67□□□□□ -0.06
CSNK1D-219ENST00000581660 PYCARD-AS1I3L0S3 204 aa14.67□□□□□ -0.06
CSNK1D-219ENST00000581660 SLC26A4O43511 780 aa14.67□□□□□ -0.06
CSNK1D-219ENST00000581660 KRT19P08727 400 aa14.67□□□□□ -0.06
CSNK1D-219ENST00000581660 ACO1P21399 889 aaKnown RBP14.67□□□□□ -0.06
CSNK1D-219ENST00000581660 ACADVLP49748 655 aa14.67□□□□□ -0.06
CSNK1D-219ENST00000581660 COPAP53621 1224 aa14.67□□□□□ -0.06
CSNK1D-219ENST00000581660 CCDC173Q0VFZ6 552 aa14.67□□□□□ -0.06
CSNK1D-219ENST00000581660 GNL2Q13823 731 aaKnown RBP14.67□□□□□ -0.06
CSNK1D-219ENST00000581660 MDH1BQ5I0G3 518 aa14.67□□□□□ -0.06
CSNK1D-219ENST00000581660 PRCCQ92733 491 aaPredicted RBP14.67□□□□□ -0.06
CSNK1D-219ENST00000581660 FBXO32Q969P5 355 aa14.67□□□□□ -0.06
CSNK1D-219ENST00000581660 HVCN1Q96D96 273 aa14.67□□□□□ -0.06
CSNK1D-219ENST00000581660 FAM213AQ9BRX8 229 aa14.67□□□□□ -0.06
CSNK1D-219ENST00000581660 IKZF4Q9H2S9 585 aa14.67□□□□□ -0.06
CSNK1D-219ENST00000581660 RBAKQ9NYW8 714 aaPredicted RBP14.67□□□□□ -0.06
CSNK1D-219ENST00000581660 IL37Q9NZH6 218 aa14.67□□□□□ -0.06
CSNK1D-219ENST00000581660 SLC27A6Q9Y2P4 619 aa14.67□□□□□ -0.06
CSNK1D-219ENST00000581660 LRRK2Q5S007 2527 aa14.67□□□□□ -0.06
CSNK1D-219ENST00000581660 MYO9AB2RTY4 2548 aa14.66□□□□□ -0.06
CSNK1D-219ENST00000581660 A0A1B0GTQ1 180 aa14.66□□□□□ -0.06
CSNK1D-219ENST00000581660 FAM92AA1XBS5 289 aa14.66□□□□□ -0.06
CSNK1D-219ENST00000581660 KCNK3O14649 394 aa14.66□□□□□ -0.06
CSNK1D-219ENST00000581660 PPP1R37O75864 691 aa14.66□□□□□ -0.06
CSNK1D-219ENST00000581660 PDGFRBP09619 1106 aa14.66□□□□□ -0.06
CSNK1D-219ENST00000581660 CSRP3P50461 194 aa14.66□□□□□ -0.06
CSNK1D-219ENST00000581660 UCNP55089 124 aa14.66□□□□□ -0.06
CSNK1D-219ENST00000581660 TMPRSS3P57727 454 aa14.66□□□□□ -0.06
CSNK1D-219ENST00000581660 KCNH2Q12809 1159 aa14.66□□□□□ -0.06
CSNK1D-219ENST00000581660 KCNT1Q5JUK3 1230 aa14.66□□□□□ -0.06
CSNK1D-219ENST00000581660 USP49Q70CQ1 688 aa14.66□□□□□ -0.06
CSNK1D-219ENST00000581660 SNRNP27Q8WVK2 155 aaKnown RBP14.66□□□□□ -0.06
CSNK1D-219ENST00000581660 TSC1Q92574 1164 aa14.66□□□□□ -0.06
CSNK1D-219ENST00000581660 TTC9Q92623 222 aa14.66□□□□□ -0.06
CSNK1D-219ENST00000581660 HPDLQ96IR7 371 aa14.66□□□□□ -0.06
CSNK1D-219ENST00000581660 ZNF518BQ9C0D4 1074 aa14.66□□□□□ -0.06
CSNK1D-219ENST00000581660 MTMR12Q9C0I1 747 aa14.66□□□□□ -0.06
CSNK1D-219ENST00000581660 C6orf106Q9H6K1 298 aaPredicted RBP14.66□□□□□ -0.06
CSNK1D-219ENST00000581660 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.66□□□□□ -0.065e-7■■■■■ 34.9
CSNK1D-219ENST00000581660 NME7Q9Y5B8 376 aa14.66□□□□□ -0.06
CSNK1D-219ENST00000581660 SYNCRIPO60506 623 aaKnown RBP14.65□□□□□ -0.06
CSNK1D-219ENST00000581660 TBCAO75347 108 aaKnown RBP14.65□□□□□ -0.06
CSNK1D-219ENST00000581660 IRF1P10914 325 aa14.65□□□□□ -0.06
CSNK1D-219ENST00000581660 IFRD2Q12894 506 aaPredicted RBP14.65□□□□□ -0.06
CSNK1D-219ENST00000581660 ZNF720Q7Z2F6 126 aa14.65□□□□□ -0.06
CSNK1D-219ENST00000581660 ZSWIM2Q8NEG5 633 aa14.65□□□□□ -0.06
CSNK1D-219ENST00000581660 RFFLQ8WZ73 363 aa14.65□□□□□ -0.06
CSNK1D-219ENST00000581660 SNX19Q92543 992 aa14.65□□□□□ -0.06
CSNK1D-219ENST00000581660 CNDP2Q96KP4 475 aaKnown RBP14.65□□□□□ -0.06
CSNK1D-219ENST00000581660 STRA6Q9BX79 667 aa14.65□□□□□ -0.06
CSNK1D-219ENST00000581660 BLOC1S4Q9NUP1 217 aa14.65□□□□□ -0.06
CSNK1D-219ENST00000581660 CHORDC1Q9UHD1 332 aaPredicted RBP14.65□□□□□ -0.06
CSNK1D-219ENST00000581660 DOPEY2Q9Y3R5 2298 aa14.65□□□□□ -0.06
CSNK1D-219ENST00000581660 MYH10P35580 1976 aa14.65□□□□□ -0.06
CSNK1D-219ENST00000581660 SPTAN1Q13813 2472 aaKnown RBP14.64□□□□□ -0.07
CSNK1D-219ENST00000581660 SLC28A2O43868 658 aa14.64□□□□□ -0.07
CSNK1D-219ENST00000581660 TSPAN3O60637 253 aa14.64□□□□□ -0.07
CSNK1D-219ENST00000581660 TACC1O75410 805 aa14.64□□□□□ -0.07
CSNK1D-219ENST00000581660 LDOC1O95751 146 aaPredicted RBP14.64□□□□□ -0.07
CSNK1D-219ENST00000581660 NTRK1P04629 796 aa14.64□□□□□ -0.07
CSNK1D-219ENST00000581660 FAM163BP0C2L3 166 aa14.64□□□□□ -0.07
CSNK1D-219ENST00000581660 TMEM191BP0C7N4 346 aa14.64□□□□□ -0.07
CSNK1D-219ENST00000581660 ACADMP11310 421 aa14.64□□□□□ -0.07
CSNK1D-219ENST00000581660 CD27P26842 260 aa14.64□□□□□ -0.07
CSNK1D-219ENST00000581660 IL9RQ01113 521 aa14.64□□□□□ -0.07
CSNK1D-219ENST00000581660 DNAJC3Q13217 504 aa14.64□□□□□ -0.07
CSNK1D-219ENST00000581660 ILKQ13418 452 aa14.64□□□□□ -0.07
CSNK1D-219ENST00000581660 E2F5Q15329 346 aa14.64□□□□□ -0.07
CSNK1D-219ENST00000581660 ERICH6BQ5W0A0 696 aa14.64□□□□□ -0.07
CSNK1D-219ENST00000581660 LAYNQ6UX15 382 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms