RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 CDC25CP30307 473 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 CASQ1P31415 396 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 RDXP35241 583 aaKnown RBP17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 PGFP49763 221 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 ATP11AP98196 1134 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 SLC25A11Q02978 314 aaKnown RBP17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 NNTQ13423 1086 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 CDO1Q16878 200 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 ZNF697Q5TEC3 545 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 LRRC38Q5VT99 294 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 CC2D1AQ6P1N0 951 aaPredicted RBP17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 TMEM184AQ6ZMB5 413 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 POLNQ7Z5Q5 900 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 TAC4Q86UU9 113 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 CPNE8Q86YQ8 564 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 VN1R2Q8NFZ6 395 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 RNF139Q8WU17 664 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 EDEM1Q92611 657 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 SERPINB11Q96P15 392 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 TLR10Q9BXR5 811 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 LRRC3Q9BY71 257 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 ADAM33Q9BZ11 813 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 FAM204AQ9H8W3 233 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 TRPM5Q9NZQ8 1165 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 USTQ9Y2C2 406 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 HYOU1Q9Y4L1 999 aa17.45■□□□□ 0.38
CDK5RAP3-215ENST00000579780 M0QYT0 321 aa17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 IRAK2O43187 625 aa17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 TLR5O60602 858 aa17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 TRUB2O95900 331 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 ATP1A1P05023 1023 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 RARGP13631 454 aa17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 POU3F3P20264 500 aaPredicted RBP17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 HDAC4P56524 1084 aa17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 RPS6KA1Q15418 735 aa17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 HADHQ16836 314 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 PABPC1LQ4VXU2 614 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 TCEAL5Q5H9L2 206 aa17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 PAPD7Q5XG87 772 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 KLHDC10Q6PID8 442 aa17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 RSRC2Q7L4I2 434 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 RHOT1Q8IXI2 618 aa17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 ARFGAP1Q8N6T3 406 aa17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 UBL4BQ8N7F7 174 aa17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 EFHBQ8N7U6 833 aa17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 GCNAQ96QF7 691 aa17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 PRKD2Q9BZL6 878 aa17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 PRDM12Q9H4Q4 367 aa17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 MYO9BQ13459 2157 aa17.44■□□□□ 0.38
CDK5RAP3-215ENST00000579780 SPDYE4A6NLX3 237 aa17.43■□□□□ 0.38
CDK5RAP3-215ENST00000579780 ENC1O14682 589 aa17.43■□□□□ 0.38
CDK5RAP3-215ENST00000579780 NCK2O43639 380 aa17.43■□□□□ 0.38
CDK5RAP3-215ENST00000579780 F9P00740 461 aa17.43■□□□□ 0.38
CDK5RAP3-215ENST00000579780 F11P03951 625 aa17.43■□□□□ 0.38
CDK5RAP3-215ENST00000579780 PFKLP17858 780 aa17.43■□□□□ 0.38
CDK5RAP3-215ENST00000579780 TFE3P19532 575 aaPredicted RBP17.43■□□□□ 0.38
CDK5RAP3-215ENST00000579780 MIPP30301 263 aa17.43■□□□□ 0.38
CDK5RAP3-215ENST00000579780 TAS2R40P59535 323 aa17.43■□□□□ 0.38
CDK5RAP3-215ENST00000579780 PITX1P78337 314 aaPredicted RBP17.43■□□□□ 0.38
CDK5RAP3-215ENST00000579780 HYAL1Q12794 435 aa17.43■□□□□ 0.38
CDK5RAP3-215ENST00000579780 EIF4EBP2Q13542 120 aaPredicted RBP17.43■□□□□ 0.38
CDK5RAP3-215ENST00000579780 HECTD3Q5T447 861 aa17.43■□□□□ 0.38
CDK5RAP3-215ENST00000579780 DAB2IPQ5VWQ8 1189 aa17.43■□□□□ 0.38
CDK5RAP3-215ENST00000579780 TMEM150AQ86TG1 271 aa17.43■□□□□ 0.38
CDK5RAP3-215ENST00000579780 KIF18AQ8NI77 898 aa17.43■□□□□ 0.38
CDK5RAP3-215ENST00000579780 ZNF707Q96C28 371 aaPredicted RBP17.43■□□□□ 0.38
CDK5RAP3-215ENST00000579780 DDIT4Q9NX09 232 aa17.43■□□□□ 0.38
CDK5RAP3-215ENST00000579780 PACSIN2Q9UNF0 486 aaPredicted RBP17.43■□□□□ 0.38
CDK5RAP3-215ENST00000579780 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.43■□□□□ 0.38
CDK5RAP3-215ENST00000579780 PCDHA3Q9Y5H8 950 aa17.43■□□□□ 0.38
CDK5RAP3-215ENST00000579780 HELZP42694 1942 aaKnown RBP17.43■□□□□ 0.38
CDK5RAP3-215ENST00000579780 C2orf16Q68DN1 1984 aa17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 SOX1O00570 391 aaPredicted RBP17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 DDX3YO15523 660 aaKnown RBP17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 PRPSAP2O60256 369 aa17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 GLP2RO95838 553 aa17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 OAS1P00973 400 aaKnown RBP17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 KRT7P08729 469 aa17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 PTPN2P17706 415 aa17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 TCP1P17987 556 aaKnown RBP17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 GABRR2P28476 465 aa17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 GBP1P32455 592 aa17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 AIF1P55008 147 aa17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 AMPD2Q01433 879 aa17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 DEUP1Q05D60 604 aa17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 GRIN2CQ14957 1233 aa17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 SH3PXD2AQ5TCZ1 1133 aa17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 TEKT4Q8WW24 435 aa17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 KRT35Q92764 455 aa17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 NTAN1Q96AB6 310 aa17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 CORO1BQ9BR76 489 aa17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 CARD9Q9H257 536 aa17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 WDR6Q9NNW5 1121 aaKnown RBP17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 PIGVQ9NUD9 493 aa17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 CALCOCO1Q9P1Z2 691 aa17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 USP18Q9UMW8 372 aa17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 SNX12Q9UMY4 172 aa17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 NOTCH4Q99466 2003 aa17.42■□□□□ 0.38
CDK5RAP3-215ENST00000579780 CDH23Q9H251 3354 aa17.41■□□□□ 0.38
CDK5RAP3-215ENST00000579780 CES2O00748 559 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms