RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 NTHL1P78549 312 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 TEAD2Q15562 447 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 ARHGAP29Q52LW3 1261 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 MSANTD2Q6P1R3 559 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 BHLHA9Q7RTU4 235 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 TMEM150AQ86TG1 271 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 DDX42Q86XP3 938 aaKnown RBP eCLIP14.92□□□□□ -0.02
SKA2-205ENST00000580541 RNF10Q8N5U6 811 aaKnown RBP14.92□□□□□ -0.02
SKA2-205ENST00000580541 MAB21L3Q8N8X9 362 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 ACRBPQ8NEB7 543 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 SHKBP1Q8TBC3 707 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 ZNF564Q8TBZ8 553 aaPredicted RBP14.92□□□□□ -0.02
SKA2-205ENST00000580541 RXFP2Q8WXD0 754 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 EDEM1Q92611 657 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 E2F7Q96AV8 911 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 SERPINB11Q96P15 392 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 MCEEQ96PE7 176 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 DESI2Q9BSY9 194 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 CNPY3Q9BT09 278 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 PACSIN1Q9BY11 444 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 NMUR1Q9HB89 426 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 SLC12A6Q9UHW9 1150 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 CDH7Q9ULB5 785 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 USTQ9Y2C2 406 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 NR2E1Q9Y466 385 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 USP15Q9Y4E8 981 aaPredicted RBP14.92□□□□□ -0.02
SKA2-205ENST00000580541 DOCK6Q96HP0 2047 aa14.92□□□□□ -0.02
SKA2-205ENST00000580541 MYO16Q9Y6X6 1858 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 BRWD1Q9NSI6 2320 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 FAM170AA1A519 330 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 C2CD4BA6NLJ0 364 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 MTA2O94776 668 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 OAS1P00973 400 aaKnown RBP14.91□□□□□ -0.02
SKA2-205ENST00000580541 CKMP06732 381 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 MBL2P11226 248 aaPredicted RBP14.91□□□□□ -0.02
SKA2-205ENST00000580541 PTPN9P43378 593 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 HADHBP55084 474 aaKnown RBP14.91□□□□□ -0.02
SKA2-205ENST00000580541 NNTQ13423 1086 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 TAF5Q15542 800 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 CLUL1Q15846 466 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 PPP1R15BQ5SWA1 713 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 TXNDC8Q6A555 127 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 HFE2Q6ZVN8 426 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 UNC45BQ8IWX7 931 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 CMTM8Q8IZV2 173 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 PLCD3Q8N3E9 789 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.91□□□□□ -0.02
SKA2-205ENST00000580541 SUSD6Q92537 303 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 KHSRPQ92945 711 aaKnown RBP eCLIP14.91□□□□□ -0.029e-7■■■■□ 21.9
SKA2-205ENST00000580541 TCEAL4Q96EI5 215 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 KCNF1Q9H3M0 494 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 MARCH2Q9P0N8 246 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 ANAPC7Q9UJX3 599 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 NAALADL1Q9UQQ1 740 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 PPP2R2CQ9Y2T4 447 aa14.91□□□□□ -0.02
SKA2-205ENST00000580541 HBS1LQ9Y450 684 aaKnown RBP14.91□□□□□ -0.02
SKA2-205ENST00000580541 DPYSL4O14531 572 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 ATMINO43313 823 aaPredicted RBP14.9□□□□□ -0.02
SKA2-205ENST00000580541 COCHO43405 550 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 MBTPS2O43462 519 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 TRUB2O95900 331 aaKnown RBP14.9□□□□□ -0.02
SKA2-205ENST00000580541 PSMA2P25787 234 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 GBP2P32456 591 aaPredicted RBP14.9□□□□□ -0.02
SKA2-205ENST00000580541 CCR2P41597 374 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 RPL7AP62424 266 aaKnown RBP14.9□□□□□ -0.02
SKA2-205ENST00000580541 SLC7A9P82251 487 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 CYP4F8P98187 520 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 EFEMP1Q12805 493 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 SLC5A9Q2M3M2 681 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 ACBD5Q5T8D3 534 aaPredicted RBP14.9□□□□□ -0.02
SKA2-205ENST00000580541 GET4Q7L5D6 327 aaPredicted RBP14.9□□□□□ -0.02
SKA2-205ENST00000580541 STRADAQ7RTN6 431 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 DNAAF5Q86Y56 855 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 ARL14EPQ8N8R7 260 aaPredicted RBP14.9□□□□□ -0.02
SKA2-205ENST00000580541 ITFG1Q8TB96 612 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 FGF13Q92913 245 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 RNF34Q969K3 372 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 NT5C3BQ969T7 300 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 ARHGEF26Q96DR7 871 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 PGAP3Q96FM1 320 aaPredicted RBP14.9□□□□□ -0.02
SKA2-205ENST00000580541 SLC46A2Q9BY10 475 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 DCLK3Q9C098 648 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 SMOC2Q9H3U7 446 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 CCSER2Q9H7U1 834 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 FAM204AQ9H8W3 233 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 KIF9Q9HAQ2 790 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 TDP1Q9NUW8 608 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.9□□□□□ -0.02
SKA2-205ENST00000580541 OSER1Q9NX31 292 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 TLR6Q9Y2C9 796 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 ZNF510Q9Y2H8 683 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 REXO2Q9Y3B8 237 aaKnown RBP14.9□□□□□ -0.02
SKA2-205ENST00000580541 DENND4CQ5VZ89 1909 aa14.9□□□□□ -0.02
SKA2-205ENST00000580541 C2orf16Q68DN1 1984 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 C2orf78A6NCI8 922 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 M0QYT0 321 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 MOSPD3O75425 235 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 TADA3O75528 432 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 OLFM2O95897 454 aa14.89□□□□□ -0.03
SKA2-205ENST00000580541 FYNP06241 537 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms