RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 C8orf48Q96LL4 319 aa13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 CEP295NLQ96MC4 621 aa13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 PARVGQ9HBI0 331 aa13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 PLK2Q9NYY3 685 aa13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 KCND2Q9NZV8 630 aa13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 WDR35Q9P2L0 1181 aa13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 ODF2LQ9ULJ1 636 aa13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 R3HCC1Q9Y3T6 440 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 PCDHGA1Q9Y5H4 931 aa13.99□□□□□ -0.17
CDK5RAP3-213ENST00000579605 MGAQ8IWI9 3026 aa13.98□□□□□ -0.17
CDK5RAP3-213ENST00000579605 CACNG3O60359 315 aa13.98□□□□□ -0.17
CDK5RAP3-213ENST00000579605 FSBPO95073 299 aa13.98□□□□□ -0.17
CDK5RAP3-213ENST00000579605 CISD3P0C7P0 127 aa13.98□□□□□ -0.17
CDK5RAP3-213ENST00000579605 TRAPPC10P48553 1259 aa13.98□□□□□ -0.17
CDK5RAP3-213ENST00000579605 TBC1D25Q3MII6 688 aa13.98□□□□□ -0.17
CDK5RAP3-213ENST00000579605 ERICH6BQ5W0A0 696 aa13.98□□□□□ -0.17
CDK5RAP3-213ENST00000579605 ERICH1Q86X53 443 aa13.98□□□□□ -0.17
CDK5RAP3-213ENST00000579605 EID2Q8N6I1 236 aa13.98□□□□□ -0.17
CDK5RAP3-213ENST00000579605 FBXO18Q8NFZ0 1043 aa13.98□□□□□ -0.17
CDK5RAP3-213ENST00000579605 KBTBD7Q8WVZ9 684 aa13.98□□□□□ -0.17
CDK5RAP3-213ENST00000579605 SAAL1Q96ER3 474 aa13.98□□□□□ -0.17
CDK5RAP3-213ENST00000579605 TCHHQ07283 1943 aa13.98□□□□□ -0.17
CDK5RAP3-213ENST00000579605 CLDN5O00501 218 aa13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 ITGAVP06756 1048 aa13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 GLDCP23378 1020 aa13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 ACSL1P33121 698 aa13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 CSRP3P50461 194 aa13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 TOB1P50616 345 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 TMPRSS3P57727 454 aa13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 GTF2BQ00403 316 aa13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 PKDCCQ504Y2 493 aa13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 COLEC12Q5KU26 742 aa13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 FBXL19Q6PCT2 694 aa13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 NUP93Q8N1F7 819 aa13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 MYCBPAPQ8TBZ2 947 aa13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 KCNN1Q92952 543 aa13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 ZSCAN31Q96LW9 406 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 MMS19Q96T76 1030 aa13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 TMEM30AQ9NV96 361 aa13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 NXF1Q9UBU9 619 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 IL17BQ9UHF5 180 aa13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 SIX4Q9UIU6 781 aa13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 ITGA11Q9UKX5 1188 aa13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 STYXL1Q9Y6J8 313 aa13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 SPTA1P02549 2419 aa13.97□□□□□ -0.17
CDK5RAP3-213ENST00000579605 ATMQ13315 3056 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 PTPRJQ12913 1337 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 GOLGA8IPA6NC78 632 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 GOLGA8JA6NMD2 632 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 LAD1O00515 517 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 C1SP09871 688 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 ABCB4P21439 1286 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 SCP2P22307 547 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 ADSSP30520 456 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 CTSKP43235 329 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 GRIA4P48058 902 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 ACADVLP49748 655 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 COPAP53621 1224 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 CDH8P55286 799 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 C21orf59P57076 290 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 HYIQ5T013 277 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 ZNF248Q8NDW4 579 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 PDZD8Q8NEN9 1154 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 SCAMP5Q8TAC9 235 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 CXorf38Q8TB03 319 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 HPDLQ96IR7 371 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 ZNF518BQ9C0D4 1074 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 MTMR12Q9C0I1 747 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 SNX25Q9H3E2 840 aa13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 RBAKQ9NYW8 714 aaPredicted RBP13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.96□□□□□ -0.17
CDK5RAP3-213ENST00000579605 A0A1B0GTQ1 180 aa13.95□□□□□ -0.18
CDK5RAP3-213ENST00000579605 RTN3O95197 1032 aaPredicted RBP13.95□□□□□ -0.18
CDK5RAP3-213ENST00000579605 TBX18O95935 607 aa13.95□□□□□ -0.18
CDK5RAP3-213ENST00000579605 TMEM191BP0C7N4 346 aa13.95□□□□□ -0.18
CDK5RAP3-213ENST00000579605 CDK4P11802 303 aa13.95□□□□□ -0.18
CDK5RAP3-213ENST00000579605 GNL1P36915 607 aaPredicted RBP13.95□□□□□ -0.18
CDK5RAP3-213ENST00000579605 POU5F1Q01860 360 aaKnown RBP13.95□□□□□ -0.18
CDK5RAP3-213ENST00000579605 ORC1Q13415 861 aa13.95□□□□□ -0.18
CDK5RAP3-213ENST00000579605 POSTNQ15063 836 aa13.95□□□□□ -0.18
CDK5RAP3-213ENST00000579605 KDM7AQ6ZMT4 941 aa13.95□□□□□ -0.18
CDK5RAP3-213ENST00000579605 HTR3DQ70Z44 454 aa13.95□□□□□ -0.18
CDK5RAP3-213ENST00000579605 DPH6Q7L8W6 267 aa13.95□□□□□ -0.18
CDK5RAP3-213ENST00000579605 BRSK2Q8IWQ3 736 aa13.95□□□□□ -0.18
CDK5RAP3-213ENST00000579605 TTC9Q92623 222 aa13.95□□□□□ -0.18
CDK5RAP3-213ENST00000579605 BIRC7Q96CA5 298 aa13.95□□□□□ -0.18
CDK5RAP3-213ENST00000579605 MED8Q96G25 268 aa13.95□□□□□ -0.18
CDK5RAP3-213ENST00000579605 FIZ1Q96SL8 496 aa13.95□□□□□ -0.18
CDK5RAP3-213ENST00000579605 MRPL45Q9BRJ2 306 aaKnown RBP13.95□□□□□ -0.18
CDK5RAP3-213ENST00000579605 PDE11AQ9HCR9 933 aa13.95□□□□□ -0.18
CDK5RAP3-213ENST00000579605 THAP10Q9P2Z0 257 aaPredicted RBP13.95□□□□□ -0.18
CDK5RAP3-213ENST00000579605 PIEZO2Q9H5I5 2752 aa13.94□□□□□ -0.18
CDK5RAP3-213ENST00000579605 KNTC1P50748 2209 aa13.94□□□□□ -0.18
CDK5RAP3-213ENST00000579605 TBCAO75347 108 aaKnown RBP13.94□□□□□ -0.18
CDK5RAP3-213ENST00000579605 IGLV3-19P01714 112 aa13.94□□□□□ -0.18
CDK5RAP3-213ENST00000579605 EPHX1P07099 455 aa13.94□□□□□ -0.18
CDK5RAP3-213ENST00000579605 PTPN1P18031 435 aaKnown RBP13.94□□□□□ -0.18
CDK5RAP3-213ENST00000579605 WARSP23381 471 aaKnown RBP13.94□□□□□ -0.18
CDK5RAP3-213ENST00000579605 PRPHP41219 470 aa13.94□□□□□ -0.18
CDK5RAP3-213ENST00000579605 ZNF131P52739 623 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms